Ggra5839.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5839.t1
Unique NameGgra5839.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length869
Homology
BLAST of Ggra5839.t1 vs. uniprot
Match: A0A2V3J3A3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A3_9FLOR)

HSP 1 Score: 582 bits (1499), Expect = 3.010e-192
Identity = 442/872 (50.69%), Postives = 558/872 (63.99%), Query Frame = 0
Query:    1 MAPPQAFVAPVILRNVSHRRPQSLSRRVVRAPCVASRTLFMTAAPGPNQEQQQQPTIVDASDFNDTAPKNRADPVLNVESDGVDLLVGHSSPPISPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPKNTSVKLSPEDVETARKAREAAMKAAEAKNEAEKETQKRVLARAQQLCTTVGTRTKAFELGQRARAALDVALQNAQTEAEKDGVDTQTKLRASASKAVEALGKAAENGWNSATVPWLKKNVLPPVFEEVAPATVAASTLAVVLTLVALPSLFSGGQPAKEYLRNQLDAETAGLEKKLQRQRNLSGTYGGRSLTQNDLFPPSQEQEFGSRSSTATSPEQAPSRGKTGTAVPSVGSNSLSFSEKAEILPPTP------PKPAPESTXXXXXXXXXXXXXXXSLSLADVSPSMAMSKVAKALNSQSSLVLSASFDSLKAEPTIVFEVSRAYHGLPVPEQKMLARSILASAQSLGYSNISLIEQGTGIEVAHAGVDVLLEDETENLRAELANFRKLSNKLAIQAAEQEVEIDKLQDRILEERNQFAQERSELGNSVKSLRTENAGLLEDLGSANAEISKIPERVELEQRTLEAERYAERMGDSVEMLSMQLTKARTEEAQAKQSQAAALTVADEANAEKDAAIASVSKEIEKAQKEAESKXXXXXXXXXXXXXXXXXXXXXQVLLLQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSVQATYEGRLEELQXRXXXXXXXXXXXXXKTLSVXXXXXSANISALTKERDQAKKEIELVEAKAEKAGNKALKEKEALQSRVSKLEAKLKEKVPTTSQEELKEAVEPV 866
            MAP QAF+AP+I+ +   R    LS RV R P +A+R+L M A    N + + QP+IVDA+DF+   P     P   VE+  VD +V  SS PI+P                 XXXXX                       XXXXXXXXXXXXXXXXXX  TS K T + LS E VE AR AR+ A K AE  + A KE Q+R+LARAQQ+C+ VGTRT+ FELG+RAR +LD ALQ AQT AEKD V+TQ KLRASA+KA +ALGKA  NGWN++TVPWLKKNVLP  FE V P  VAA+TLA +LT+VA+PSLFS GQPAK+  + QL+A+TA LEKKLQ+QR++S  YGGRS TQ++LFPP QE +      T + P+ + +  +      +  ++ ++ +EK +     P      PKP+P  +                 ++ADV+PSM M+ V+K L S +SLVLS+SFD+L+AEPTIV EVS+AYH LP  EQK +A+ +LASAQSLGY  +SL+E G GIEVAHAGVDV LEDE ENLRAELA  R +S KLA++ A  E EI KL++R+LEERNQFA +++EL  SV SLR EN GL++D+ +AN+EISK+P+R ELEQRTLEAE+ AE+  DSV+M+S+Q+ KAR  EA+AKQS+  AL   ++AN E+D+A+ASVS++IEKAQ++    XXXXXXXXXXXX         +V  L+ K                            XXXXXX      YE  L+E  X XXXXXXXXXXXXX     XXXXX          RDQAKKEIE +E       +K  +EK+ALQSR+SKLE KLKEK+   S   + EA E V
Sbjct:    1 MAPQQAFIAPLIVPSAFQRGSHRLSTRVTRPPAIATRSLSMVAEADSNTQSKPQPSIVDAADFDAGPPPKHLAPDPGVEAAVVDEVVDQSSKPITPIASDATKFDSPQPSESTXXXXXVTPESSERQQILQKQIKEPESSKXXXXXXXXXXXXXXXXXXKPTSTKAT-ITLSTEQVEKARLARKEAEKKAENDSGARKEQQQRILARAQQICSAVGTRTRTFELGERARTSLDSALQTAQTAAEKDDVNTQAKLRASAAKAAQALGKAIGNGWNTSTVPWLKKNVLPEAFESVTPPAVAATTLAALLTIVAIPSLFSAGQPAKQAPKKQLEADTAALEKKLQKQRSVSSAYGGRSKTQSELFPPPQEPQQALSIKTQSPPKPSDTTSRVTEPSTTTTASRVASAEKTDTTVAAPSTSESTPKPSPTQSKVATAPVPAVP------AIADVTPSMVMTSVSKGLGSNASLVLSSSFDTLEAEPTIVLEVSKAYHKLPALEQKRIAQVVLASAQSLGYQRVSLVESGNGIEVAHAGVDVRLEDENENLRAELAAMRAVSEKLAVRTANNEAEIAKLEERLLEERNQFAGQKTELEKSVASLRAENTGLMDDIAAANSEISKMPDRFELEQRTLEAEQKAEKFSDSVDMMSIQVAKARQAEAEAKQSERGALRAVEDANKERDSALASVSQKIEKAQRDXXXXXXXXXXXXXXXXQVVKEDSEKKVATLEGKLQDSENQSARVLADTSNSYEKQLEKEKAXXXXXXXXXXQKYENLLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQAKKEIEXLEXXXXXXASKTQREKDALQSRISKLEMKLKEKLVAQSNSIIPEAQEAV 865          
BLAST of Ggra5839.t1 vs. uniprot
Match: R7QEH5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEH5_CHOCR)

HSP 1 Score: 248 bits (634), Expect = 3.470e-69
Identity = 214/541 (39.56%), Postives = 299/541 (55.27%), Query Frame = 0
Query:  330 LDAETAGLEKKLQRQRNLSGTYGG--RSLTQNDLFPPSQEQEFGSRSSTATSPEQAPSRGKTGTAVPSVGSNSLSFSEKAEILPPTPPKPAPESTXXXXXXXXXXXXXXXSLSLADVSPSMAMSKVAKALNSQSSLVLSASFDSLKAEPTIVFEVSRAYHGLPVPEQKMLARSILASAQSLGYSNISLIEQGTGIEVAHAGVDVLLEDETENLRAELANFRKLSNKLAIQAAEQEVEIDKLQDRILEERNQFAQERSELGNSVKSLRTENAGLLEDLGSANAEISKIPERVELEQRTLEAERYAERMGDSVEMLSMQLTKARTEEAQAKQSQAAALTVADEANAEKDAAIASVSKEIEKAQKEAESKXXXXXXXXXXXXXXXXXXXXXQVLLLQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSVQATYEGRLEELQXRXXXXXXXXXXXXXKTLSVXXXXXSANISALTKERDQAKKEIELVEAKAEKAGNKALKEKEALQSRVSKLEAKLKEKVPTTSQEELKEAVEPVAN 868
            LDA+TA LEK+LQR R+   +Y    RS     +FPP  +     +++  + P  AP   K   A P   S + S    A        +  PES+ XXXXXXXXX      L   DV+P + +S V+KAL S + +V SASFDSL A+PT+V EVS+A+H LP  EQ+ +A + L + + LGY  +S IE GTG+EVAHAG+D+ LEDE ENLRA+LA  RK  +KLA     QE EID L+ R+ EER++F  +R EL   +K+++ EN GLL DL  A  EISK+P+R+ LE+RT+EAE+ +E++ D+VEMLS QLT AR +EA+AKQ +  +L    +A   K  A+ASV+ EIE+A+  A  K                     +V  +++                                   +S+Q  YEG L ++Q +       XXXXXX     XXXXX            QA KE   VE++ EK   KA +E++ L+++++KLEAKLK    TT+Q + +  V+  AN
Sbjct:    2 LDADTAVLEKRLQRDRSSPSSYSASSRSSAGRGVFPPEDKTPALPKAAEVSKP--APLTPKA--AEPKTQSFADSTKPAAPSTSAVTLQKPPESSTXXXXXXXXXTQPEP-LKKVDVTPPLVLSTVSKALGSNAGIVSSASFDSLSADPTVVLEVSKAFHRLPDAEQRKIADTALKATRPLGYERVSFIEAGTGMEVAHAGIDIDLEDEEENLRAQLAATRKQGDKLASANTNQEAEIDTLKTRLDEERDEFVAKRIELERQIKNMQQENGGLLADLAEAKEEISKMPDRLALEERTVEAEKKSEKLTDTVEMLSKQLTVARDDEARAKQVEQESLQAVKQAEKVKSDALASVAGEIEQAKDNANRKATQDIAEARQDAQTAMEASNKRVSEIENSAAVAQRESGKHLEDTTRSYEQRLQEEQKAKSVEVKSIQDKYEGLLVDMQKKASAELEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAKETAKVESRLEKDSMKAARERDGLKAKIAKLEAKLKG--DTTAQPKTEVEVKEEAN 535          
The following BLAST results are available for this feature:
BLAST of Ggra5839.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3A33.010e-19250.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEH53.470e-6939.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 327..347
NoneNo IPR availableCOILSCoilCoilcoord: 794..846
NoneNo IPR availableCOILSCoilCoilcoord: 761..788
NoneNo IPR availableCOILSCoilCoilcoord: 710..730
NoneNo IPR availableCOILSCoilCoilcoord: 590..610
NoneNo IPR availableCOILSCoilCoilcoord: 533..585
NoneNo IPR availableCOILSCoilCoilcoord: 179..209
NoneNo IPR availableCOILSCoilCoilcoord: 670..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..434

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:99424..102030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5839.t1Ggra5839.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 99424..102030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5839.t1 ID=Ggra5839.t1|Name=Ggra5839.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=869bp
MAPPQAFVAPVILRNVSHRRPQSLSRRVVRAPCVASRTLFMTAAPGPNQE
QQQQPTIVDASDFNDTAPKNRADPVLNVESDGVDLLVGHSSPPISPPPEE
PKLENQQKTESLKTESLKTESLKTESLKTESLKTESLETESLKTEDESEQ
KPPAEGSPADETSPKNTSVKLSPEDVETARKAREAAMKAAEAKNEAEKET
QKRVLARAQQLCTTVGTRTKAFELGQRARAALDVALQNAQTEAEKDGVDT
QTKLRASASKAVEALGKAAENGWNSATVPWLKKNVLPPVFEEVAPATVAA
STLAVVLTLVALPSLFSGGQPAKEYLRNQLDAETAGLEKKLQRQRNLSGT
YGGRSLTQNDLFPPSQEQEFGSRSSTATSPEQAPSRGKTGTAVPSVGSNS
LSFSEKAEILPPTPPKPAPESTTPPTPSNVTPTPPAPSLSLADVSPSMAM
SKVAKALNSQSSLVLSASFDSLKAEPTIVFEVSRAYHGLPVPEQKMLARS
ILASAQSLGYSNISLIEQGTGIEVAHAGVDVLLEDETENLRAELANFRKL
SNKLAIQAAEQEVEIDKLQDRILEERNQFAQERSELGNSVKSLRTENAGL
LEDLGSANAEISKIPERVELEQRTLEAERYAERMGDSVEMLSMQLTKART
EEAQAKQSQAAALTVADEANAEKDAAIASVSKEIEKAQKEAESKADQVIA
ATKKEAESVKVESEKQVLLLQDKLQESQKQAAKTLEDTTASYEKQLEGEK
VRNEKQVQSVQATYEGRLEELQKRLKAELDAFRKEADKTLSVTKKEASAN
ISALTKERDQAKKEIELVEAKAEKAGNKALKEKEALQSRVSKLEAKLKEK
VPTTSQEELKEAVEPVAN*
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