Ggra5838.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5838.t1
Unique NameGgra5838.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Homology
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A2V3J3V9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR)

HSP 1 Score: 452 bits (1162), Expect = 2.480e-155
Identity = 226/296 (76.35%), Postives = 261/296 (88.18%), Query Frame = 0
Query:  180 KDLSPVDKQYLEKVRARLARRRRIAEAAINGDAPDMADDDVSMTANLPDDIDQMDDILFDRAPNNVNQVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVPSLDDEPSPKASAILTTNFGPLRTAHVDKKPEPYSLEWYMEKERPPKVASDNSVLEAIFVTVAIFGTLAFMYGSS 475
            K +S VDKQYL+K+RARL RRRR+AEAA  GD  +  D++ SMTA+LPDDIDQMDDILFDRAPNNVNQVKLFGAWLDDA+AGRKAR+NLTPTD AV+GS+ +DASVQSHK+ ++SAEEAVE SS+IFA GMT+FNKG YRQ+ + F+EA  +VG GSRLGGQYQLW+AQSLDAAGDK  AA LL+ LRMHAD DVRKVSRELHFI+TAPALEL PG+F EVPS+DDEPSPK++AILT+NFGPL+TA VDKKPEPYSLEWYMEKERPPKV +DNS +EA  +T AIFGTLAFM+ SS
Sbjct:    9 KGMSQVDKQYLDKIRARLTRRRRVAEAAARGDFSENGDEEASMTASLPDDIDQMDDILFDRAPNNVNQVKLFGAWLDDALAGRKARKNLTPTDKAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVRKVSRELHFIITAPALELAPGTFFEVPSIDDEPSPKSAAILTSNFGPLKTARVDKKPEPYSLEWYMEKERPPKV-TDNSAMEAALITFAIFGTLAFMFTSS 303          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A7S2ZV28 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZV28_9RHOD)

HSP 1 Score: 147 bits (372), Expect = 3.210e-37
Identity = 101/282 (35.82%), Postives = 146/282 (51.77%), Query Frame = 0
Query:  191 EKVRARLARRRRIAEAAINGDAPDMADD-----DVSMTANLPDDIDQMDDILFDRAPNNVNQVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVPSLDDEPSPKASAILTTNF---GPLRTAHVDKKPEPYSLEWYMEKERPPKVASDNSVLEAIFVTVAI 464
            E+ R   A  RR  E  + G +   A D     +V   + +PDD+D++DDI  +R PN+  +V ++GAWLD++VAGRK  +                         T    EA E    IF  G+ LF +G Y++A      A  + G  SR GGQYQLW  Q+LDAAG+K  A   LQ L+ H D DVRKV+ E+ FI+TAP L L   +F+ + +       K+  +L  N      + TA + K PE YSLEW++EK+  P+ A D+++ +A    V +
Sbjct:   39 ERERQANADYRRKVEERLRGTSSIGAVDLESKGEVDYLSGIPDDLDELDDIAMNRGPNDQGKVAMWGAWLDESVAGRKVGK-------------------------TTQQAEAEE----IFRVGLDLFERGRYKEATKELTAACLLAGVNSREGGQYQLWLGQALDAAGEKKKAIACLQTLKSHRDSDVRKVADEVLFIITAPPLNLGKENFVSIET------GKSYEVLQKNGRRRSSIPTAVIPKGPEKYSLEWFLEKK--PEAAPDDNLDKAAVAAVVL 283          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A1X6NQQ7 (IU_nuc_hydro domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQQ7_PORUM)

HSP 1 Score: 125 bits (314), Expect = 5.160e-28
Identity = 72/154 (46.75%), Postives = 90/154 (58.44%), Query Frame = 0
Query:    9 VPPFVGSYYALMDQVDAGFDHTLMRMSYRNYILFGPGRILYSDVMCGMAQFLPQRKRAYDIHKTPDQDDTSIPALLKHLDRTKPLEKITFLSIGTLTPFALIFSEKHIRNAKSVLRRVDGLHIMGGAVNVKGNIFSSTTNNKAEFNMFGDPDGA 162
            VP  +GS+ AL D+ DA       R+ YR+ I  GP   LY+D + G A  LPQ  RAYD+  TPD DD SIPALL  L       +I +LS+GTLT  A +F   +      +L R+  L IMGGAV+V GN+FS   N  AEFNM+ DP GA
Sbjct:   84 VPVLIGSHVALSDERDANGTGLGPRLRYRDTIPVGPDGFLYADTVWGAAHLLPQSFRAYDVEGTPDTDDQSIPALLAVLAGLPIGRRIEWLSVGTLTMVAKLFRPPYAAALAPLLPRIQSLTIMGGAVDVAGNLFSLPNNTVAEFNMYNDPLGA 237          
BLAST of Ggra5838.t1 vs. uniprot
Match: M2X0I2 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X0I2_GALSU)

HSP 1 Score: 122 bits (305), Expect = 9.860e-28
Identity = 89/244 (36.48%), Postives = 121/244 (49.59%), Query Frame = 0
Query:  243 NNVNQVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKE---PTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFL-----EVPSLDDEPSPKASAILTTN---FGPLRTAHVDKKPEPYSLEWYMEKERPP-KVASDNSVLEAIFVTVAIFGTLAFMYGS 474
            +  N+V  FGAWLD+ +AG                    DA +Q  +    PT S     +++ S F  G+  F+ G Y  A ++F +A       SR GGQYQLW AQ+L AAG + TA   LQKL+ H D DVRK S++L +I+ AP L+L+   F+     +VP   +     A+   T N   F     A V K PE YSLEW+++KE PP  V+  N+ L     T  I   L F Y S
Sbjct:   71 SETNKVYRFGAWLDEHIAG--------------------DALLQCERNCHIPTDSTVTRQQQAYSFFCCGVKEFDVGCYDAAANWFHKATVYGDPSSRTGGQYQLWTAQALHAAGKRDTAKNALQKLKYHKDRDVRKASQQLLYILGAPQLKLDASHFIYIATAKVPVTKNREKKVATHPGTYNCVDFVKDNYAFVQKTPEKYSLEWFVQKEPPPHSVSRMNTNLVLTLATTIIVSMLVFFYHS 294          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A7S0BJX9 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJX9_9RHOD)

HSP 1 Score: 103 bits (257), Expect = 8.330e-23
Identity = 59/155 (38.06%), Postives = 83/155 (53.55%), Query Frame = 0
Query:  224 ANLPDDIDQMDDILFDRAPNNVNQVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVS 378
            + +P+D+D++DDI  +R P +  +V ++GAWLD++VAGRK  +                         T  AE     +  IF  G+ LF +G Y++A      A  + G  SR GGQYQLW  Q+LDAAGDK  A   L+ L+ H D DVRKV+
Sbjct:    6 SGIPNDLDELDDIAMNRGPKDQGKVAMWGAWLDESVAGRKVGK------------------------ATQQAE-----AEQIFRVGLELFERGRYKEAIKELTAACLLAGVNSREGGQYQLWLGQALDAAGDKKKAIACLETLKSHRDSDVRKVA 131          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A7S2V7T9 (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.650e-19
Identity = 72/223 (32.29%), Postives = 108/223 (48.43%), Query Frame = 0
Query:  228 DDIDQMDDILFDRAPNNVN--QVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVP--SLDDEPSPKASAILTTNFGPLRTAHVDKKPEPYSLEWYMEKERPP 446
            D++D +DD+  +R+PN+    +V+++GAWLD  +AGRK         + +   E                 E  E++   F   +   N G Y  +      AV   G  SR GGQ++LW AQ L A G  P A KLL+ L++H D DVR V+ E+ +I  AP ++L    F+E P  SL DE   K +  + T    ++ A   K+PE    E+ +    PP
Sbjct:   84 DELDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVASKTKELRSKMNKGEQL---------------EDAEKAEIFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVRTVAAEILYIYEAPRMKLRKEDFVEFPDTSLIDE---KYAETVWTKGPKIQVARKWKEPE--KEEYVIRSHGPP 286          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A7S0TAG8 (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAG8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.570e-19
Identity = 79/238 (33.19%), Postives = 116/238 (48.74%), Query Frame = 0
Query:  240 RAPNNVNQVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVPSLDD-------EPSPKASAILTTNFGPLRTAHVDKKPEPYSLEWYMEKERPPKVASDNSVLEAIFVTVAIFGTLAF 470
            R P N  QV++FGA LD ++AG +A    +   A +A  E   A V + ++  +   EAVER            N+  Y +A      A S     SR GGQ QLW AQ+L AA  +P   +LL  L  H D DVR VS+EL FI+ APAL L   S++ +  LD+       E +P             +T+ + ++PE  S+EW + + +  K +S+     AI  ++    +LAF
Sbjct:   58 RFPENEKQVRMFGAKLDASMAGVRAVSR-SAILAVLADEEEDSAGVSTEQKAEIFYAEAVER-----------MNRADYDRAVELLNRATSFARPTSRRGGQMQLWLAQALYAANRRPQCVRLLTVLAKHPDRDVRTVSKELMFIVKAPALVLNSSSYMTI-DLDNFNDDSVYERAPDGKISKRA-----QTSKLPEEPEYGSVEWALAQAQLEKPSSNFDPALAIAASLLCLASLAF 277          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A6V1UNI6 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK)

HSP 1 Score: 91.3 bits (225), Expect = 1.020e-16
Identity = 60/185 (32.43%), Postives = 96/185 (51.89%), Query Frame = 0
Query:  219 DVSMTANLPDDIDQMDDILFDRAPNNVNQVKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVPSL 403
            D+S   +L  ++D +DDI   R+    +QVK++GAWLD  +AGRKA  N     A +A  E             ++ EE   R    F   +   N+G Y ++ +   +AV   G+ S  GG ++LW AQ++ A G +  A + L+ L  H D ++R+V+ EL +I  AP ++L    F+E P +
Sbjct:   75 DLSKPMDLEKELDLIDDITMGRSEMERDQVKVYGAWLDADIAGRKAGDN-RKIKAKLASGER------------LAPEE---RGEIFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIRRVAAELLYIYEAPEIKLTKDDFVEFPDM 243          
BLAST of Ggra5838.t1 vs. uniprot
Match: D7FPX2 (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.880e-15
Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 0
Query:  200 RRRIAEAAINGDAPDMADDDVSMTA-NLPDDIDQMDDILFDRAPNNVNQ-VKLFGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVP 401
            RRR+  A ++   P   +  +  T  +L + +D +DD+  DR P    + VK+FGAWLD  VAGRKA +                A +++ +E T       E++   +   + L  +     + +   +AV + G  SR GG+++LW AQ+L        A ++L+ L+ H D DVRKVS EL +I  AP L L    F++ P
Sbjct:   38 RRRVVPAFMSD--PRQGEGGMEFTEPSLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLI--------ARMKNGEELTDQ-----EKAEIFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSHRDFDVRKVSAELLYIAQAPQLALNGEDFVDFP 226          
BLAST of Ggra5838.t1 vs. uniprot
Match: A0A846FN35 (Uncharacterized protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FN35_9CYAN)

HSP 1 Score: 75.9 bits (185), Expect = 1.880e-12
Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 0
Query:  293 MSAEEAVERSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSLDAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEVPSL 403
            MSA++ + R+   +A G   F  G YRQ+     +AV++V + ++LGG+ Q+W   + +AAG    A  L Q +  H D++ RK SR L +I+ AP L+  P    ++P L
Sbjct:    1 MSADQ-LARARVEYAAGRAAFEHGAYRQSVQHLEQAVALVSRATQLGGEIQIWLVTAYEAAGQTDAAIALCQAISQHPDLETRKQSRRLQYILEAPKLKTRPEWLTQIPDL 110          
The following BLAST results are available for this feature:
BLAST of Ggra5838.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3J3V92.480e-15576.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZV283.210e-3735.82Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NQQ75.160e-2846.75IU_nuc_hydro domain-containing protein n=1 Tax=Por... [more]
M2X0I29.860e-2836.48Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0BJX98.330e-2338.06Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2V7T91.650e-1932.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0TAG86.570e-1933.19Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
A0A6V1UNI61.020e-1632.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FPX22.880e-1531.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A846FN351.880e-1235.14Uncharacterized protein n=1 Tax=Cyanothece sp. SIO... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001910Inosine/uridine-preferring nucleoside hydrolase domainPFAMPF01156IU_nuc_hydrocoord: 73..169
e-value: 2.7E-12
score: 46.9
IPR036452Ribonucleoside hydrolase-likeGENE3D3.90.245.10coord: 50..203
e-value: 7.7E-16
score: 60.2
IPR036452Ribonucleoside hydrolase-likeSUPERFAMILY53590Nucleoside hydrolasecoord: 71..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..292
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 454..473
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 474..475
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:95186..97153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5838.t1Ggra5838.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 95186..97153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5838.t1 ID=Ggra5838.t1|Name=Ggra5838.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MMGPRYASVPPFVGSYYALMDQVDAGFDHTLMRMSYRNYILFGPGRILYS
DVMCGMAQFLPQRKRAYDIHKTPDQDDTSIPALLKHLDRTKPLEKITFLS
IGTLTPFALIFSEKHIRNAKSVLRRVDGLHIMGGAVNVKGNIFSSTTNNK
AEFNMFGDPDGAERAFQDMSNLDGDRGPSKDLSPVDKQYLEKVRARLARR
RRIAEAAINGDAPDMADDDVSMTANLPDDIDQMDDILFDRAPNNVNQVKL
FGAWLDDAVAGRKARRNLTPTDAAVAGSEHSDASVQSHKEPTMSAEEAVE
RSSSIFATGMTLFNKGLYRQANSFFAEAVSVVGQGSRLGGQYQLWYAQSL
DAAGDKPTAAKLLQKLRMHADVDVRKVSRELHFIMTAPALELEPGSFLEV
PSLDDEPSPKASAILTTNFGPLRTAHVDKKPEPYSLEWYMEKERPPKVAS
DNSVLEAIFVTVAIFGTLAFMYGSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001910Inosine/uridine_hydrolase_dom
IPR036452Ribo_hydro-like