Ggra5833.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5833.t1
Unique NameGgra5833.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length214
Homology
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A2V3IKN6 (tRNA dimethylallyltransferase 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKN6_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 3.460e-72
Identity = 117/213 (54.93%), Postives = 149/213 (69.95%), Query Frame = 0
Query:    1 MSLQGDAPQTRYSSDTLDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEH--EQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCDSNSEEALDTIVGMDEIEHEQFRKEHEAEQLERREDIIRQGKEMKRY 211
            M LQG APQT YS D LDYDFRCVF YD+RIP N RID RCE+M+LPR ++  +   EQ  EKS+LTE+  LL C GLR++  SP+FAIGYRQTI YL  RA+A Q +  +    +         S + +  FRSFL GFQ+ATRGYA+ Q KWFRKE LFHW+K  +++ + +  IV M E E++QFR++ EA+QLERR+ I+ QGK MKRY
Sbjct:  214 MPLQGGAPQTHYSGDALDYDFRCVFLYDDRIPLNRRIDERCEDMILPRRDLAQQDDWEQCFEKSMLTEVSELLRCRGLRVSSTSPAFAIGYRQTITYLVARAIAKQGKTVEDDTRADGQETVSSGSNDDVLAFRSFLEGFQSATRGYARAQAKWFRKEMLFHWVKAGASAGDVVANIVQMTESEYKQFREQSEADQLERRQSIVEQGKAMKRY 426          
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A7S1TCV9 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCV9_9RHOD)

HSP 1 Score: 93.2 bits (230), Expect = 1.540e-19
Identity = 59/168 (35.12%), Postives = 83/168 (49.40%), Query Frame = 0
Query:    1 MSLQGDAPQTRYSSDTLDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCDSNS 168
            + L G AP +R    +LDYDFRCVF    R     RIDARCE+M+L                ++ E+  LLL   L++   + + AIGYRQT  YL +  ++  +    + I   +             TF  FL GF AA+R YA +Q+KWFRK+  F WI    ++
Sbjct:   18 LPLSGGAPGSRDVDQSLDYDFRCVFLCLPRWILFRRIDARCEQMILA--------------GLVEEVAELLLAGRLKMDSSAAARAIGYRQTTEYL-KSLISLFRVKPLSLIQQQD-------------TFHHFLAGFMAASRQYASQQIKWFRKDPRFVWIPAGEHT 157          
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A2R6X662 (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X662_MARPO)

HSP 1 Score: 89.4 bits (220), Expect = 2.990e-17
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 0
Query:    1 MSLQGDAPQTRYSSDTLDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCDSNSEEALD 173
            M   G    +   S  LDYDF+C F Y +R+    RID RCEEM+     +  E   L++  IL                 SPS AIGYRQT+ YLT+    C+       +S                 F  +L GFQ A+R YAK QL WFR E +F  +   +   E +D
Sbjct:  220 MGALGPGQTSDSESIELDYDFQCYFMYTQRMDLYRRIDQRCEEMLTDTDGLLREASWLLDLGILPN-------------SSSPSRAIGYRQTMEYLTK----CRMSGGVTSVSQ----------------FLDYLQGFQRASRNYAKRQLTWFRGEDMFRHVDASAPRNEIVD 359          
BLAST of Ggra5833.t1 vs. uniprot
Match: M2Y694 (tRNA dimethylallyltransferase isoform 2 n=4 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y694_GALSU)

HSP 1 Score: 88.6 bits (218), Expect = 6.280e-17
Identity = 71/224 (31.70%), Postives = 99/224 (44.20%), Query Frame = 0
Query:    1 MSLQGDAPQTR-----YSSDTLDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCDSNSEEALDTIVGMDEIEH------EQFRKEHEAEQL--ERREDIIRQGKEMKRY 211
            + LQG AP  +          LDYDFRC F    R   N  ID RCE M+   G +    E L ++ +  +               S   AIGYRQTI YLT                             A+  F  +L  FQ A+R YA+ QL+WFR E+LFHW+  +  S + +  +  ++ I H      E++ KE   +++  E RE  ++QGKEMK Y
Sbjct:  240 LPLQGGAPNPKKLLQGIPVTDLDYDFRCFFLVAPRKELNRFIDRRCERMIAQDGLLKEVFELLYKRELSKD--------------SSAGKAIGYRQTIEYLTNH------------------------ETNALDQFMKYLRDFQNASRQYARRQLQWFRGEELFHWVPVEMFSND-ISHVAPIEYIMHWFAATSEEY-KESTRQRIDAEVREISLKQGKEMKTY 423          
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A7J7C1L9 (tRNA dimethylallyltransferase 9 isoform X2 n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C1L9_TRIWF)

HSP 1 Score: 80.1 bits (196), Expect = 6.530e-14
Identity = 52/161 (32.30%), Postives = 73/161 (45.34%), Query Frame = 0
Query:   17 LDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCDSNSEEALDTIVG 177
            LDY+F C F    R+     ID RCE+M+     I  E + L++  +L                 S + AIGYRQT+ YLT   L              +G  S      +   F SFL  FQ A+R +AK Q+ WFR E+++HW+      EE ++ I G
Sbjct:  267 LDYEFICFFLSSPRLDLYKLIDFRCEDMLSGDDGILSEAKWLLDIGLLPN-------------SNSATRAIGYRQTMEYLTNCRL--------------QGGRS------SAGEFFSFLSEFQQASRNFAKRQMTWFRNEQIYHWLDASKPLEEVVNFICG 394          
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A4D9D1X7 (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.270e-12
Identity = 72/217 (33.18%), Postives = 95/217 (43.78%), Query Frame = 0
Query:    2 SLQGDAPQTRYSSDTLD--YDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESP-SFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCD-SNSEEALDTI---VGMDEIEHEQFRKEHEAEQLERREDIIRQGKEMKRY 211
            S    +  T   S TL   YDFRC F    R      ID RC +MV              E  +L E   LL    L   P SP   AIGYRQTI YL                 S EG   +     A++    FL  F  ATR YAK+Q+ WFR +  F W++ +  +    LD +   V  DE+ H   R+E E ++  R E+I+ +GK M++Y
Sbjct: 2665 SAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREDLCRLIDRRCLQMV--------------EGGLLEETAHLLAAGTLN--PSSPPGRAIGYRQTIEYL-----------------SKEGIEGEMAEATALQ---EFLEDFATATRRYAKQQMVWFRAQAEFIWLRWNLQDLGPVLDAVRASVAEDEVSH-LARQEGEGQKALREENIM-EGKRMRKY 2843          
BLAST of Ggra5833.t1 vs. uniprot
Match: tRNA dimethylallyltransferase 9 isoform X2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7F685 (tRNA dimethylallyltransferase 9 isoform X2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7F685)

HSP 1 Score: 74.7 bits (182), Expect = 3.650e-12
Identity = 48/146 (32.88%), Postives = 67/146 (45.89%), Query Frame = 0
Query:   17 LDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWI 162
            LDY+F C F    R+     ID RCE+M+     I  E + L++  +L                 S + AIGYRQT+ YLT   L              +G  S      +   F SFL  FQ A+R +AK Q+ WFR E+++HW+
Sbjct:  267 LDYEFICFFLSSPRLDLYKLIDFRCEDMLSGSDGILSEAKWLLDIGLLPN-------------SNSATRAIGYRQTMEYLTNCRL--------------QGGRS------SAGEFFSFLSEFQQASRNFAKRQMTWFRNEQIYHWL 379          
BLAST of Ggra5833.t1 vs. uniprot
Match: W7T6K3 (Trna dimethylallyltransferase 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6K3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.520e-11
Identity = 71/217 (32.72%), Postives = 95/217 (43.78%), Query Frame = 0
Query:    2 SLQGDAPQTRYSSDTLD--YDFRCVFSYDERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESP-SFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCD-SNSEEALDTI---VGMDEIEHEQFRKEHEAEQLERREDIIRQGKEMKRY 211
            S    +  T   S TL   YDFRC F    R      ID RC +MV              E  +L E   LL    L   P SP   AIGYRQTI YL                 S EG   +     A++    FL  F  ATR YAK+Q+ WFR +  F W++ +  +    LD +   V  DE+ H   R+E + ++  R E+I+ +GK M++Y
Sbjct:  268 SAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMV--------------EGGLLEETAHLLAAGTLN--PSSPPGRAIGYRQTIEYL-----------------SKEGIEGEMAEATALQ---EFLEDFATATRRYAKQQMVWFRAQAEFMWLRWNLQDLGPVLDAVRASVAEDEVSH-LARQEGKGQKALRVENIM-EGKRMRKY 446          
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A448ZKF8 (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKF8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.940e-9
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query:   16 TLDYDFRCVFSY-DERIPWNPRIDARCEEMVLPRGNITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWI 162
            +L +D RC F   D+R+     +D RCE+M++              K +L E   L L   L   PE    AIGYRQT+ YL+       KQ  + +    EG+ S   + E    F  +L  F  ATR YAK+Q+ WFRK+K F +I
Sbjct:  264 SLGFDVRCFFLCPDDRMSHTRVVDKRCEQMLM--------------KGLLEETTELSLSGCL---PEMAERAIGYRQTLDYLSRD----HKQEGEEE----EGSKSKLTTAEK-EGFEFYLNEFTTATRRYAKKQMSWFRKDKEFMFI 385          
BLAST of Ggra5833.t1 vs. uniprot
Match: A0A7S2C7W9 (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7W9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.910e-6
Identity = 40/130 (30.77%), Postives = 63/130 (48.46%), Query Frame = 0
Query:   86 AIGYRQTIAYLTERALACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQLKWFRKEKLFHWIKCDSNSEEAL---DTIVGMDEIEHEQFRKEHEAE-QLERREDIIRQGKEMKRY 211
            AIGYRQ I YLT                    A+      EA   F +FL+ F  ATR YA +Q+KWFRK+  F ++    +  + +   + + G+  +  E++     A  Q E R+ +++QGK+M+ Y
Sbjct:   18 AIGYRQAIDYLTR-------------------ADFGAADAEA---FSNFLLKFGTATRNYATQQIKWFRKDPSFLFVSVHPDGRDRVTSQEEVAGLLALSREEYEARLAAPAQSEVRDSLMKQGKQMRTY 125          
The following BLAST results are available for this feature:
BLAST of Ggra5833.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IKN63.460e-7254.93tRNA dimethylallyltransferase 9 n=1 Tax=Gracilario... [more]
A0A7S1TCV91.540e-1935.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2R6X6622.990e-1733.53Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
M2Y6946.280e-1731.70tRNA dimethylallyltransferase isoform 2 n=4 Tax=Ga... [more]
A0A7J7C1L96.530e-1432.30tRNA dimethylallyltransferase 9 isoform X2 n=3 Tax... [more]
A0A4D9D1X73.270e-1233.18E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
tRNA dimethylallyltransferase 9 isoform X2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7F6853.650e-1232.88tRNA dimethylallyltransferase 9 isoform X2 n=1 Tax... [more]
W7T6K31.520e-1132.72Trna dimethylallyltransferase 9 n=1 Tax=Nannochlor... [more]
A0A448ZKF81.940e-935.14Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2C7W92.910e-630.77Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
NoneNo IPR availablePFAMPF01715IPPTcoord: 14..156
e-value: 8.9E-11
score: 42.0
NoneNo IPR availablePANTHERPTHR11088:SF60TRNA DIMETHYLALLYLTRANSFERASE 9coord: 13..178
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 8..182
e-value: 9.4E-15
score: 56.5
IPR039657DimethylallyltransferasePANTHERPTHR11088TRNA DIMETHYLALLYLTRANSFERASEcoord: 13..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:36235..36876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5833.t1Ggra5833.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 36235..36876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5833.t1 ID=Ggra5833.t1|Name=Ggra5833.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=214bp
MSLQGDAPQTRYSSDTLDYDFRCVFSYDERIPWNPRIDARCEEMVLPRGN
ITGEHEQLMEKSILTEICRLLLCSGLRIAPESPSFAIGYRQTIAYLTERA
LACQKQNTQAQISSPEGANSDERSEEAIRTFRSFLVGFQAATRGYAKEQL
KWFRKEKLFHWIKCDSNSEEALDTIVGMDEIEHEQFRKEHEAEQLERRED
IIRQGKEMKRYYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR039657Dimethylallyltransferase