Ggra5830.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5830.t1
Unique Name	Ggra5830.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	596

Homology

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BLAST of Ggra5830.t1 vs. uniprot
Match: A0A2V3IV31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV31_9FLOR)

HSP 1 Score: 625 bits (1613), Expect = 2.040e-217
Identity = 366/601 (60.90%), Postives = 421/601 (70.05%), Query Frame = 0

Query:    1 MLRGFLNRPAS-RHHRPHARRXXXXXXXXXXXXXXATRTTRAPPARSLSPPRRPTRSRSRSVSSDSPPDSLSGASSYSHIGFRSPRTPPFMRRSLSFTGLHEEPFPFSRGLDFRP--HGRARSRSRSPRSRMRSSSVDRFPFD-PYEQRFPFERRRAFDDFPLRFDERPPVEDAMFEQXXXXXXXXPPFPPHHRRRAQFFDDRDMPHFPDQPPRFS-IDRAMRFPARTPNIVFMQPRSFVFNVGSLADSRAPWLQVMDEFDGRRVLYATGNYMQRSSPVRLHDDYSGELLRLSPRKSSSKSRRYASLRVVTFNKYRDPVMTAVSRRDAYGPTNPQGAGPPPFSYA--PN---ANPYYAPQGAYPYPGQYSVPPYGAPGAGYPDMQAGAANPIPP-ETSAPQPTVDPAGDPYAAXXXXXQQQPHGVPVYPQPDQSRQPGQEYPGPQPQYQQWQGMYYQPSTDYPNQTFPQGNKPGMYANYMYGFGYQSGVGGQP-FQAWGASNQTTTVAEFFSGEKSMDDIRKSRRDGGRRRHPIFRLIRGGSGEKEWIQTSTSRELASITYSTPGSDGFAVEGNSYRVVVQPGVDLTMITSAIVSRIIMWA 589
            M+RG  NR +  RH RP  RR              ATRT RAP  RS+SPPRRPTRS S S+  DSPPDSLSG SSYSHIGFR    PPFMRRS SF+   ++PF FS+  +FR     RARSRS SPR R RSSS+ R PF+ P+  RFP++    FDDFPL FDE  P++    +         PPF P HRRR  FFDD   P FPD       ID AMRFPARTPNIVFM+PRSF+ NVGS ADSR PWLQ+MDE++GRRVLYATGN MQR+S VRL+DD+SGELLRL PRKSSSKSRRYASLRV+TFNKYRDPVMT+VS R A GP  PQG  PPPF++   PN   ANPYY PQ AYPY G Y +    APG  YP MQ G  NP PP E    Q T +  G  Y       QQQP GVP YPQPDQ+R+P QEYPGPQ QYQQWQGMYYQP  +Y NQ   QG KP M A+ MY FGY  G GG+P  Q W + N  T VAEFF GE+SMD+IR SRRDG RR++P+FRL+R   G KE+IQ+S+ RELA+ITY++ GSD FAVEGNSYRV++ PGVDLTMI++A+VSRII+WA
Sbjct:    1 MMRGLFNRSSHVRHARPPTRRRSRSRSPH------ATRTRRAPLTRSVSPPRRPTRSLSPSI--DSPPDSLSGGSSYSHIGFRPSHAPPFMRRSFSFSAFPDDPFHFSQPSEFRQPLRRRARSRSCSPRGRFRSSSLGRTPFEQPFNPRFPYQHPLEFDDFPLPFDEHHPLDGPPIDAFE------PPFMPPHRRRPPFFDDHG-PDFPDXXXXXXXIDHAMRFPARTPNIVFMEPRSFLCNVGSPADSRVPWLQIMDEYEGRRVLYATGNCMQRNSQVRLNDDFSGELLRLVPRKSSSKSRRYASLRVITFNKYRDPVMTSVSMRRADGPITPQGPPPPPFAFHAYPNTGSANPYYPPQPAYPYAGPYGMX-XXAPGPAYPGMQQGNVNPPPPPENPMQQSTANTNGTEYPGPFNNSQQQPEGVPFYPQPDQTREPAQEYPGPQQQYQQWQGMYYQPPPNYSNQDCAQGFKPNMNADQMYNFGYP-GYGGRPQHQGWDSMNHVT-VAEFFGGERSMDEIRHSRRDG-RRKNPLFRLVRSADGSKEFIQSSSGRELANITYASIGSDAFAVEGNSYRVMLHPGVDLTMISAALVSRIIIWA 582

The following BLAST results are available for this feature:

BLAST of Ggra5830.t1 vs. uniprot

BLAST of Ggra5830.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IV31	2.040e-217	60.90	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..438

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000935_pilon	contig	tig00000935_pilon:415981..417768 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5830.t1	Ggra5830.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000935_pilon 415981..417768 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5830.t1 ID=Ggra5830.t1|Name=Ggra5830.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=596bp
MLRGFLNRPASRHHRPHARRRRSRSRSRSRSRTRATRTTRAPPARSLSPP
RRPTRSRSRSVSSDSPPDSLSGASSYSHIGFRSPRTPPFMRRSLSFTGLH
EEPFPFSRGLDFRPHGRARSRSRSPRSRMRSSSVDRFPFDPYEQRFPFER
RRAFDDFPLRFDERPPVEDAMFEQFEQFEQFEPPFPPHHRRRAQFFDDRD
MPHFPDQPPRFSIDRAMRFPARTPNIVFMQPRSFVFNVGSLADSRAPWLQ
VMDEFDGRRVLYATGNYMQRSSPVRLHDDYSGELLRLSPRKSSSKSRRYA
SLRVVTFNKYRDPVMTAVSRRDAYGPTNPQGAGPPPFSYAPNANPYYAPQ
GAYPYPGQYSVPPYGAPGAGYPDMQAGAANPIPPETSAPQPTVDPAGDPY
AAPWSDPQQQPHGVPVYPQPDQSRQPGQEYPGPQPQYQQWQGMYYQPSTD
YPNQTFPQGNKPGMYANYMYGFGYQSGVGGQPFQAWGASNQTTTVAEFFS
GEKSMDDIRKSRRDGGRRRHPIFRLIRGGSGEKEWIQTSTSRELASITYS
TPGSDGFAVEGNSYRVVVQPGVDLTMITSAIVSRIIMWAGNDERF*