Ggra5816.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5816.t1
Unique NameGgra5816.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Homology
BLAST of Ggra5816.t1 vs. uniprot
Match: A0A2V3IT01 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT01_9FLOR)

HSP 1 Score: 177 bits (449), Expect = 1.570e-52
Identity = 94/155 (60.65%), Postives = 120/155 (77.42%), Query Frame = 0
Query:   37 RALCTQAAD-SGEQSALHGTATRDAIHSAFAKRAADALRYEYFAQRAELEAEVEAAHMFRSLLESSKQQAMGLMELMEEYDDAQFGTTLNNLEIMADDERTLADVQFFEAADAADKEQLTHIKEWFEDLSDAATRAANRLEFTAGIVDAEALDGD 190
            R L T+A D S E++ L  TAT  AI  AF +RAADA+RYEYFAQRAELEAEVE A +FRSL+E+SKQQAMG MEL+EEY++A+FG+TL NLEIM D ER + +    +  D A++E+  H+KEWFED+ DA  RAA+RLE+TA ++DAE L+GD
Sbjct:   46 RNLSTEAEDKSSEEAPLSNTATLVAIQKAFTQRAADAIRYEYFAQRAELEAEVETAQLFRSLIETSKQQAMGFMELLEEYNEAEFGSTLTNLEIMTDIERRMGEEDLVKGGDVAEEEEFEHVKEWFEDVGDACCRAADRLEYTASVLDAEELEGD 200          
BLAST of Ggra5816.t1 vs. uniprot
Match: L1JX37 (Ferritin-like diiron domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JX37_GUITC)

HSP 1 Score: 66.6 bits (161), Expect = 3.240e-10
Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0
Query:   37 RALCTQAADSGEQSALHGTATRDAIHSAFAKRAADALRYEYFAQRAELEAEVEAAHMFRSLLESSKQQAMGLMELMEEYDDA----QFGTTLNNLEIMADDERTLADVQFFEAADAADKEQLTHIKEWFEDLSDA 167
            RA+C+++        L GT T   +  AFA       RYEYFAQRA++E   E A  FR + +S + QA+G +E ++E  D      FG+T++NL      E    +  + E A  A +E    +  WFE L++A
Sbjct:   23 RAMCSKS--------LEGTKTLQNLKDAFAGECMAKARYEYFAQRADVEGYTEIAAAFRQVAQSEEGQALGHLEFLQEIGDPVSNQPFGSTIDNLNAAIIGENHDGNTMYPEFAKVARQEGFEDVANWFETLAEA 149          
BLAST of Ggra5816.t1 vs. uniprot
Match: A0A7S0BRR0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BRR0_9RHOD)

HSP 1 Score: 64.3 bits (155), Expect = 4.540e-9
Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 0
Query:   52 LHGTATRDAIHSAFAKRAADALRYEYFAQRAELEAEVEAAHMFRSLLESSKQQAMGLMELMEEYDD--AQFGTTLNNLEIMADDERTLADVQFFEAADAADKEQLTHIKEWFEDLSDAA---TRAANRLEFTAGIVDAEALDGDTM 192
            L GT T + +  AFAK+A    RYEY+AQ+A++E    AA + R +  S+K+QA G ME ++E D+   +  +T  N+E     ER   + ++   A+ A +E L+ +  W E L + +    R   +L+     +  EA + D M
Sbjct:   50 LAGTKTYENLREAFAKKAMAMARYEYYAQKADVEGLTHAAQVLRGISNSAKEQAFGHMEFLDEGDEEETEASSTDMNIESCLAHERKEFEEKYPTWAEVAYEENLSDVGTWMETLRNTSFNNMRTLQKLQDAVEELYKEAEEEDAM 195          
BLAST of Ggra5816.t1 vs. uniprot
Match: A0A535D4M7 (Rubrerythrin n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535D4M7_9CHLR)

HSP 1 Score: 62.4 bits (150), Expect = 6.710e-9
Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 0
Query:   52 LHGTATRDAIHSAFAKRAADALRYEYFAQRAELEAEVEAAHMFRSLLESSKQQAMGLMELMEEYDD--AQFGTTLNNLEIMADDERTLADVQFFEAADAADKEQLTHIKEWFEDLSDAATRAANRL 175
            L G+ T   +  AFA+ A  ALRY YFA+RA++E   + A + R+L +       G +E +EE  D  A  G   +NL+    +    AD  + E A AA KE+L  + +WFE ++ A    A RL
Sbjct:    4 LEGSGTATNLREAFAREAQAALRYLYFARRADIEGRADVAALLRTLADGETGHGFGHLEFLEEAGDGLAGGGDAASNLDSAIAEADGDADA-YDEYAAAARKERLADVADWFEAVAGAERAHAGRL 128          
The following BLAST results are available for this feature:
BLAST of Ggra5816.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IT011.570e-5260.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
L1JX373.240e-1034.07Ferritin-like diiron domain-containing protein n=1... [more]
A0A7S0BRR04.540e-932.19Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A535D4M76.710e-935.71Rubrerythrin n=1 Tax=Chloroflexi bacterium TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012347Ferritin-likeGENE3D1.20.1260.10coord: 46..181
e-value: 2.1E-13
score: 52.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..205
IPR009040Ferritin-like diiron domainPROSITEPS50905FERRITIN_LIKEcoord: 51..186
score: 9.699831
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 53..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:383091..383753 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5816.t1Ggra5816.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 383091..383753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5816.t1 ID=Ggra5816.t1|Name=Ggra5816.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MYATKLRSAIWRVAPAWRCGAAWRSRACGGAAAARGRALCTQAADSGEQS
ALHGTATRDAIHSAFAKRAADALRYEYFAQRAELEAEVEAAHMFRSLLES
SKQQAMGLMELMEEYDDAQFGTTLNNLEIMADDERTLADVQFFEAADAAD
KEQLTHIKEWFEDLSDAATRAANRLEFTAGIVDAEALDGDTMEDDDDDEE
EELEQQKEDQSPKEPRATSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012347Ferritin-like
IPR009040Ferritin-like_diiron
IPR009078Ferritin-like_SF