Ggra5809.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5809.t1
Unique NameGgra5809.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length370
Homology
BLAST of Ggra5809.t1 vs. uniprot
Match: A0A2V3IZ99 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ99_9FLOR)

HSP 1 Score: 333 bits (855), Expect = 1.960e-109
Identity = 181/376 (48.14%), Postives = 251/376 (66.76%), Query Frame = 0
Query:    1 MLLMLQQWDSEELEIAMLLDEPPIYEYEPIPSGGEPWRAEGHLAKASRDIDLNGFAWLFVVYKSDPLKTWGQRKVKLTTGGEILREETHCGLWTGLYRSLRYEIIVRKVYGNIVGKDSDVRCAVIIDARIQHDPPDSEAIS-RPPTRDYENSQQDSSFDPCQNGDSHKTDS-------CRNETA-DGGTYTASPSSGRNQGRSRGGKTILPCRSDPELHSASEFKSDS-PSQRAASHEAVVHANNVQGVPGGNLGYDEPSLHEALGHTEPQYRSRSDLYGEIQLVPKQKHGAVVSFLINGGHCRDDWYVEDGYSYSERFQFLITEFQRRPFVSEVLSRLGFVVGAAPNIKETLQPHLVKVMHSFEDMSKVTKHGRF 366
            ML+ML+ W+S+ELE+AMLLDE P Y++EP  S GEPWRA G+LAKASRDIDL G+AWLFVV+ SDPL++WGQ++VK+T+GGEILR+  H GLWTG Y SLRYEII R+VY NIVG+DS     V++DAR+Q DPPDSE++S +   R  +N   +   +P +N    + +         R++TA D     + PS        RG ++  P   D E  +     +D+ P  +AAS   V     +  +  G+   ++   H+ LGH EPQ+RSR DLYGE+ L PK++HGAV+S+ ++     + W+V+D ++Y  RFQFL+TEFQRRPFV+++LSRLGF+ G    I E L PHL+KV+H+FE M K+ K+GR+
Sbjct:    1 MLVMLEMWNSKELELAMLLDEAPYYQHEPTQSVGEPWRATGYLAKASRDIDLAGYAWLFVVFNSDPLRSWGQKRVKVTSGGEILRKRAHAGLWTGEYESLRYEIIARQVYRNIVGRDSIEDYQVVVDARVQIDPPDSESLSVQQKQRSEDNRNPEQGVNPRENSSLVEKEQNEPFVQLARSKTASDKSCGHSRPSEPECAISHRGDQS--PVSPDSESRTRQFQGTDTKPCPKAASPNEVGSPYRIGAMGPGS---EQLGPHQVLGHPEPQFRSRRDLYGEVNLTPKRRHGAVISY-VDQERYTESWFVDDHFTYMNRFQFLLTEFQRRPFVAQILSRLGFLDGYVLRIDEALHPHLLKVIHAFEGMEKIAKNGRY 370          
BLAST of Ggra5809.t1 vs. uniprot
Match: A0A2V3IVR0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVR0_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 4.120e-47
Identity = 121/375 (32.27%), Postives = 172/375 (45.87%), Query Frame = 0
Query:    1 MLLMLQQW-DSEELEIAMLLDEPPIYEYEPIPSGGEPWRAEGHLAKASRDIDLNGFAWLFVVYKSDPLKTWGQRKVKLTTGGEILREET-HCGLWTGLYRSLRYEIIVRKVYGNIVGKDSDVRCAVIIDARIQHDPPDSEAISRPPTRDYENSQQDSSFDPCQNGDSHKTDSCRNETADGGTYTASPSSGRNQGRSRGGKTILPCRSDPELHSASEFKSDSPSQRAASHEAVVHANNVQGVPGGNLGYDEPSLHEALGHTEPQYRSRSDLYGEIQLVPKQKHGAVVSFLINGGHCRDDWYVEDGYS------------YSERFQFLITEFQRRPFVSEVLSRLGFVVGAAPNIKETLQPHLVKVMHSFEDMSKVT 361
            MLLMLQ++  +E+LE+AMLLDE P Y ++PI  GGEPWRA G L +A R  DL+G+AWLFVVYKSDP   WG+ +VK+ +GG ILR +    G+ TG +  LRYE++ R V+ N +G DS     +I  A I+ DP  ++                                                                               D P+  A + + V    N +    G    +    H  LG  EPQ  S+   Y E  LVPK  +G  +S  +  G+  D  Y  DG              Y   +QFL+TE+QRRP+V+ +++RLGF  G  P I+    P+L +V+ +F+ ++ VT
Sbjct:    1 MLLMLQKFGQTEDLELAMLLDERPFYNFQPILCGGEPWRANGCLVEAMRCADLHGWAWLFVVYKSDPASQWGRHRVKVVSGGIILRAKLGDGGIETGQFERLRYEVLARGVFHNAIGIDSISDHPLISLAAIRRDPRSAK-------------------------------------------------------------------------------DEPT--AITQDKVASRRNQEQ---GGKEQERVYTHRVLGLPEPQIPSKPGRYDEPCLVPKLLYGVEISRTLPKGNA-DKIYFGDGSGRDKLPPEKLVERYETTYQFLLTEYQRRPYVAHIMTRLGFTEGNIPGIETACMPYLRQVIQAFDGLANVT 290          
BLAST of Ggra5809.t1 vs. uniprot
Match: R7QF02 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF02_CHOCR)

HSP 1 Score: 128 bits (321), Expect = 2.390e-30
Identity = 108/378 (28.57%), Postives = 173/378 (45.77%), Query Frame = 0
Query:    1 MLLMLQQWDSEELEIAMLLDEPPIYEYEPIPSGGEPWRAEGHLAKASRDIDLNGFAWLFVVYKSDPLKTWGQRKVKLTTGGEILREETHC-GLWTGLYRSLRYEIIVRKVYGNIVGKDSDVRCAVIIDARIQHDPPDSEAISRPPTRDYENSQQDSSFDPCQNGDSHKTDSCRNETADGGTYTASPSSGRNQGRSRGGKTILPCRSDPELHSASEFKSDSPSQRAASHEAVVHANNVQGVPGGNLGYDEPSLHEALGHTEPQYRSRSDLYGEIQ-----LVPKQKHGAVVSFLINGGHCRDDWYVEDGYSYSERFQFLITEFQRRPFVSEVLSRLGFVVGA------APNIKETLQPHLVKVMHSFEDMSKVTKHGRF 366
            MLLMLQ+W  + LE+AMLLDE P +    + SG EPWRA+  L  A+R +DL G AWL+VV++ DP  TWG + VKL  GG I R++    G+ TG+Y+ LRYE++ R V+ NI+G+DS     VI +  +       + I                         H+  S R   A       SP   R          +   R + ++ S+ E   ++ ++R A+ E  +                +P L +A+   +    +      +       LV ++K  A +   +      D+  V++   + +R  F + E+QRRPFV  ++ RLGF+  +      AP++      HL  ++ S + ++K T  G F
Sbjct:    1 MLLMLQKWPGQTLELAMLLDETPQFHARAMHSG-EPWRADSVLCAAARSVDLEGCAWLYVVFEKDPPYTWGSKMVKLLGGGRIARKDVSDEGVPTGMYKELRYEVLARHVFHNIIGRDSQSGYQVIRNCSLGAPEEVDKVI-------------------------HRKHSSRGRRAMEDERERSPMYLRE---------LRERRENQKMMSSGERWDENKARRIAASEYPL----------------DPLLGKAIAQVKTTGAALPPFLPDGNKTWCCLVWERKE-AGLEVTMEKEKITDERDVDNLELFRKR-GFHMIEYQRRPFVQIIMGRLGFIRRSRNNERRAPSLVNVCSGHLRNIVMSMDSIAKATSCGAF 325          
The following BLAST results are available for this feature:
BLAST of Ggra5809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IZ991.960e-10948.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVR04.120e-4732.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF022.390e-3028.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:368276..369935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5809.t1Ggra5809.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 368276..369935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5809.t1 ID=Ggra5809.t1|Name=Ggra5809.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=370bp
MLLMLQQWDSEELEIAMLLDEPPIYEYEPIPSGGEPWRAEGHLAKASRDI
DLNGFAWLFVVYKSDPLKTWGQRKVKLTTGGEILREETHCGLWTGLYRSL
RYEIIVRKVYGNIVGKDSDVRCAVIIDARIQHDPPDSEAISRPPTRDYEN
SQQDSSFDPCQNGDSHKTDSCRNETADGGTYTASPSSGRNQGRSRGGKTI
LPCRSDPELHSASEFKSDSPSQRAASHEAVVHANNVQGVPGGNLGYDEPS
LHEALGHTEPQYRSRSDLYGEIQLVPKQKHGAVVSFLINGGHCRDDWYVE
DGYSYSERFQFLITEFQRRPFVSEVLSRLGFVVGAAPNIKETLQPHLVKV
MHSFEDMSKVTKHGRFRAA*
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