Ggra5800.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5800.t1
Unique NameGgra5800.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length279
Homology
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BLAST of Ggra5800.t1 vs. uniprot
Match: A0A2V3IZ89 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ89_9FLOR)

HSP 1 Score: 217 bits (552), Expect = 1.080e-66
Identity = 98/196 (50.00%), Postives = 134/196 (68.37%), Query Frame = 0 
Query:   30 HAVKFTPQDISHISYYGDRALYRPQLCPASVTFTARARPMSELADDKVAIHASDILMDDEPCTGSAPTLLFSPIGTTDHLPPQWLFEDSALTKQPVNFTCGSKRYAILYGYLNDVKTPSGFLDDSVVYLDFAVIPNTHPFSFCSYAARRTDGDRPVNYEPFPTVETWNKVREARNLPPLPE-DQSTDDEELMMGSD 224
            H V+F+  DIS IS+YG  A+YRP  CP S++F AR R ++EL+ + + ++ S+I  D +PC+     + FSPIG  +HLPPQW+FED+     PVN TCG+  + + YGYLNDVKTP+G+LD +  YLDFAV P T PF+FCSY A RTD  R V+  PFPT+++WN  R A+NLPP+ + DQ   D+E +   D
Sbjct:   25 HPVQFSASDISQISFYGASAVYRPDSCPNSISFNARVRQLAELSPEALGMYTSEIAADGQPCSSPTSVISFSPIGRPEHLPPQWVFEDAVQKGMPVNLTCGTWAFTVRYGYLNDVKTPNGYLDANKAYLDFAVYPYTTPFAFCSYVAERTDQSRAVDLAPFPTLDSWNSARAAKNLPPVTKGDQGEADDEAVASPD 220
The following BLAST results are available for this feature:
BLAST of Ggra5800.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ891.080e-6650.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..223
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..278
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:341284..342216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5800.t1Ggra5800.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 341284..342216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5800.t1 ID=Ggra5800.t1|Name=Ggra5800.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=279bp
MFPTSPLSSTMLLSVLLLVAVVAAHDGQIHAVKFTPQDISHISYYGDRAL
YRPQLCPASVTFTARARPMSELADDKVAIHASDILMDDEPCTGSAPTLLF
SPIGTTDHLPPQWLFEDSALTKQPVNFTCGSKRYAILYGYLNDVKTPSGF
LDDSVVYLDFAVIPNTHPFSFCSYAARRTDGDRPVNYEPFPTVETWNKVR
EARNLPPLPEDQSTDDEELMMGSDEPMESPEHMASVVVQPVQPLPFPSPE
AMVRTSLGVRVVEAVSNVIGPTLSSIHL*
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