Ggra5798.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5798.t1
Unique NameGgra5798.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length264
Homology
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A2V3IUX4 (Cobalt-zinc-cadmium resistance protein CzcN n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX4_9FLOR)

HSP 1 Score: 351 bits (900), Expect = 1.550e-119
Identity = 183/263 (69.58%), Postives = 212/263 (80.61%), Query Frame = 0
Query:    1 MFKAAFVSSFCAGLRPTQRLALHERDGAPLHRRSTSRRRVRMNADPDNSPAD-AQKTTSTASAPSFDTDIFSKFVDSAQQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPSM 262
            M   AFVSSF   L PT        +  PL      R  +RMN DPD   ++ A +TTS   APSFDTD+FSKFVDSAQQKID FQQSVQE+D +++VD+TKQASLGLVDNF+AGDWLNRGELYGAIQL FV+F+LRGGG LD LVNFLAGPALF VGA+IS K+VFDLG KQLSIWP+PVP GEL+T G YEYVRHPMY+GV+LAS GFAVAT SP+RLAL+IAF AFL KKIDVEEQFLKD+YPGYEEY +EV +K++P++
Sbjct:    1 MVSPAFVSSFLPRLSPTTVPTAFRHNAKPLRLCRAPRAPLRMNTDPDKPESNPANQTTSAFEAPSFDTDVFSKFVDSAQQKIDSFQQSVQEIDATEIVDNTKQASLGLVDNFIAGDWLNRGELYGAIQLAFVVFLLRGGGALDFLVNFLAGPALFFVGALISGKAVFDLGLKQLSIWPAPVPNGELQTSGAYEYVRHPMYSGVVLASVGFAVATGSPARLALSIAFAAFLSKKIDVEEQFLKDAYPGYEEYSEEVPYKMIPTI 263          
BLAST of Ggra5798.t1 vs. uniprot
Match: R7QUE4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUE4_CHOCR)

HSP 1 Score: 266 bits (680), Expect = 9.660e-86
Identity = 133/219 (60.73%), Postives = 172/219 (78.54%), Query Frame = 0
Query:   45 DPDNSPADAQKTTSTASAPSFDTDIFSKFVDSAQQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPSMF 263
            D  ++ +  ++  +T  APSFDTD+FS FVDSAQ +I+D Q+   EVD+ +LV++ K+ S GL+DN LAGDWLNRGELYG IQLVFVI +LR  G LD LV+FL GP +   GA IS KS++DLG KQLSIWP+PVP G+LKT+GLYEYVRHPMY+G++LASAG++V+T SP+RLALTIAF AFL KKI VEE++L ++YP Y  Y  +VT K+LP ++
Sbjct:   73 DSSSASSPEERPNTTFEAPSFDTDVFSNFVDSAQSRIEDLQKQFSEVDSDELVENAKETSTGLIDNVLAGDWLNRGELYGGIQLVFVILLLRSPGGLDGLVSFLCGPLILFAGAFISGKSLWDLGRKQLSIWPAPVPNGDLKTNGLYEYVRHPMYSGLILASAGWSVSTGSPARLALTIAFAAFLAKKISVEEEYLLETYPEYSTYCDKVTNKILPGIY 291          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A1X6NWT9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWT9_PORUM)

HSP 1 Score: 200 bits (508), Expect = 1.440e-59
Identity = 103/224 (45.98%), Postives = 152/224 (67.86%), Query Frame = 0
Query:   41 RMNADPDNSPADAQKTTSTASAPSFDTDIFSKFVDSAQQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPG-YEEYMQEVTFKLLPSMF 263
            +++A  + + A++    +    PS +T IFS FVD    K+   +Q V +VD  ++  ++  +   L DNFLAGDWLNRGEL+GA+QL FV  +++    LD +V+F+ GP + I GA++S K  +DLG KQ+S+WP+PVP G LKT G+Y  +RHP+Y+G+LL+S G+A AT+S  R ALT A    L KKIDVEE+FL +SY   YE+YM++V +K++P +F
Sbjct:   85 KVDATAEAAAAESDAPVTEFQPPSLNTTIFSDFVDDFDSKLQSVKQKVADVDVQQIQGESSASLKALADNFLAGDWLNRGELWGAVQLAFVYMMVKESN-LDNVVSFIVGPVVLISGAILSVKGAWDLGRKQISLWPAPVPDGTLKTKGIYGVIRHPLYSGLLLSSLGYASATSSAERFALTFALAYVLRKKIDVEEKFLVESYGDEYEDYMEDVPYKIIPKVF 307          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A7S1XJW4 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XJW4_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 1.220e-53
Identity = 89/192 (46.35%), Postives = 129/192 (67.19%), Query Frame = 0
Query:   72 KFVDSAQQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPSMF 263
            ++V+ A+ K +D ++ + ++D  +L ++  +A   L +NFL G+WL RGE+YG  QLV  + +L G   LD LV+F  GP   + G  +S K++ DLG K LSIWPSPVP+  L T GLYE VRHP+Y+G LLAS GFA AT SP+R ALT+      +KKI++EE+FL++ +P Y  Y  +V +K+LP +F
Sbjct:   50 EWVEKARNKAEDLEKYLSDIDGEELAENATEAGKLLANNFLGGEWLQRGEVYGGAQLVLALLVLNGQPLLDGLVSFALGPVTMVAGVALSIKALSDLGFKNLSIWPSPVPSNSLVTTGLYEKVRHPVYSGALLASLGFASATGSPARFALTLGLAYLFIKKIEIEEEFLEEKHPDYALYKVDVPYKILPKVF 241          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A7S1TEK5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEK5_9RHOD)

HSP 1 Score: 180 bits (457), Expect = 2.140e-52
Identity = 97/228 (42.54%), Postives = 140/228 (61.40%), Query Frame = 0
Query:   40 VRMNADPDNSPADAQKTTSTASAPSFDTDIFSKFVDSAQQKIDDFQQ----SVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPSMF 263
            VRM +  +        T S++   S D     +++     K+ ++++    SV+ +D  K+    K+    LVDN + G+WL+RGE++G IQL  + F+L+    +D L NFL GP   + G  +  K+  DLG  Q+SIWP P P  EL+TDGLY+YVRHP+YAGVLLAS G+A AT SPSR  LT+ F  F  +KI VEE+FL+++Y GY+ Y + V FKL+P +F
Sbjct:   45 VRMMSASEEQSGSRTTTDSSSEVYSLDGSESPQWIQDMNLKLQEYKEQLTKSVEGLDADKVTAGGKK----LVDNLIQGEWLSRGEVFGGIQLALLYFLLQDSRMMDGLANFLFGPICLLAGGAVCVKAFVDLGISQISIWPKPAPGAELRTDGLYQYVRHPIYAGVLLASLGWAGATHSPSRFLLTLGFAYFFARKIAVEEEFLEETYEGYKSYKEAVPFKLIPRIF 268          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A7S0BQP8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQP8_9RHOD)

HSP 1 Score: 177 bits (448), Expect = 4.540e-51
Identity = 96/211 (45.50%), Postives = 135/211 (63.98%), Query Frame = 0
Query:   54 QKTTSTASAPSFDTDIFSKFVDSAQQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSY-PGYEEYMQEVTFKLLPSMF 263
            QK +ST    S +  + +  V+  Q K D+    ++ +D  +L +    +S  L++NFL+GDWL RGE YG +QL   + +LR  G LD LV F+ GP L + GA +  KSV DLG  QLSIWP P P   L+T+G+Y  VRHP+Y+GVLL++ G+AVAT SP+R+ALT A   F M+KI +EE+FL++ Y   Y +Y + V FKL P +F
Sbjct:   57 QKVSSTPEYGSQEL-VSADLVEKLQSKFDESLTQIKNIDVEELGETATGSSKTLLNNFLSGDWLQRGETYGFLQLGLALMLLRPQGGLDGLVTFMFGPVLLLGGAFVCVKSVLDLGLGQLSIWPKPTPDSVLRTEGIYAQVRHPIYSGVLLSTIGYAVATGSPARMALTGALAYFFMRKIQIEEEFLEEKYGDDYTDYQENVPFKLFPKVF 266          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A5J4YSJ9 (Cobalt-zinc-cadmium resistance protein CzcN n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSJ9_PORPP)

HSP 1 Score: 176 bits (447), Expect = 1.010e-50
Identity = 92/182 (50.55%), Postives = 117/182 (64.29%), Query Frame = 0
Query:   81 IDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPSM 262
            ++D    ++ VD   +VDD  +AS  L DNF+AG+WL RGE+YGA QLV    +L G   +D L + L GP LFI GAV+S K++ DLG   LS+WP PV  G L T GLYE VRHP+Y+GVLL S G A AT S    ALT A  A  +KKI+VEE+FLK+ YP Y  Y     +KL+P +
Sbjct:  100 MEDVTAKLENVDPDAVVDDIGKASTTLFDNFMAGEWLKRGEVYGAAQLVLAFMMLTGQPLVDALASLLLGPGLFISGAVLSGKALVDLGIPNLSLWPRPVSKGTLVTTGLYEKVRHPVYSGVLLVSLGNAAATHSAGSFALTAALAALFVKKIEVEEEFLKEKYPEYSSYQISTPYKLIPKV 281          
BLAST of Ggra5798.t1 vs. uniprot
Match: M2W2N2 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W2N2_GALSU)

HSP 1 Score: 148 bits (373), Expect = 1.120e-39
Identity = 77/187 (41.18%), Postives = 118/187 (63.10%), Query Frame = 0
Query:   78 QQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSY-PGYEEYMQEVTFKLLPSMF 263
            +QK+ +F    + +    ++D  K  +  L  N  AG+ L+RGE Y A+QL+ ++ ILR  G  D L+NF+ GP   I G  I  K+  DLG +QL+ WP+PVP  +L+T+GLY +VRHPMY GV+LAS GF+  T S  RL L++     L+KK++VEE FL+  +   Y+ Y ++V ++++P +F
Sbjct:   96 EQKLQEFTNYFKNIKLEGVLDQAKATAKVLWANLAAGEALSRGEPYAALQLIVLLLILREPGSTDALINFILGPCTLITGLSILFKAAVDLGKEQLTPWPAPVPQSQLRTEGLYRFVRHPMYLGVVLASFGFSGTTNSSERLLLSLGLLYLLIKKVEVEETFLEKKFGEEYKSYREKVPYRIIPKVF 282          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A2V3ICI6 (Cobalt-zinc-cadmium resistance protein CzcN n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICI6_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.170e-37
Identity = 65/95 (68.42%), Postives = 79/95 (83.16%), Query Frame = 0
Query:  168 LGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPSM 262
            +G KQLSIWP+PVP GEL+T   YEYVRHPMY+ V+LAS GF VAT SP+RLAL+IAF AF  + IDVEEQFLKD+YPGYEEY +EV  K++P++
Sbjct:    1 MGLKQLSIWPAPVPNGELRTSEAYEYVRHPMYSDVVLASVGFVVATGSPARLALSIAFAAFSSRNIDVEEQFLKDAYPGYEEYSEEVPHKMIPTI 95          
BLAST of Ggra5798.t1 vs. uniprot
Match: A0A1Z5KFP6 (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFP6_FISSO)

HSP 1 Score: 114 bits (284), Expect = 1.470e-26
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = 0
Query:   78 QQKIDDFQQSVQEVDTSKLVDDTKQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGG-GFLDLLVNFLAGPALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYAGVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEYMQEVTFKLLPS 261
            + K+ + + ++   DT+K++    ++S  L +N ++G++  RGE Y   Q   + FI+ G   FL  L++ + GP L + G  +   +V D+G   LS WP P    ELKTDG+Y  VRHPMYAGVL A AG+++ T S  RL LT+A    L +K + EE+ L+ ++P Y+ Y + V  K  PS
Sbjct:   85 RDKLAELRNNLPSFDTNKIM----ESSNALKENLMSGEFGTRGEGYVVAQFSLMAFIVVGTVPFLGDLLSIVLGPGLLLTGLAVMVLAVQDIGG-ALSPWPVPSDNAELKTDGIYGQVRHPMYAGVLAACAGYSLMTGSAWRLLLTVALWKVLEEKSNYEEEQLQQAFPAYKAYQKLVPGKFFPS 264          
The following BLAST results are available for this feature:
BLAST of Ggra5798.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUX41.550e-11969.58Cobalt-zinc-cadmium resistance protein CzcN n=1 Ta... [more]
R7QUE49.660e-8660.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NWT91.440e-5945.98Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1XJW41.220e-5346.35Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1TEK52.140e-5242.54Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0BQP84.540e-5145.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSJ91.010e-5050.55Cobalt-zinc-cadmium resistance protein CzcN n=1 Ta... [more]
M2W2N21.120e-3941.18Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A2V3ICI61.170e-3768.42Cobalt-zinc-cadmium resistance protein CzcN n=2 Ta... [more]
A0A1Z5KFP61.470e-2637.84Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.1630coord: 110..262
e-value: 2.8E-22
score: 81.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..45
NoneNo IPR availablePANTHERPTHR12714:SF21S-ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 85..260
NoneNo IPR availablePANTHERPTHR12714PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 85..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..147
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..121
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 199..221
IPR007318Phospholipid methyltransferasePFAMPF04191PEMTcoord: 146..244
e-value: 6.5E-12
score: 45.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:337181..337972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5798.t1Ggra5798.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 337181..337972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5798.t1 ID=Ggra5798.t1|Name=Ggra5798.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=264bp
MFKAAFVSSFCAGLRPTQRLALHERDGAPLHRRSTSRRRVRMNADPDNSP
ADAQKTTSTASAPSFDTDIFSKFVDSAQQKIDDFQQSVQEVDTSKLVDDT
KQASLGLVDNFLAGDWLNRGELYGAIQLVFVIFILRGGGFLDLLVNFLAG
PALFIVGAVISAKSVFDLGPKQLSIWPSPVPAGELKTDGLYEYVRHPMYA
GVLLASAGFAVATASPSRLALTIAFGAFLMKKIDVEEQFLKDSYPGYEEY
MQEVTFKLLPSMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007318Phopholipid_MeTrfase