Ggra5777.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5777.t1
Unique NameGgra5777.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length134
Homology
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A2V3ISU3 (AP-1 complex subunit mu n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISU3_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 9.290e-51
Identity = 92/128 (71.88%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    3 MSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLE-------------ELISPPSMLNRVFEQLGAGAAVRTNPPSRFSWRRGNVSYAQNEIFVDVIKAIDATFEAAHRSLSHLLVSSVVQVN 117
            +SQFLTS AE  VDYFGEI+EHAIKDNFVTVYELLD+ML+             ELISPPSMLNRVFEQLGA   V  N PS F+WRRGNVSYAQNEIFVDV++ IDATFEA+HR LSHLLV+ VVQ+N
Sbjct:   66 ISQFLTSLAEILVDYFGEINEHAIKDNFVTVYELLDEMLDNGFPATLESNMLKELISPPSMLNRVFEQLGAETPVPVNAPSLFTWRRGNVSYAQNEIFVDVVETIDATFEASHRRLSHLLVTGVVQIN 193          
BLAST of Ggra5777.t1 vs. uniprot
Match: R7QE13 (AP-3 complex subunit mu n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE13_CHOCR)

HSP 1 Score: 138 bits (348), Expect = 2.190e-36
Identity = 74/133 (55.64%), Postives = 95/133 (71.43%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLE-------------ELISPPSMLNRVFEQLGAGAA---VRTNPPSRFSWRRGNVSYAQNEIFVDVIKAIDATFEAAHRSLSHLLVSSVVQVN 117
            +F++QFL S A+ FVDYFGE++EHAIKDNF+TVYELL++ML+             ELI+PPSM+NRVFE LGA +A     +    R  WRR +V YAQNEIFVDVI+ I AT+ A  R+LS LL++ VV+VN
Sbjct:   79 LFVTQFLESLADVFVDYFGELNEHAIKDNFITVYELLEEMLDNGFPLTVEPNTLKELITPPSMINRVFESLGADSAKTATMSYASPRTPWRRADVKYAQNEIFVDVIETIHATYSATRRNLSQLLIAGVVKVN 211          
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A163JBG5 (MHD domain-containing protein n=2 Tax=Absidia TaxID=4828 RepID=A0A163JBG5_ABSGL)

HSP 1 Score: 86.3 bits (212), Expect = 3.530e-17
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDM-------------LEELISPPSMLNRVFEQLGAGAAVRTNPPSRFS---WRRGNVSYAQNEIFVDVIKAIDATFEA 100
            M + +FL    +   DY G+I E +I++NFV VY+LL++M             L+E+I PP+M+N+V   + A A V    P   S   WR+  V Y QNEI+ D+I+ IDATF A
Sbjct:   98 MLVFEFLHRIIDVLTDYLGDISEASIRENFVIVYQLLEEMMDYGYPLTTEPNALKEIIMPPTMINKVMNTVNAAAGVAPKVPQNMSNIPWRKSGVKYTQNEIYFDIIEEIDATFAA 213          
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A1X2HL67 (AP-3 complex subunit MU-1 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2HL67_9FUNG)

HSP 1 Score: 84.3 bits (207), Expect = 1.720e-16
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDM-------------LEELISPPSMLNRVFEQLGAGAAVRTNPPSRFS---WRRGNVSYAQNEIFVDVIKAIDATFEA 100
            M + +FL    +   DY G+I E +I++NFV VY+LL++M             L+E+I PP+M+N+V   + A A V    P   S   WR+  V Y QNEI+ D+I+ IDAT  A
Sbjct:   98 MLVFEFLHRIIDVLTDYLGDISESSIRENFVIVYQLLEEMMDYGYPLTTEPNALKEIIMPPTMINKVMTTVNAAAGVAPKVPQNMSNIPWRKAGVKYTQNEIYFDIIEEIDATISA 213          
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A6B2L5F7 (MHD domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5F7_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 1.070e-15
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    5 QFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDM-------------LEELISPPSMLNRVFEQ-LGAGAAVRTNPP----SRFSWRRGNVSYAQNEIFVDVIKAIDATFEA 100
            +FLT  +  F DYFG ++EH ++DNF+T Y+LL++M             L ++I  P+++N+     LG G  ++++ P    SR  WR+ NV Y  NEI++D+I  IDA  E+
Sbjct:   82 EFLTRVSSIFSDYFGNLNEHVLRDNFITAYQLLEEMNDGGHPFNLEPNILTDMIEVPNLINQTAGMVLGPGNTIKSSLPDSTLSRVPWRKANVKYTTNEIYIDIIDEIDAIIES 195          
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A6G0TYR9 (Uncharacterized protein n=1 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0TYR9_APHGL)

HSP 1 Score: 78.6 bits (192), Expect = 2.300e-15
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLE-------------ELISPPSML----NRVFEQLGAGAAVRTNPPSRFSWRRGNVSYAQNEIFVDVIKAIDATFE 99
            +F+ +FL    +TF DYF E  E+ +KDN+V VYELLD+ML+             ELI PP++L    N V  +    A + +   S   WRR  V Y  NE + DVI+ +DA  +
Sbjct:   77 LFVIEFLHRVVDTFEDYFSECSENVVKDNYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANSVTGKSNVSATLPSGQLSNVPWRRSGVKYTNNEAYFDVIEEVDAIID 192          
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A8J2P403 (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2P403_9HEXA)

HSP 1 Score: 79.3 bits (194), Expect = 2.890e-15
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLE-------------ELISPPSMLNRVFEQLGAGAAVRTNPPS----RFSWRRGNVSYAQNEIFVDVIKAIDATFE 99
            +F+ +FL    +TFVDYFGE  E  IK++FV +YELLD+ML+             ELI PP++L  +   +   + V    PS       WRR  V YA NE + DV++ +DA  +
Sbjct:   77 LFVIEFLHRVVDTFVDYFGECTESIIKEHFVIIYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVSCTLPSGQLSNIPWRRSGVKYANNEAYFDVVEEVDAIID 192          
BLAST of Ggra5777.t1 vs. uniprot
Match: O76928 (Carmine, isoform A n=31 Tax=Drosophilinae TaxID=43845 RepID=O76928_DROME)

HSP 1 Score: 79.7 bits (195), Expect = 7.180e-15
Identity = 45/116 (38.79%), Postives = 62/116 (53.45%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLE-------------ELISPPSMLNRVFEQLGAGAAVRTNPPS----RFSWRRGNVSYAQNEIFVDVIKAIDATFE 99
            +F+ +FL    +TF DYFG+  E  IKDN+V VYELLD+ML+             ELI PP++L  +   +   + V T  PS       WRR  V Y  NE + DVI+ +DA  +
Sbjct:   75 LFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVSTTLPSGQLSAVRWRRSGVRYTNNEAYFDVIEEVDAIID 190          
BLAST of Ggra5777.t1 vs. uniprot
Match: A0A8H7QBX3 (MHD domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7QBX3_9FUNG)

HSP 1 Score: 79.3 bits (194), Expect = 1.230e-14
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   15 VDYFGEIDEHAIKDNFVTVYELLDDM-------------LEELISPPSMLNRVFEQLGAGAAVRTNPP----SRFSWRRGNVSYAQNEIFVDVIKAIDATFEA 100
            VDY G++ E +I+DNFV VY+LL++M             L+++I PP+++N+V   + A + V    P    S   WR+  V YAQNEI+ D+I+ +DAT EA
Sbjct:  357 VDYLGDVSEVSIRDNFVIVYQLLEEMMDYGYPLTTEPNALKQIILPPTIMNKVMNTVVAASGVGQKLPQSTMSSIPWRKAGVKYAQNEIYFDIIEEVDATIEA 459          
BLAST of Ggra5777.t1 vs. uniprot
Match: AP-3 complex subunit mu-1 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9757 (AP-3 complex subunit mu-1 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9757)

HSP 1 Score: 79.0 bits (193), Expect = 1.350e-14
Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 0
Query:    1 MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLE-------------ELISPPSMLNRVFEQLGAGAAVRTNPP----SRFSWRRGNVSYAQNEIFVDVIKAIDATFE 99
            +F+ +FL    ETF DYF E +E  IKDNFV VYELL++ML+             ELI PP+++  V   +  G  V    P    S   WRR  V Y  NE + DVI+ +DA  +
Sbjct:   77 LFVIEFLHRVVETFEDYFSECNETIIKDNFVIVYELLEEMLDNGFPLATESNILKELIRPPNIIRTVVNSVIGGTNVSDQLPTGQLSNVPWRRSGVKYTNNEAYFDVIEEVDAIID 192          
The following BLAST results are available for this feature:
BLAST of Ggra5777.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISU39.290e-5171.88AP-1 complex subunit mu n=1 Tax=Gracilariopsis cho... [more]
R7QE132.190e-3655.64AP-3 complex subunit mu n=1 Tax=Chondrus crispus T... [more]
A0A163JBG53.530e-1739.66MHD domain-containing protein n=2 Tax=Absidia TaxI... [more]
A0A1X2HL671.720e-1638.79AP-3 complex subunit MU-1 n=1 Tax=Absidia repens T... [more]
A0A6B2L5F71.070e-1536.84MHD domain-containing protein n=1 Tax=Arcella inte... [more]
A0A6G0TYR92.300e-1537.93Uncharacterized protein n=1 Tax=Aphis glycines Tax... [more]
A0A8J2P4032.890e-1537.93Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
O769287.180e-1538.79Carmine, isoform A n=31 Tax=Drosophilinae TaxID=43... [more]
A0A8H7QBX31.230e-1439.81MHD domain-containing protein n=1 Tax=Umbelopsis v... [more]
AP-3 complex subunit mu-1 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB97571.350e-1439.66AP-3 complex subunit mu-1 n=1 Tax=Saccoglossus kow... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.60coord: 1..43
e-value: 1.7E-10
score: 43.1
NoneNo IPR availableGENE3D2.60.40.1170Mu homology domain, subdomain Bcoord: 68..128
e-value: 5.6E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR10529AP COMPLEX SUBUNIT MUcoord: 2..100
NoneNo IPR availablePANTHERPTHR10529:SF342AP-3 COMPLEX SUBUNIT MU-1coord: 2..100
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..41
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 73..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:214016..214417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5777.t1Ggra5777.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 214016..214417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5777.t1 ID=Ggra5777.t1|Name=Ggra5777.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MFMSQFLTSRAETFVDYFGEIDEHAIKDNFVTVYELLDDMLEELISPPSM
LNRVFEQLGAGAAVRTNPPSRFSWRRGNVSYAQNEIFVDVIKAIDATFEA
AHRSLSHLLVSSVVQVNRDSRVVTLSSVRILAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
IPR036168AP2_Mu_C_sf