Ggra5755.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5755.t1
Unique NameGgra5755.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length411
Homology
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A2V3IVT7 (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR)

HSP 1 Score: 296 bits (758), Expect = 3.590e-92
Identity = 180/413 (43.58%), Postives = 237/413 (57.38%), Query Frame = 0
Query:    1 MGVRTLDYLQLSQRHSASSPTLWSETRGNCPAHARYDVCKIFPSIKSF-GSLSNDVAICNQLSDWVRSDAAEEWQTNPKVVISDDIQRFLRDVLVATQCGENSFWRNCQIMEDKQHHLDLPSG-SESDS-SPPTDFVPHFTPAPIPEASYPVTDSTDSNAETIDSSDEDTYGGSNSNSAEGEAVTSIPSEATNTEASNESMGGALSNSSSDTSSETIAEGDSVFTDGDGSYRPPILQGIRSCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRTENHSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLGVERVVAVEREC-EWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFRGAFLTFRKCWWLRWLLRDGLQSLLFWN 409
            MGV+  D+ QLS+ HSASSPTLWS TRGNCPAHARYDVCK+ PSI +F    S    IC  L+ W+ + AAE+WQTNP+V ++ DI++FL  +LVAT CG+   W +CQ ME KQHHLDLP+G  ++D+ S   D VP  TPAP  E   PV + +     T  SS +DT           +A+T   S                              G     D  G++  P+L GIRSCFPAS+ V RRDG  +RM+ + VGDE+ V    +S VYAFSHR    YS+FV++R +N S+ L+  H +  N   K AR V++GD + G  G E +V   R   +WGL+N HT +G++VV+G+LCS FT AV V  AQGLL  FR  F    + W L  ++R  +   L W 
Sbjct:  131 MGVKQGDFAQLSKAHSASSPTLWSATRGNCPAHARYDVCKVLPSIATFTADKSKTKPICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQHHLDLPAGFDDADATSEEGDVVPRPTPAPGGEIDLPVAEPSS----TYSSSPQDTT----------QALTGDSSSXXXXXXXXXXXXXXXEXXXXXXXXXXXXNGG--VEDNSGTFNLPLLSGIRSCFPASARVLRRDGRRIRMDQVSVGDEIEVGENNFSAVYAFSHRVSRAYSQFVELRWKNGSVALTGGHRIRSNGELKVARDVREGDVIYGADGSELIVEDTRMVWDWGLYNAHTFEGEVVVNGVLCSTFTEAVEVGVAQGLLTPFRALFRMGVRGWVLDDVVRHEVFDSLSWR 527          
BLAST of Ggra5755.t1 vs. uniprot
Match: R7QFW8 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR)

HSP 1 Score: 191 bits (484), Expect = 2.120e-52
Identity = 139/419 (33.17%), Postives = 191/419 (45.58%), Query Frame = 0
Query:    1 MGVRTLDYLQLSQRHSASSPTLWSETRGNCPAHARYDVCKIFPSIKSFGSLSND--VA--ICNQLSDWVRSDAAEEWQTNPKVVISDDIQRFLRDVLVATQCGENSFWRNCQIMEDKQHHLDLPSGSESDSSPPTDFVPHFTPAPI-------------------PEASYPVTDSTDSNAETIDSSDEDTYGGSNSNSAEGEAVTSIPSEATNTEASNESMGGALSNSSSDTSSETIAEGDSVFTDGDGSYRPP--------ILQGIRSCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIR--TENHSLLLSTEHYLFVNEREKHARLVKKGDCV----RGLLGVERVVAVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFR 382
            MG R  DY  L+  HS + PTLW E RGNCPAHA++DVCK+ P+++ F    +   VA  IC +L +W +S  A +W  NP+  I  D++RFL  +LVAT C     W  C  MEDKQ +LDLP G++    PP   VP  T  P                    PE +     STDS +                                      + +    S S +DTS                             I++G  SCFPA+STV    G  + M D+ +G  + VS   +SPV+ FSHR+ +    +++I   T NH+L +++ HYL +N +   A   K GD +     G   V  V  V+     GL+NPHT+ G +VVDG + S +T AVP   A GLLA  R
Sbjct:   20 MGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELVAPKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNLDLPEGAD----PPE--VPVITRPPXXXXXXXXXXXXXXXXXXXEPEETGTTPASTDSESTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEDDLS-EESGSDNDTSXXXXXXXXXXXXXXXXXXXXXXXEQGTSSIIEGTASCFPATSTVELASGARIPMSDLRIGHSVRVSTHAFSPVFLFSHRTSSSAPSYIQITPTTGNHTLTVTSGHYLHINRQLLPAAAAKVGDHILTADHGWAPVAAVRIVQAN---GLYNPHTLQGDLVVDGFVTSTYTTAVPRRIATGLLAPLR 428          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A2V3IEV2 (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR)

HSP 1 Score: 172 bits (435), Expect = 1.080e-43
Identity = 138/452 (30.53%), Postives = 202/452 (44.69%), Query Frame = 0
Query:    1 MGVRTLDYLQLSQRHSASSPTLWSETRGNCPAHARYDVCKIFPSIKSFGSLSNDVAI----CNQLSDWVRSDAAEEWQTNPKVVISDDIQRFLRDVLVATQCGENSFWRNCQIMEDKQHHLDLPSGSESDSSPPTDFVPH-------------FTPAPIPEA-SYPVTDSTDSNAETIDSSDEDTYGGSN--------------------------------------SNSAEGEAV---TSIPSEATNTEASNESMGGALSNSSSDTSSETIAEGDSVFTDGDGSYRPPILQGIRSCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEF-VKIRTENHSLLLSTEHYL-FVNEREKHARLVKK-----GDCVRGLLG-VERVVAVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFRGAF 385
            MG+   DY  L   HS  +PTLW+  RGNCPAHA+YD+C + PS+++F        +    C  L+ W+ S  +  WQTNP   I   ++ FL D L A +C     WR C  MED Q+H+D+P   +S  +P  D +                TP  +P + + PV  STDS      SS+ D                                            S  A+ E+    T +  E T         GGA++   SDT      + +  +    GS  P       SCFPAS+TV    G  + M  + +GD + VS+ ++S VY FSHR      E+ V+I T + S+++++ HYL   N   K + LV+      GD +    G + RV  V     +GL+NPHT+ G I VDG++ S FT ++   AA  +L+  R  +
Sbjct:  267 MGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKVMPPACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHIDIPGSIQS--APAADDIEETNDVNDGVVDSSGVTPGNVPVSPAEPVDTSTDS----ATSSEPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXSTIAQAESAGGATPVVEETTPV------TGGAIT---SDTPITVGGQENGAY----GSPSPTPSADGDSCFPASATVELASGAHIPMHKLRIGDRVRVSSSEFSDVYMFSHRDITATEEYYVRISTLDTSVIMTSGHYLPIANNNTKDSVLVQAHSVQIGDHIHTASGKLSRVTEVLLAKAYGLYNPHTVAGTICVDGVVTSTFTRSLSSKAAHAMLSPIRAMY 699          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A7S1T7F0 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7F0_9RHOD)

HSP 1 Score: 111 bits (277), Expect = 6.010e-23
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 0
Query:  237 RSCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRT-ENHSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLGVERVVAVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFR 382
            R+CFP  + V   DG    M+++ VGD +L  +G +SPV+ FSHR       F++I T +N  + LS  H LFVN R + A++ + GD + G L    + +V      GLFNPHT++G +VVD +  SC+T AVP   A  LLA  R
Sbjct:  367 RACFPGDAVVHLEDGSTKMMKELNVGDHILTDSGVFSPVFYFSHRLQEGLFHFIEIHTSDNRRIHLSPSHKLFVNGRLQEAKVARVGDSL-GRLKPGVISSVAHRTLQGLFNPHTLEGSLVVDQIEASCYTSAVPTNLAHSLLAFER 512          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A2V3IVL1 (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVL1_9FLOR)

HSP 1 Score: 111 bits (277), Expect = 7.670e-23
Identity = 60/147 (40.82%), Postives = 92/147 (62.59%), Query Frame = 0
Query:  236 IRSCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIR--TENHSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLGVERVV--AVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLL 378
            I +CFPAS+ VRR DG +L ME + V + + V  G++S ++ F HR+ +  SEFV IR    +  L +S +HYL+VN +   A+ V+ GD +RG  GV+ V+  AV+RE   GL+ P ++ G ++VD ++ S +T A+P   A  LL
Sbjct:  400 IDTCFPASAAVRRHDGAVLTMEQLAVAERIAVGAGQHSDLFFFGHRAPHAVSEFVSIRHGASDKPLRISPQHYLYVNGKLGTAKTVRVGDRLRGADGVDNVLVTAVDREAHRGLYAPTSMHGDLLVDDIVVSSYTSALPPHLAHKLL 546          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A2V3IGP9 (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 1.440e-22
Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 0
Query:  238 SCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRTEN-HSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLGVERVVAVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFRGAF 385
            +CFPA +TV   DG    M+ IE+GD + V++G++SPV+ F+H+   +   FV++   + HSL L+  HYL+VN     A  V  GD +    GV  V AV R    GL+NP T++G IVV+G+  S +T AV +  A  LL   R  F
Sbjct:  305 ACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVF 453          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A7S1T873 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T873_9RHOD)

HSP 1 Score: 108 bits (270), Expect = 1.510e-22
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 0
Query:  238 SCFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRTENHSLLLSTEHYLFVNERE-KHARLVKKGDCVRGLLGVER-VVAVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFR 382
            +CFPASSTV    G + +ME++E+GD ++ S+G YSPV+ F HR  N +  F+++ TEN  L LS  HY+++ +   + A  V+ GD +    G  R V  ++   E GLFNPHT  G +VVDG   SC+T  V    A  LLA  R
Sbjct:  215 TCFPASSTVITLSG-LRKMEELELGDSVMTSDGSYSPVFFFGHREPNTWHNFIELETENGKLTLSPSHYVYLLDGTMRTAASVQIGDTLVSASGKAREVTGLKNIRERGLFNPHTSSGHLVVDGFKVSCYTETVNPHVAHVLLAPLR 360          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A5J4Z173 (Warthog protein 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z173_PORPP)

HSP 1 Score: 109 bits (273), Expect = 4.120e-22
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 0
Query:  239 CFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRTENHSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLG-VERVVAVER-ECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFR 382
            CFPA + VR R G ++RME++E+GD++ + NG YSPVY F HR    Y E+++I T + +L +S  H +F N R   A  V   D V    G VE V++V   +   GLF+PHT+ G + VD +L S  T A P   A  LL  FR
Sbjct:  912 CFPADAVVRMRSGALVRMEELELGDQISIGNGVYSPVYFFGHRDSKGYGEYLEIATRSATLRISARHLMFANGRTIAASQVGVDDVVELENGLVETVISVSTPKLLRGLFSPHTLHGSLTVDTVLVSSHTRACPEFVAVALLLPFR 1057          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A2V3IXZ1 (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXZ1_9FLOR)

HSP 1 Score: 106 bits (265), Expect = 6.910e-22
Identity = 62/151 (41.06%), Postives = 91/151 (60.26%), Query Frame = 0
Query:  238 SCFPASSTVRRRDGVILRMEDIEVGDELLVS-NGKYSPVYAFSHRSHNVYSEFVKIRTEN-HSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLGV-ERVVAVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFRGAF 385
            SCFP  + V   DG I+ M++++VGD +L S +G YS ++ F+H+  +V + FVKI T +  +LLLS  HYLFV+++ K A     GD V    G  +R+V ++     GL NP T+DG IVV+G+L + +T A P   A  LL   RG +
Sbjct:  206 SCFPNDAFVSTEDGRIVSMKELQVGDRVLSSPDGTYSDIFMFTHKDESVAATFVKISTRSGKTLLLSEGHYLFVDDKTKTAAAAVVGDTVTLASGTKDRIVDIQIVLAKGLHNPQTLDGNIVVNGILATTWTSAAPPVTASLLLTPVRGMY 356          
BLAST of Ggra5755.t1 vs. uniprot
Match: A0A2V3J2J0 (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 1.260e-21
Identity = 55/151 (36.42%), Postives = 91/151 (60.26%), Query Frame = 0
Query:  239 CFPASSTVRRRDGVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRTEN-HSLLLSTEHYLFVNEREKHARLVKKGDCVRGLLGVERVV-AVERECEWGLFNPHTIDGQIVVDGLLCSCFTGAVPVTAAQGLLALFRGAFLT 387
            CFPA + VR  DG + RM+ +++GD + V NG YSP++ F+H+   +   FV I+T+  HSL L++ H+++ N+    A  V+ GD V+   G + +V AV +    GL+NP T+ G ++V+G+  + +T A+ +T A  LL   R  + T
Sbjct:  214 CFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFVIIQTDKQHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNGVRVTTYTSAIHLTLAHSLLTPLRAFYQT 364          
The following BLAST results are available for this feature:
BLAST of Ggra5755.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVT73.590e-9243.58Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QFW82.120e-5233.17HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IEV21.080e-4330.53Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A7S1T7F06.010e-2340.82Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IVL17.670e-2340.82Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]
A0A2V3IGP91.440e-2240.27Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7S1T8731.510e-2242.18Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z1734.120e-2242.47Warthog protein 4 n=1 Tax=Porphyridium purpureum T... [more]
A0A2V3IXZ16.910e-2241.06Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]
A0A2V3J2J01.260e-2136.42Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 237..329
e-value: 2.2E-13
score: 60.5
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 239..366
e-value: 1.9E-30
score: 108.2
NoneNo IPR availablePIRSRPIRSR009400-2PIRSR009400-2coord: 238..383
e-value: 9.9E-20
score: 68.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..226
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 237..382
NoneNo IPR availableCDDcd00081Hintcoord: 239..364
e-value: 5.04757E-17
score: 75.3833
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 238..382
e-value: 2.3E-21
score: 76.3
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 239..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:655326..656558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5755.t1Ggra5755.t1Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 655326..656558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5755.t1 ID=Ggra5755.t1|Name=Ggra5755.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=411bp
MGVRTLDYLQLSQRHSASSPTLWSETRGNCPAHARYDVCKIFPSIKSFGS
LSNDVAICNQLSDWVRSDAAEEWQTNPKVVISDDIQRFLRDVLVATQCGE
NSFWRNCQIMEDKQHHLDLPSGSESDSSPPTDFVPHFTPAPIPEASYPVT
DSTDSNAETIDSSDEDTYGGSNSNSAEGEAVTSIPSEATNTEASNESMGG
ALSNSSSDTSSETIAEGDSVFTDGDGSYRPPILQGIRSCFPASSTVRRRD
GVILRMEDIEVGDELLVSNGKYSPVYAFSHRSHNVYSEFVKIRTENHSLL
LSTEHYLFVNEREKHARLVKKGDCVRGLLGVERVVAVERECEWGLFNPHT
IDGQIVVDGLLCSCFTGAVPVTAAQGLLALFRGAFLTFRKCWWLRWLLRD
GLQSLLFWNQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf