Ggra5736.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5736.t1
Unique NameGgra5736.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length483
Homology
BLAST of Ggra5736.t1 vs. uniprot
Match: A0A2V3IIC8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIC8_9FLOR)

HSP 1 Score: 147 bits (371), Expect = 8.930e-36
Identity = 73/176 (41.48%), Postives = 99/176 (56.25%), Query Frame = 0
Query:   87 MHGFHNVEFFSPPNKERTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITRNHDRYYLIWSIALAEWAVLVAILALQAASDGIDWDCRSREAEIYRDGVQPPGRMFFIPPRVIRDIRLFGLGTIVAGTDYYIEQLESLLTQVESFPWGAKQGWEVFDPVSWKVVSRAKQRYPG 262
            MHG+H +E+F    + R  WYV +P WWN YE P  + VPTP VLAYFG         Y+ IWS+A+ +WAVLV++LAL+A    I W+    E   Y    QP GR++ +P ++I+ IR  G+  IVA T Y    L++ L   E+  WG  Q  EV+D    +V S   Q  PG
Sbjct:    1 MHGYHLIEYFPQSTEARRQWYVQQPRWWNEYEAPQWVLVPTPLVLAYFGRLTREGSPCYHTIWSVAMCKWAVLVSMLALEAGRHDITWNLPCPETAFYSHEFQPVGRLYRLPMQLIQLIRCLGISDIVARTGYTENHLDNYLRAAENHRWGPDQVCEVWDHDRQRVSSPGDQALPG 176          
BLAST of Ggra5736.t1 vs. uniprot
Match: A0A2V3IV02 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV02_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 6.540e-25
Identity = 86/254 (33.86%), Postives = 121/254 (47.64%), Query Frame = 0
Query:   47 LHLVCFDRPYNTIHWANRRRWGVDAATEARIRTRSSFNRVMHGFHNVEFFSPPNKERTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITRNHDRYYLIWSIALAEWAVLVAILALQAASDGIDWDCRSREAEI--YR------DGVQPPG--RMFFIPPRVIRDIRLFGLGTIVAGTDYYIEQLESLLTQVESFPWGAKQGWEVFDPVSWKVVSRAKQRYPGAPTDQ---------GPPGSPEPFPTVVE 281
            L LV F RPY+ ++W NRRRWG + ATEAR+R  S+ +  M  + N+EFF     +R   YV  P+ W  ++V   LSV  PPVLAY+   + R       +  IA+AEWAV   +  LQAAS+G+    R+ +  +  +R      +  +PPG  R+F +P  ++  +   GL  ++ GT Y  E     L       W    G+  FDP      +      P  PTD          GP   P  FP V E
Sbjct:  236 LQLVMFSRPYDRMYWLNRRRWGDNIATEARLR--SNRDGYMFCWQNIEFFDVSPADREKLYVRAPQNWGEFDVTRDLSVIIPPVLAYYSGEVLRESALSERVMRIAIAEWAVCALMAFLQAASEGVRVFTRTEDPRVNFFRGFPRQPNTREPPGLGRLFPLPYGLVSLVMQMGLENVLRGTIYATETARRWLYLSVMTDWVVTPGYLWFDP-----RTETFPEMPRIPTDPFPLTHRLQLGPVRPPWDFPNVAE 482          
The following BLAST results are available for this feature:
BLAST of Ggra5736.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIC88.930e-3641.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV026.540e-2533.86Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..482
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..482
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:412128..413724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5736.t1Ggra5736.t1Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 412128..413724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5736.t1 ID=Ggra5736.t1|Name=Ggra5736.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=483bp
MRYFIPPLYPSDLPYVRIEPELHYYRRLVVKICQYDSLPQQYLPASLHLV
CFDRPYNTIHWANRRRWGVDAATEARIRTRSSFNRVMHGFHNVEFFSPPN
KERTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITRNHDRYYLIWS
IALAEWAVLVAILALQAASDGIDWDCRSREAEIYRDGVQPPGRMFFIPPR
VIRDIRLFGLGTIVAGTDYYIEQLESLLTQVESFPWGAKQGWEVFDPVSW
KVVSRAKQRYPGAPTDQGPPGSPEPFPTVVESPAATPVVTSAPTPAPEGR
NTPALTGVTPLHPSTTRVDGPPRAILGGVMAAPAAPVPSQVDPQAISGLM
AQVELYQMAANQVAGLATAMVSTPTNPFEDPLFDASLNPGLLTTSQAPLH
IGSSVPPSLAQANAPPPMGPDVMPGVSVPTSTPVGHNSAPSQAPGQAHLF
QPWPGAHQNTTPGRGSSAGGSSGPHFATHPSG*
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