Ggra5727.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5727.t1
Unique NameGgra5727.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length222
Homology
BLAST of Ggra5727.t1 vs. uniprot
Match: R7QJT7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJT7_CHOCR)

HSP 1 Score: 155 bits (393), Expect = 5.970e-43
Identity = 105/254 (41.34%), Postives = 135/254 (53.15%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST------------------GS-------EELDVAALLDKMACFGVTGRGSPFE-VPETDKTQ-----FAGARRWGT-----TNSSSKPSTNSAFSSGFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENIQGFSKKYIDAASDYRIDLSKVPPSMRQDFAASFDPDEK 218
            MAWDQE ENHE  TVFALVP+ D++RKG++LRDR YAEI+PIAGT HLD+ DDLNL T YDGG V EKFSFDGPD+VNR+ST                  GS       EE +  ++   +A   V G G   + V E +++        G  R+G       NS ++PS+ SAF SGF+S                                    G S++ ++AA    IDL+K+PPSMR+DF ASF+   K
Sbjct:   70 MAWDQEGENHEGETVFALVPEKDNVRKGRILRDRGYAEIVPIAGTYHLDDSDDLNLSTPYDGGAVEEKFSFDGPDIVNRLSTVKRFGGYSTATFATERRVGSAPPAVWDEEKEGKSVEQMVAELMVDGPGVLIDTVDEVEESSAGGGDLVGKERFGAGLGRAANSGARPSSQSAFGSGFSSGASKKGNGEEGGAKSEE---------------HGTNGLSREVMEAAEKAGIDLAKIPPSMREDFVASFNEKNK 308          
BLAST of Ggra5727.t1 vs. uniprot
Match: A0A2V3IP80 (Chromophore lyase CpcS/CpeS 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP80_9FLOR)

HSP 1 Score: 132 bits (333), Expect = 1.700e-33
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            MAWDQE ENHE  TVFALVPDDD+ RKG++LRDR YAEI+PIAGT  LDEHD LNL T Y+GG+VVEKF+FDGPDVVNR+ST
Sbjct:  115 MAWDQEGENHEGSTVFALVPDDDNQRKGRILRDRGYAEIVPIAGTYFLDEHDALNLNTPYEGGEVVEKFAFDGPDVVNRMST 196          
BLAST of Ggra5727.t1 vs. uniprot
Match: A0A5J4YSP0 (Phycocyanobilin lyase subunit CpcS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSP0_PORPP)

HSP 1 Score: 119 bits (297), Expect = 7.460e-28
Identity = 58/83 (69.88%), Postives = 70/83 (84.34%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDD-DDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            M WDQE E+HE  TVFALVPD+  + R+G++LRDR YAEI+ IAGT  LD+ DDLNL+T YDGG+VVEKF+FDGPD+VNRVST
Sbjct:  194 MGWDQEGESHEGSTVFALVPDEGSNGRRGRILRDRGYAEIVQIAGTYFLDDGDDLNLVTPYDGGEVVEKFAFDGPDIVNRVST 276          
BLAST of Ggra5727.t1 vs. uniprot
Match: A0A1X6PFA8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFA8_PORUM)

HSP 1 Score: 107 bits (266), Expect = 1.490e-23
Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPD-DDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            MAWD E ENH   TVFALVP+ D +  +G+MLRDR YAEI+PIAGT  +D    LNLIT YDGG+VVE+F FDGPD+V+R ST
Sbjct:  199 MAWDAEGENHAGETVFALVPEPDSEGARGRMLRDRGYAEIVPIAGTYSMDAAGGLNLITPYDGGEVVERFMFDGPDMVHRAST 281          
BLAST of Ggra5727.t1 vs. uniprot
Match: phycobiliprotein lyase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001687A83B (phycobiliprotein lyase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001687A83B)

HSP 1 Score: 99.4 bits (246), Expect = 3.150e-22
Identity = 60/132 (45.45%), Postives = 74/132 (56.06%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVSTGSE--ELDVAALLDKMACFGVTGRGSPFEVPE------TDKTQFAGARRW 124
            MAWD+E+ENHE  TVFA+VPD D+ R+G+MLR+R YAEI+PIAG   LDE   L LIT Y+    VE+F F GPD+  R ST         A+   +       G GSP E         +D  QF  A  W
Sbjct:   73 MAWDKEDENHEGSTVFAIVPDSDNPREGQMLRERGYAEIVPIAGRYLLDEDGALVLITEYETMSSVERFWFAGPDLRMRTSTVKRFGGFSTASFCTESRVASGEGAGSPSEATSAPAQETSDSKQFYSALGW 204          
BLAST of Ggra5727.t1 vs. uniprot
Match: phycobiliprotein lyase n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145CCAEB (phycobiliprotein lyase n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145CCAEB)

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-21
Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            M WDQE ENHE  TVFALVPD D+ RKG++LRDR Y EI+P+ G  H+D+ D L LIT YD    +E+F F  PD+  R ST
Sbjct:   73 MGWDQEGENHEGKTVFALVPDADNPRKGRLLRDRGYGEIVPVVGQYHMDDDDGLVLITEYDTMSSIERFWFGSPDLRMRTST 154          
BLAST of Ggra5727.t1 vs. uniprot
Match: E0UHX5 (Chromophore lyase CpcS/CpeS n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UHX5_GLOV7)

HSP 1 Score: 95.5 bits (236), Expect = 8.110e-21
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            MAWD+E+ENHE  T+FAL+P+ D+ +KG +LRDR YAE +P+AG  H+DE D L L+T Y+    +E+F F  PDV  R ST
Sbjct:   73 MAWDKEDENHEGTTIFALIPEADNPKKGLLLRDRGYAETVPVAGQYHMDEEDGLVLVTEYETMTSIERFWFASPDVRMRTST 154          
BLAST of Ggra5727.t1 vs. uniprot
Match: CPXS2 (Chromophore lyase CpcS/CpeS 2 n=8 Tax=Synechocystis TaxID=1142 RepID=CPXS2_SYNY3)

HSP 1 Score: 95.1 bits (235), Expect = 9.890e-21
Identity = 44/82 (53.66%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            MAWD+E+ENHE  TVFAL+PD+D+ ++G +LR+R YAEI+PIAG  H+DE + L L+T Y+    +E+F F  PD+  R ST
Sbjct:   73 MAWDKEDENHEGTTVFALIPDEDNPQQGLLLRERGYAEIVPIAGRYHIDEEEALVLVTEYETMTTIERFWFANPDMRLRTST 154          
BLAST of Ggra5727.t1 vs. uniprot
Match: A0A401IHM9 (Chromophore lyase CpcS/CpeS n=1 Tax=Aphanothece sacrum FPU1 TaxID=1920663 RepID=A0A401IHM9_APHSA)

HSP 1 Score: 95.1 bits (235), Expect = 1.140e-20
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            MAWD+++ENH+  T+FAL+PD D+ R+G +LR+R YAEI+PIAG  HLD+ D L LIT YD    +E+F F  PD+  R ST
Sbjct:   73 MAWDKDDENHQGNTIFALIPDADNPRQGMLLRERGYAEIVPIAGRYHLDQDDALVLITEYDTMSTIERFWFVNPDLRLRTST 154          
BLAST of Ggra5727.t1 vs. uniprot
Match: A0A8J2XFG0 (Uncharacterized protein n=1 Tax=Chroococcus sp. FPU101 TaxID=1974212 RepID=A0A8J2XFG0_9CHRO)

HSP 1 Score: 94.7 bits (234), Expect = 1.420e-20
Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDEHDDLNLITSYDGGKVVEKFSFDGPDVVNRVST 82
            MAWD+++ENHE  TVFAL+PD D+ R G +LR+R YAEI+PIAG  H+DE + L LIT YD    +E+F F  PD+  R ST
Sbjct:   73 MAWDKDDENHEGTTVFALIPDADNPRAGVLLRERGYAEIVPIAGRYHMDELEGLVLITEYDTMSTIERFWFANPDLRLRTST 154          
The following BLAST results are available for this feature:
BLAST of Ggra5727.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QJT75.970e-4341.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IP801.700e-3378.05Chromophore lyase CpcS/CpeS 2 n=1 Tax=Gracilariops... [more]
A0A5J4YSP07.460e-2869.88Phycocyanobilin lyase subunit CpcS n=1 Tax=Porphyr... [more]
A0A1X6PFA81.490e-2365.06Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
phycobiliprotein lyase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001687A83B3.150e-2245.45phycobiliprotein lyase n=2 Tax=unclassified Microc... [more]
phycobiliprotein lyase n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145CCAEB2.300e-2157.32phycobiliprotein lyase n=1 Tax=Brasilonema sp. UFV... [more]
E0UHX58.110e-2153.66Chromophore lyase CpcS/CpeS n=1 Tax=Gloeothece ver... [more]
CPXS29.890e-2153.66Chromophore lyase CpcS/CpeS 2 n=8 Tax=Synechocysti... [more]
A0A401IHM91.140e-2054.88Chromophore lyase CpcS/CpeS n=1 Tax=Aphanothece sa... [more]
A0A8J2XFG01.420e-2056.10Uncharacterized protein n=1 Tax=Chroococcus sp. FP... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018536Chromophore lyase CpcS/CpeSPFAMPF09367CpeScoord: 1..83
e-value: 5.6E-18
score: 65.3
IPR012674CalycinGENE3D2.40.128.20coord: 1..91
e-value: 2.3E-13
score: 52.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:142857..143611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5727.t1Ggra5727.t1Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 142857..143611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5727.t1 ID=Ggra5727.t1|Name=Ggra5727.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=222bp
MAWDQEEENHECFTVFALVPDDDDIRKGKMLRDRRYAEIIPIAGTCHLDE
HDDLNLITSYDGGKVVEKFSFDGPDVVNRVSTGSEELDVAALLDKMACFG
VTGRGSPFEVPETDKTQFAGARRWGTTNSSSKPSTNSAFSSGFTSRSTKN
MAKNPSVNSTFSSSFGNSSNGTTKESPENIQGFSKKYIDAASDYRIDLSK
VPPSMRQDFAASFDPDEKKST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018536CpcS/CpeS
IPR012674Calycin