Ggra5719.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5719.t1 vs. uniprot
Match: A0A2V3IS27 (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS27_9FLOR) HSP 1 Score: 228 bits (581), Expect = 7.450e-65 Identity = 215/354 (60.73%), Postives = 240/354 (67.80%), Query Frame = 0
Query: 1 MPAFIPPTAPAKLLVSASRRNPLRPAVQMTVAVAAP-----VRAPKLRRPVQPSK----SPSCVSHPKQAPPPQLQQARDLLNERRYEAARSAFRSLANSDCSSEVLRSWGCLEGSHGDEQTARDLFTRAVRTASEPATEAAAWNAWALMEQRRGHISAARKCFTNGLRIDPIHAPLIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTAVSRANGEDGIAALLAAAKFEERQKQWNRARDLFREGLLRHGKQCAKILHAWGTTESHCGNFDRSRQLFLATLACPGMSGPQVXXXXXXXXXXXXXXXXXXXXXXXFKRGADANPEHVYI 345
M AFIPPTAP+KL + A R P A+++ VAAP LRRP+ P + + S HP P L+ R LL++R+Y+AAR AFR +A DC SEVLRSW LE SHGDE AR LF R+V+ AS P+ EAAAWNAWALMEQR+GHI+AARKCF NGLR+DP H PL QA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TAV+RA G+DGIAALL EGL R+G QCAKILH L+TLACPGMSG XXXXXXXXXXXXXXXXXXF RGA ANP+HVYI
Sbjct: 1 MTAFIPPTAPSKLPLRAQRAFPTCSAMRVAATVAAPSAXXXXXXXXLRRPMPPPQRRKPASSETHHPHVEPSSALRHVRALLSQRQYDAARDAFRDIAQIDCCSEVLRSWAFLEASHGDEHLARSLFIRSVKAASLPSMEAAAWNAWALMEQRKGHIAAARKCFENGLRVDPTHPPLCQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVTRAEGDDGIAALLXXXXXXXXXXXXXXXXXXXXEGLSRYGNQCAKILHXXXXXXXXXXXXXXXXXXXLSTLACPGMSGTNTAPTYQXXXXXXXXXXXXXXXXXXFARGAQANPQHVYI 354
BLAST of Ggra5719.t1 vs. uniprot
Match: R7QTR1 (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR1_CHOCR) HSP 1 Score: 122 bits (306), Expect = 8.300e-27 Identity = 85/242 (35.12%), Postives = 107/242 (44.21%), Query Frame = 0
Query: 104 LEGSHGDEQTARDLFTRAVRTASEPATEAAAWNAWALMEQRRGHISAARKCFTNGLRIDPIHAPLIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTAVSRANGEDGIAALLAAAKFEERQKQWNRARDLFREGLLRHGKQCAKILHAWGTTESHCGNFDRSRQLFLATLACPGMSGPQVXXXXXXXXXXXXXXXXXXXXXXXFKRGADANPEHVYI 345
+E HGDEQ AR+LF RA+ A P EAAAWNAWALMEQR+G+I+ ARKCF NGL++DP HAPL QA K A+S A+G+D + A+L ++GL R+G+ ++TL CPGM+G XXXXXXXXXX F RGA+ANP+H YI
Sbjct: 1 MEALHGDEQKARELFARAIHVARSPHIEAAAWNAWALMEQRKGNIATARKCFVNGLKVDPSHAPLCQAFAIFESKYGLKRRARELFSRGAQFNKTNHRTWIAWANFEANEDNFTKATLLFKAALSNADGDDCVTAILXXXXXXXXXXXXXXXXXXXQQGLTRYGQNXXXXXXXXXXXXXXXXXXXXXXXXXISTLECPGMTGVDAAPTYQAXXXXXXXXXXIGSARKLFARGAEANPKHAYI 242
BLAST of Ggra5719.t1 vs. uniprot
Match: A0A7S1ESH8 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESH8_9RHOD) HSP 1 Score: 119 bits (299), Expect = 3.600e-25 Identity = 116/236 (49.15%), Postives = 154/236 (65.25%), Query Frame = 0
Query: 66 LQQARDLLNERRYEAARSAFRSLANS-DCSSEVLRSWGCLEGSHGDEQTARDLFTRAVRTASEPATEAAAWNAWALMEQRRGHISAARKCFTNGLRIDPIHAPLIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTAVSRANGEDGIAALLAAAKFEERQKQWNRARDLFREGLLRHGKQCAKILHAWGTTESHCGNFDRSRQLFLATLAC 300
+ Q R LL+ ++ AR + LA+S + VLR WG LEG +G+ R LF+ A+++AS A EAAAW+AWA++EQR G++S ARKCF NGLR DP H P+ Q+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A+ A+ ED + A LA A+FE++ K+ + +R ++RE L +H K K LH+ E+H G++ + LF L C
Sbjct: 115 MDQVRALLHVKQVGKARDILQKLADSTNRDPRVLRMWGWLEGRNGNLALGRSLFSEAIKSASG-ADEAAAWSAWAMIEQRAGNLSGARKCFVNGLRADPAHVPIYQSFAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELNHATARSLYWSAIKAASPED-VVAKLAYAQFEQKSKKIDLSRAMYREILEQHPKN-VKALHSLANLEAHSGDYTLAENLFKKCLKC 347
BLAST of Ggra5719.t1 vs. uniprot
Match: A0A1X6P8Z8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8Z8_PORUM) HSP 1 Score: 89.4 bits (220), Expect = 3.820e-15 Identity = 47/78 (60.26%), Postives = 53/78 (67.95%), Query Frame = 0
Query: 94 SSEVLRSWGCLEGSHGDEQTARDLFTRAVRTASEPATEAAAWNAWALMEQRRGHISAARKCFTNGLRIDPIHAPLIQA 171
SS VLR+ G L + D + AR LFT AV A P +EAAAW AWALMEQR G+ + ARKCF NGLR D HAPL QA
Sbjct: 230 SSGVLRAAGWLHATVDDVEVARSLFTAAVERADSPPSEAAAWAAWALMEQRLGNTATARKCFVNGLRADVGHAPLCQA 307 The following BLAST results are available for this feature:
BLAST of Ggra5719.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5719.t1 ID=Ggra5719.t1|Name=Ggra5719.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=510bpback to top |