Ggra5702.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5702.t1
Unique NameGgra5702.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length570
Homology
BLAST of Ggra5702.t1 vs. uniprot
Match: A0A2V3IWK6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWK6_9FLOR)

HSP 1 Score: 570 bits (1468), Expect = 4.050e-196
Identity = 311/568 (54.75%), Postives = 375/568 (66.02%), Query Frame = 0
Query:   10 IRHSHSRSRNLLSLPLYPPSIVVSHRRPKPFGKLLCPLGSAFRSAFALLFCAFTFFTLDVLHATSVQSAWNVVVPISGTIPQPAATLVSDTSIAALHHAHNLS---RQYRTPQSDPLAVHT---LHNASSQPSDTSPSVESHQKHQNDPSTIAQVQQS--QSAPDAAPDEAPEQRNHTQVQQNQTEAPEXXXXXXXXXXXXXXXXXXXXXHEQSKTPPIHDKQQQQQPSFHLTVENAAREALLASQTTRDAADFSNFDQTTALNYFHLHKTGGVSFKERIWDFFSREDKIAANGKAVNILDTCHNSGPARPALGTEAEWSCDWGRMEQLSEQQRNEIDLIVGHQYWEKGAEYWVPKRDLRYFTVMRHPLHRKISFFHHFFVRNAGKKEESIALEELIPFLLGKHMPDSPLVRDAGPNYYASRLCSDGFSGYSAYTFVVAEEKAGETVFNSIRRLRQKFVFIGLQTQEKASLCMLRKSVAAFSKARGIQNMSGLDVFDQSRERMNTGSYPLTAKIVWERMSEEQRREFKQVEKVDLAIYKESVKMFHEMVRKLECRHLVEENDEDSIGM 569
            + HSHSRSRNLLSLPLYP  +V+  RR K    L CP+  +FRSA  LL  AF FF  DV+      S+WN  VP   + P P  +L    S AA    H LS   +Q   PQ  P A  +     N  S P   SP  E+  +  ++  ++   ++S  ++A +              VQQ  T +                       H Q+ TP                    A  A       RD  DFSNFD  TALNYFHLHKTGGVSFKER++DFF+ E+K+ + GK VN+LDTCH SGP RPALG EA+WSCDWG MEQLSE +R++ID+I+GHQYWEKGAEYWVP RDLRYFTVMRHPLHRKISFF+HFFVRNAGKKEES+  EELI F++GK MP+S L+RDAGPNYYASRLCSDGFSG+  + F V EEK+ + V  SI RLR+KFVFIGLQTQEKASLCMLRKSVAAFS+A GI+ + GL++ D++RERMN+GSY  T KIVWE+MSE++R EFK+VEKVDLAIY+ESVKMF EMVRK  CRHLV +N+EDSIG+
Sbjct:   14 VYHSHSRSRNLLSLPLYPSDLVLPQRRQKSHSSLACPISRSFRSAALLLLTAFAFFVFDVVQTPKTVSSWNTFVPNPSSHPHPTHSLDQQPSDAADVQPHLLSESEKQMVVPQ--PTAAPSPSEQQNQLSPPIHLSPQTEAPDESTSNSQSLLSSEESNKETAQNQXXXXXXXXNLDPDVQQQLTNS-----LPTETSSPQNAATDEENGHTQTSTPDTXXXXXXXXXXXXXXXXXEAXAATTPQPNQRDPTDFSNFDSNTALNYFHLHKTGGVSFKERLFDFFNLENKVTSLGKRVNVLDTCHMSGPDRPALGIEAQWSCDWGSMEQLSEAERDQIDVILGHQYWEKGAEYWVPNRDLRYFTVMRHPLHRKISFFYHFFVRNAGKKEESVQFEELIRFIVGKDMPESTLIRDAGPNYYASRLCSDGFSGFENHMFRVDEEKSNDMVRKSIERLRRKFVFIGLQTQEKASLCMLRKSVAAFSEAHGIEELDGLELIDKARERMNSGSYSYTGKIVWEKMSEQERNEFKRVEKVDLAIYQESVKMFDEMVRKFGCRHLVRDNEEDSIGV 574          
BLAST of Ggra5702.t1 vs. uniprot
Match: A0A2V3JBK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JBK5_9FLOR)

HSP 1 Score: 270 bits (690), Expect = 1.350e-80
Identity = 129/309 (41.75%), Postives = 198/309 (64.08%), Query Frame = 0
Query:  257 NFDQTTALNYFHLHKTGGVSFKERIWDFFSRED---KIAANGKAVNILDTCHNSGPARPALGT-EAEWSCDWGRMEQLSEQQRNEIDLIVGHQYWEKGAE-YWVPKRDLRYFTVMRHPLHRKISFFHHFFVRNAGKKEESIALEELIPFLLGKHMPDSP-LVRDAGPNYYASRLCSDGFSGYSAYTFVVAEEKAGETVFNSIRRLRQKFVFIGLQTQEKASLCMLRKSVAAFSKARGIQNMSGLDVFDQSRERMNTGSYPLTAKIVWERMSEEQRREFKQVEKVDLAIYKESVKMFHEMVRKLECRHLV 559
            NF   T LNYFH+HKTGGV+ K  +     R +   ++    + + +++TC+      P     E+ W CD+G++E  +  +   ID+++GHQYWE+G E Y+ P RD+++F++ RHPL RK+SFF+HFFVRN  + E  ++ +E+I FLLG  MP++  L RDAGPNYYASR+ SDG +G+  + +V+ + K  E + N + +L+ K+ F+GLQ Q +AS CML+K V  F+   G+  M G     +S++R+NTG YP T + +W  M+ EQR+ +++VE+VDLAIY   V+ F E ++   C H V
Sbjct:  159 NFTNNTLLNYFHMHKTGGVTTKVEVMVLIRRYENRIQMTTANRPLTVIETCYQQNYTDPEHNRLESTWHCDFGQVEGFTPHKLATIDMVMGHQYWEEGCETYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDENHVSKDEVIAFLLGDGMPENDALTRDAGPNYYASRMISDGVTGFVNHRYVIPKHKEEEAIANVLHKLQNKYAFVGLQLQPEASQCMLQKMVQVFAHVHGLDKMYGTPKLSESKKRLNTGGYPWTPRKIWGVMTAEQRQRYREVERVDLAIYDHVVQRFKEDLKAFACEHRV 467          
BLAST of Ggra5702.t1 vs. uniprot
Match: A0A2V3IXG8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG8_9FLOR)

HSP 1 Score: 244 bits (622), Expect = 1.110e-69
Identity = 131/329 (39.82%), Postives = 192/329 (58.36%), Query Frame = 0
Query:  237 NAAREALLAS----QTTRDAADFSNFDQTTALNYFHLHKTGGVSFKERIWDFFSREDKIAANGKAVNILDTCHN--SGPARPALGTEAEWSCDWGRMEQLSEQQRNEIDLIVGHQYWEKGAEYWVPKRDLRYFTVMRHPLHRKISFFHHFFVRNAGKKEESIALEELIPFLL-GKHMPDSPLVRDAGPNYYASRLCSDGFSGY---SAYTFVVAEEKAGETVFNSIRRLRQKFVFIGLQTQEKASLCMLRKSVAAFSKARGIQNMSGLDVFDQSRERMNTGSYPLTAKIVWERMSEEQRREFKQVEKVDLAIYKESVKMFHEMVRKLEC 555
            N A  A +AS    +  +  A+  NF   TA+N+ H HKTGGVSFK  +  F+   +K   NG+ V + D C++  +  A P+  +   W CDW  + ++SE +RN++D   GHQ+W  G    + KRD+R FT+MRHP  RK+SFF+HFFVR  G++EE I  EE+  FLL  K   ++ L RD GPNY A RL SDG  GY   +++ +   E      V     +L + +VF+GLQ +  A+ CML+K V  ++    + N S L++ D   E++N+GSY L AK +W   S+E+R  F + EKVDL IY+E  ++F + V+   C
Sbjct:  231 NVAPAAAIASPPLQEPEKTLAEVLNFTPATAINFMHFHKTGGVSFKTSLHKFYY--EKYKKNGEKVRVRDACYSRKNSNADPSTPSFMMWRCDWDPIREMSESERNKLDFTFGHQFWGNGVGTLLNKRDVRSFTIMRHPFDRKVSFFYHFFVREVGRREEDITFEEIRDFLLYDKLAINADLGRDLGPNYMAGRLLSDGVQGYVGNNSFRYYDVEPHRKREVAEEALKLVRDYVFVGLQVESGAAKCMLKKVVEQYNNVNDVDN-SNLELIDDGAEKLNSGSYSLGAKRIWGMFSDEERTLFDRKEKVDLLIYEEGERLFKKHVKLFGC 556          
BLAST of Ggra5702.t1 vs. uniprot
Match: R7QI20 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI20_CHOCR)

HSP 1 Score: 240 bits (612), Expect = 3.350e-68
Identity = 140/352 (39.77%), Postives = 204/352 (57.95%), Query Frame = 0
Query:  212 HEQSKTPPIHDKQQQQQPSFHLTVENAAREALLASQTTRDAADFSNFDQTTALNYFHLHKTGGVSFKERIWDFFSREDKIAANGKAVNILDTCHNSGPARPALG----TEAEWSCDWGRMEQLSEQQRNEIDLIVGHQYWEKGAEYWVPKRDLRYFTVMRHPLHRKISFFHHFFVRNAGKKEESIALEELIPFLL-GKHMPDSPLVRDAGPNYYASRLCSDG---FSGYSAYTFVVAEEKAGETVFNSIRRLRQKFVFIGLQTQEKASLCMLRKSVAAFSKARGIQNMSGLDVFDQSRERMNTGSYPLTAKIVWERMSEEQRREFKQVEKVDLAIYKESVKMFHEMVRKLEC 555
            +E++   P  D+Q+   P+  L   NA +     S+ T+   +  +F   TA+N+ H HKTGGVSFK  +  F++R  K  ++G  V   D+C+        LG    + A W CDW  + QL+ Q+RN  D + GHQ+   G +  +  RDLR FTVMRHP  RK+SF++HFFVR  G+KE  ++ EE+  FLL  K   D+ L RD GPNY A RL SDG   F+G S +++   E +  E V     ++  K+VF+GLQ +  AS CMLRK++  ++K  G+ N+ GL+  D    R+N+GSY ++A+ +W R S E R  F   EKVDLAIY+E  ++F + V+   C
Sbjct:  220 YEENNGMPNSDRQES--PAKALEATNA-KTTSQESEQTKSLEEVLHFTPKTAINFMHFHKTGGVSFKTSLHVFYNR--KFKSDGSQVVARDSCYKR---ESTLGGGEQSFAVWRCDWDPILQLNNQERNRHDFVFGHQFGLHGVDELLNLRDLRTFTVMRHPFDRKVSFYYHFFVREVGRKESEVSFEEVREFLLFDKLRIDAELGRDLGPNYMAGRLLSDGKEGFTGNSYHSYYGVEGRQVEGVVEKAVKIIGKYVFVGLQEESAASRCMLRKTMEVYNKVNGVSNV-GLEAIDGRNGRLNSGSYSMSAQAIWGRFSMEDRIVFDMKEKVDLAIYREGSRLFRKHVQVFGC 562          
The following BLAST results are available for this feature:
BLAST of Ggra5702.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IWK64.050e-19654.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3JBK51.350e-8041.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXG81.110e-6939.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI203.350e-6839.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 259..563
e-value: 1.1E-17
score: 66.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..569
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..67
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1397900..1399609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5702.t1Ggra5702.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1397900..1399609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5702.t1 ID=Ggra5702.t1|Name=Ggra5702.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=570bp
MSVATNRSAIRHSHSRSRNLLSLPLYPPSIVVSHRRPKPFGKLLCPLGSA
FRSAFALLFCAFTFFTLDVLHATSVQSAWNVVVPISGTIPQPAATLVSDT
SIAALHHAHNLSRQYRTPQSDPLAVHTLHNASSQPSDTSPSVESHQKHQN
DPSTIAQVQQSQSAPDAAPDEAPEQRNHTQVQQNQTEAPEPQQPQPAEAQ
PPQEQQQKETKHEQSKTPPIHDKQQQQQPSFHLTVENAAREALLASQTTR
DAADFSNFDQTTALNYFHLHKTGGVSFKERIWDFFSREDKIAANGKAVNI
LDTCHNSGPARPALGTEAEWSCDWGRMEQLSEQQRNEIDLIVGHQYWEKG
AEYWVPKRDLRYFTVMRHPLHRKISFFHHFFVRNAGKKEESIALEELIPF
LLGKHMPDSPLVRDAGPNYYASRLCSDGFSGYSAYTFVVAEEKAGETVFN
SIRRLRQKFVFIGLQTQEKASLCMLRKSVAAFSKARGIQNMSGLDVFDQS
RERMNTGSYPLTAKIVWERMSEEQRREFKQVEKVDLAIYKESVKMFHEMV
RKLECRHLVEENDEDSIGM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase