Ggra5687.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5687.t1
Unique NameGgra5687.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length956
Homology
BLAST of Ggra5687.t1 vs. uniprot
Match: A0A2V3IXG3 (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG3_9FLOR)

HSP 1 Score: 543 bits (1398), Expect = 7.430e-176
Identity = 397/965 (41.14%), Postives = 506/965 (52.44%), Query Frame = 0
Query:   16 VSCLLGLSTSAKVEWKINLGGEPTDGFQAEEAVLNVDENLAKMRYHGLIKGTGTDLNVFKTQRFSRAEDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVINGYSYSNAYMEDLPTVPAGPFEGGDFASLDIIGPRPPADSSLLYDPSLNPKFKASNKPLPLGNSPSQAFTTTAQDASASPSSESS---------GPPALPNPFGTSQSAQSMPSTSDTNAGSVGGPDLSSQYSNTGYGAFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSFGAPQGAMQYRSFRRR-LASYYGEGTPVNFPFAPSGDVGHNEAIREQAAGNQAYADQLERVGEVSNQV------DQPVAVNDLSKMSISLQDTVSQTPGSGDVXXXXXXXXXXXXGEHGSIGALPPPAIEDGMPPSLLDESSRTPAS-LELPREQEQAPAPREALSQMLPSSELQTSVNINNAHEDIATTFKSAEGFPSEKTSVPNGEGIGSFQERALPETGGGQYVSSISRGVPNVALAEQVQDGREFRSGVSDLQRSSNIRSQRGMRAETLASDER----QSRSPTDFMNGIRSQIQSLIRHTKSSDRIPEGPDDYSGVRRDTITSSPGLHPQ-ETKRTFTPVERVSSRIGVSSPVDERRGLNLDGRDRGTENFLPSNSFNDRSSQLNSLQGMRSPPRRYAAGFEQRRDHLK-FNEADLGAEYSTRFASVGSIDQRSSRQLRAPRSLNGISARQAEEEVPGLPGVSGSPSGS-EDPSGVSEVPPSAGVHIGNGRLDGICIDNSTHCSCGMVNEE-PKNCLYVAKEDAESMLCVRRPCNGKLICACAPGASSLCERSVVKDILVPATVHKHGETEEAEVVACRRENLEHGIHVLTPVV 955
            V CL  L +S ++EWKINLGG+  DGFQAEEAVLNVDE  AKMRYHG IKG+G DLNVFKTQRFSRAEDLVL+FPVPDGVY+VTLMF+ETWKGAYGSGNRVFDVYLGSKP G+V+VI+ MDPFRSGGPAG VRRKF+ IAT+GGLTLALRPIKQNPQIAGI+I+GYSY  +YMEDLPTVPAGP E  DF+ ++ +GP  P +++L+YDPSLNPKF++S+       S ++ FT +  +   S  S                  N FG +  AQ  P+   T+ G+ G P  SS  +   YGA                                                             S    AP G   + +FRRR LASY GE  PV  P   S    +N+        N A  DQ   +G  SN+V      DQP+A +     S   Q      P S                        P   I++G P S    +S   AS L    + +  P     + Q  P S++  S         + T+  S +     +T       +GS   RA P++  G   +++    P   +  Q +    F + +  L+ +S      G+RA + +  E     + RSPT+ MNGIR+Q+ SLI+ TK+  R     ++   +R DT  S   L  + + K  F    R S+  G  SP + +   N   R+R +     S+ + D +S + S  G RS     ++G  Q     + +  A   A + +    +G  D R  R  R   S N I  RQ  + V     +   P G  E    V E P SAGVHIG+  LDGICI+NSTHCSCGMV +  P+ CLYV KED   MLCVRRPC+GKL+CACAPGASSLC RS V +ILV A  HKHGETEE+E+V C RE LEHGI VLTPVV
Sbjct:   19 VCCLSVLCSSERIEWKINLGGDAVDGFQAEEAVLNVDEKFAKMRYHGTIKGSGADLNVFKTQRFSRAEDLVLNFPVPDGVYSVTLMFSETWKGAYGSGNRVFDVYLGSKPNGVVRVIEAMDPFRSGGPAGSVRRKFNDIATRGGLTLALRPIKQNPQIAGIIISGYSYGKSYMEDLPTVPAGPSEVEDFSLVNNMGPNLPQEANLIYDPSLNPKFRSSSTSSTPSGSSTKTFTMSTNNNVPSTGSSVGQXXXXXXXXXASRASNAFGAA--AQYSPNVQATSFGTQGFP--SSFSAGNPYGAV--------------------------------------------RRASLTSPPSQVGITRSDGGVAPNGGTSFGTFRRRRLASYAGEEAPVALPLTGSVRESNNQLSSGVGTTNLAIGDQNGGLGS-SNEVRSYHSTDQPMAYSQQPPSSSFSQGNGFIAPNS-------------------PADLSPSGGIDNGPPTSFASRNSLEEASNLATGGQHQLLPQSEGTVQQQTPPSQMMESSIGRQEEAPVVTSLDSTQ----LQTLT-----LGSENRRAQPDSQIGTD-AAVKNEEPTSNMYHQTRPN--FTTRLGGLKPTSFKLDSEGIRAPSSSYSEENVENRKRSPTEVMNGIRAQLHSLIQQTKAISR-----NENESIRDDTTISERQLSREGQHKLGFKSFSRDSADQG--SPAEAQVIQNYP-RERPS---TLSDRYEDSTSHVAS--GSRSE---VSSGMSQPHPQSEMYGSATRDALHQSSEREIGK-DHRHFRGFR--NSKNDIDRRQTGKSVRPFSDLPDLPPGIIEGSEVVPEAPVSAGVHIGSENLDGICINNSTHCSCGMVTDSNPEECLYVVKEDVSPMLCVRRPCSGKLVCACAPGASSLCMRSTVMEILVRAAAHKHGETEESEIVQCSREKLEHGIGVLTPVV 884          
BLAST of Ggra5687.t1 vs. uniprot
Match: A0A1X6P2F9 (Malectin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2F9_PORUM)

HSP 1 Score: 199 bits (507), Expect = 2.610e-49
Identity = 116/239 (48.54%), Postives = 149/239 (62.34%), Query Frame = 0
Query:    6 SVCVVSFLVFVSCLLGLSTSAKVEWKINLGGEPTDG-FQAE-EAVLNVDENLAKMRYHGLIKGTGTDLNVFKTQRFSRAEDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSG-GPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVINGYSYSNAYMEDLPTVPAGPFEGGDFASLDIIGPRPPADSSLLYDPSLNPKFKASNKPLPLGN 241
            ++CV + +   + L   +   +V+ K+N+GG P  G F +E EA+   D + AKMR H   K TG    V +TQRFSR EDL LHFPV DGVYTVTL+FAETW GA  SG RVFDV+LGSK  G+ KV+   D +R   G    ++R F  I T+ GLT+ LRPI+QNPQI GI+I+G+SYS+  M  LP  PA P +  DF S+  +   PP D +LLYDP+ NPKF       P  N
Sbjct:    5 ALCVAAAVSLAALLTAPADGRRVDLKVNMGGGPVSGGFVSEIEAIDLTDTSFAKMRDHSG-KLTGPYAEVLQTQRFSREEDLFLHFPVDDGVYTVTLLFAETWDGACESGKRVFDVFLGSKTFGVQKVLGNFDIYRHAKGCHVALKRSFPHIITKDGLTVVLRPIRQNPQIGGIIISGHSYSDTLMNSLPLAPALPNDRPDFNSMRAMLQVPPVDPALLYDPATNPKFNVKGAKPPPAN 242          
BLAST of Ggra5687.t1 vs. uniprot
Match: A0A1X6P0P9 (Malectin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0P9_PORUM)

HSP 1 Score: 125 bits (315), Expect = 2.940e-27
Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   27 KVEWKINLGGEPTDGFQAEEAVLNVDENLAKMRYHGLIKGTGTDLNVFKTQRFSRAEDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVINGY 181
            K  +K+NLGG+ +  F AE +V+++ E+  ++R          + +VF+TQRF R+E+++   PVPDGVY+VTL+FAETW+GA   G RVFDV LG+   G+   +   D FR  G      ++F  + +  G+ + L+P+ QNPQIAG ++ G+
Sbjct:   47 KTFFKVNLGGDASGDFLAESSVIDM-EDFPRLRTMTAPIAKTDNPDVFRTQRFGRSENVMFRIPVPDGVYSVTLLFAETWEGACRVGGRVFDVLLGTPQTGLKLAVQNFDIFREAGGFTAFGKRFDAVPSAEGILVVLQPVVQNPQIAGFIVEGF 200          
BLAST of Ggra5687.t1 vs. uniprot
Match: R7QSB1 (Malectin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSB1_CHOCR)

HSP 1 Score: 124 bits (311), Expect = 6.870e-27
Identity = 66/169 (39.05%), Postives = 103/169 (60.95%), Query Frame = 0
Query:   13 LVFVSCLLGLSTSAKVEWKINLGGEPTDGFQAEEAVLNVDENLAKMRYHGLIKGTGTDLNVFKTQRFSRAEDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVINGY 181
            LV    LL L+ S K+  K+NL G P   F  E+ VL++    +K      I+ T     VF++QRF+R+ DL L  PVPDG+Y+VTL+FAET++ A  +G RVFD+ LG+   G+ KV+D+ D F++ G      ++F G+ ++ G+ + L  + Q+P +AG +I G+
Sbjct:   66 LVLFLSLLTLTASQKISLKVNLAGGPVGDFLGEDQVLDMT-GFSKNVVRDPIQNTDQP-EVFQSQRFARSSDLTLRLPVPDGIYSVTLLFAETFRRACVAGARVFDISLGTPVSGVTKVVDKFDLFQTAGCQAAHGKRFDGVPSKDGIVVHLSQVAQHPSLAGFIIEGF 232          
BLAST of Ggra5687.t1 vs. uniprot
Match: A0A2V3J379 (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J379_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 9.890e-24
Identity = 62/169 (36.69%), Postives = 97/169 (57.40%), Query Frame = 0
Query:   13 LVFVSCLLGLSTSAKVEWKINLGGEPTDGFQAEEAVLNVDENLAKMRYHGLIKGTGTDLNVFKTQRFSRAEDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVINGY 181
            L  VS     + + K+  K+NLGG P + F  EE ++++ E  AK      I  T     VF++QRFSR  D  +  PVPDG+Y+VTL+F+ET++ A   G RVFDV LG+   G+ +VI+  D F++ G A    +KF  + ++ G+ + L    Q+P + G ++ G+
Sbjct:   11 LAIVSSGFAQTGNKKIVLKVNLGGGPVNDFIGEEQLMDM-EAFAKNVARVPIANTDQQ-QVFQSQRFSREGDFTMRVPVPDGIYSVTLLFSETYQKACAPGGRVFDVSLGTPVSGVSRVIENFDVFQAAGCASAYGQKFDKVPSKEGIVVHLTRKAQHPALCGFIVEGF 177          
BLAST of Ggra5687.t1 vs. uniprot
Match: A0A5J4YIW7 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIW7_PORPP)

HSP 1 Score: 84.0 bits (206), Expect = 5.330e-13
Identity = 57/165 (34.55%), Postives = 83/165 (50.30%), Query Frame = 0
Query:   32 INLGGEPTDGFQAEEAVLNVDENLAKMRYHGLIKGTGTDL-------NVFKTQRFSRA-EDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAG--PVRRKFSGIATQGGLTLALRPIKQNPQIAGIVINGYSYSNA 186
            INLGG    G+ AE   L   + +  +R    + G   +L       +V + Q  S++ E L L  PV  GVYTV L+FAE W GA+  G RVFD+ +G+   G   V    D + + G  G   V +    +AT+GG+ + L+P KQNP +  +V+ G     A
Sbjct:   56 INLGGGTVGGYMAEPKDLYKADTVPYLRKFS-VSGEKAELISPPELRDVLRNQMSSKSNEGLSLRIPVEAGVYTVHLVFAELWDGAFTPGARVFDIRVGTYMCGEQLVAKDFDVYSAAGNRGYTGVVQTIEKVATRGGINIRLKPKKQNPILNAVVVEGVKMDTA 219          
BLAST of Ggra5687.t1 vs. uniprot
Match: A0A842IJT8 (Putative Ig domain-containing protein n=1 Tax=Robiginitalea sp. SC105 TaxID=2762332 RepID=A0A842IJT8_9FLAO)

HSP 1 Score: 62.4 bits (150), Expect = 5.280e-6
Identity = 44/130 (33.85%), Postives = 60/130 (46.15%), Query Frame = 0
Query:   52 DENLAKMRYHGLIKGTGTDLNVFKTQRFSRA---EDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVI 178
            DE        G    TG    +F T+R++     +++   FPVP+G YTV L+FAE W GA  +G RVFDV +         V+D +D   + G        F+   T G L +      QNP I GI I
Sbjct: 1323 DETFGAAVTTGFTNTTGYPDALFTTERYNTLAVPDNMQWDFPVPNGNYTVNLLFAEIWTGAQTAGVRVFDVEIEGN-----LVLDDLDQTAAYGWETAAVETFAVTVTDGNLDIDFIQGIQNPSIKGIEI 1447          
BLAST of Ggra5687.t1 vs. uniprot
Match: A4CK29 (Ring canal kelch-like protein n=2 Tax=Robiginitalea TaxID=252306 RepID=A4CK29_ROBBH)

HSP 1 Score: 62.0 bits (149), Expect = 6.980e-6
Identity = 42/120 (35.00%), Postives = 57/120 (47.50%), Query Frame = 0
Query:   62 GLIKGTGTDLNVFKTQRFSRA---EDLVLHFPVPDGVYTVTLMFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRKFSGIATQGGLTLALRPIKQNPQIAGIVI 178
            G    TG    +F+T+R++     +++   FPVP+G YTV L+FAE W GA   G RVFDV +   P     V+   D   + G A      F    + G L +      QNP I GI I
Sbjct: 1307 GFTNTTGYPDAIFQTERYNTLAVPDNMQWDFPVPNGDYTVNLLFAEIWTGAQDPGIRVFDVQIEGNP-----VLTNFDQTAAYGWATAGVESFPVTVSDGNLDIDFIMGVQNPSIKGIEI 1421          
The following BLAST results are available for this feature:
BLAST of Ggra5687.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IXG37.430e-17641.14Malectin domain-containing protein n=1 Tax=Gracila... [more]
A0A1X6P2F92.610e-4948.54Malectin domain-containing protein n=1 Tax=Porphyr... [more]
A0A1X6P0P92.940e-2740.00Malectin domain-containing protein n=1 Tax=Porphyr... [more]
R7QSB16.870e-2739.05Malectin domain-containing protein n=1 Tax=Chondru... [more]
A0A2V3J3799.890e-2436.69Malectin domain-containing protein n=1 Tax=Gracila... [more]
A0A5J4YIW75.330e-1334.55Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A842IJT85.280e-633.85Putative Ig domain-containing protein n=1 Tax=Robi... [more]
A4CK296.980e-635.00Ring canal kelch-like protein n=2 Tax=Robiginitale... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.430coord: 26..181
e-value: 9.9E-19
score: 69.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..680
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 665..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 682..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..842
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 714..761
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..955
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR021720Malectin domainPFAMPF11721Malectincoord: 57..165
e-value: 3.0E-12
score: 47.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1358693..1361871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5687.t1Ggra5687.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1358693..1361871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5687.t1 ID=Ggra5687.t1|Name=Ggra5687.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=956bp
MAGLNSVCVVSFLVFVSCLLGLSTSAKVEWKINLGGEPTDGFQAEEAVLN
VDENLAKMRYHGLIKGTGTDLNVFKTQRFSRAEDLVLHFPVPDGVYTVTL
MFAETWKGAYGSGNRVFDVYLGSKPGGIVKVIDQMDPFRSGGPAGPVRRK
FSGIATQGGLTLALRPIKQNPQIAGIVINGYSYSNAYMEDLPTVPAGPFE
GGDFASLDIIGPRPPADSSLLYDPSLNPKFKASNKPLPLGNSPSQAFTTT
AQDASASPSSESSGPPALPNPFGTSQSAQSMPSTSDTNAGSVGGPDLSSQ
YSNTGYGAFGSTGTGAVGGTGIGAVGSPGTGAVAGAGTGVVGGTGTGAPS
VLQSGQPQTVGAPAPVAVGSTSFGAPQGAMQYRSFRRRLASYYGEGTPVN
FPFAPSGDVGHNEAIREQAAGNQAYADQLERVGEVSNQVDQPVAVNDLSK
MSISLQDTVSQTPGSGDVQDTVHQTLGSGDGEHGSIGALPPPAIEDGMPP
SLLDESSRTPASLELPREQEQAPAPREALSQMLPSSELQTSVNINNAHED
IATTFKSAEGFPSEKTSVPNGEGIGSFQERALPETGGGQYVSSISRGVPN
VALAEQVQDGREFRSGVSDLQRSSNIRSQRGMRAETLASDERQSRSPTDF
MNGIRSQIQSLIRHTKSSDRIPEGPDDYSGVRRDTITSSPGLHPQETKRT
FTPVERVSSRIGVSSPVDERRGLNLDGRDRGTENFLPSNSFNDRSSQLNS
LQGMRSPPRRYAAGFEQRRDHLKFNEADLGAEYSTRFASVGSIDQRSSRQ
LRAPRSLNGISARQAEEEVPGLPGVSGSPSGSEDPSGVSEVPPSAGVHIG
NGRLDGICIDNSTHCSCGMVNEEPKNCLYVAKEDAESMLCVRRPCNGKLI
CACAPGASSLCERSVVKDILVPATVHKHGETEEAEVVACRRENLEHGIHV
LTPVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom