Ggra5681.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A2V3IX62 (Transcription elongation factor SPT4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX62_9FLOR) HSP 1 Score: 224 bits (571), Expect = 6.920e-74 Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 0
Query: 1 MAQASGAHVVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEENRIRMHSVLATTDKP 123
M+ G+HVVPTEV QS+LKACMSCSLIKTTQQFYTDGCDNC FMSL GDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYA+HIDAR+PDDIVEQLEEN IR++SV+ATT+KP
Sbjct: 1 MSNNDGSHVVPTEVAQSKLKACMSCSLIKTTQQFYTDGCDNCDFMSLAGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAVHIDARLPDDIVEQLEENGIRVYSVVATTEKP 123
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A7S0BQA9 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQA9_9RHOD) HSP 1 Score: 127 bits (320), Expect = 1.880e-35 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEENRIRMHSVLATTD 121
+VPT+ + S+L+ C+SCSL+KT QF T+GC+NCPF+++ GDKERI CT++ +G Y MNP SWVA+WQR PG YAI IDA +P+ I E+L E IR+ AT +
Sbjct: 24 MVPTDWS-SKLRGCLSCSLVKTVNQFATNGCENCPFLNMQGDKERIMDCTSNSILGIYTTMNPRTSWVARWQRTVKLRPGCYAIAIDATLPEGIEEELSEQGIRVKRTRATAE 135
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A7S1TIX5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIX5_9RHOD) HSP 1 Score: 125 bits (314), Expect = 8.210e-35 Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 11 PTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEENRIRMHSVLATT 120
PTE + ++L+ACM+CSL+K+ QF GC+NCPF+ L D+ERI CTT F G + VM P +SWVAKWQR+ G YA+ ++ +P+DI+E++ EN + H V AT+
Sbjct: 9 PTETSLNKLRACMNCSLVKSAHQFSIRGCENCPFLGLENDRERIQLCTTPNFSGLFSVMRPLESWVAKWQRIVKLRSGCYALSVEGELPEDIIEEMLENGGKAHRVRATS 118
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A7S0ZLH4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLH4_9RHOD) HSP 1 Score: 124 bits (312), Expect = 1.810e-34 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEENRIRMHSVLAT 119
+VP E ++L+AC+SCSL+KT +QFY GCDNCP + L D E I+ CT++ F GTYV++ P SWV+KWQR F PG YAI ID ++P E+L EN R++ + AT
Sbjct: 8 IVPQEFGMNKLRACLSCSLVKTQKQFYDQGCDNCPGLMLQRDSEAIAVCTSNAFSGTYVLLRPKDSWVSKWQRTRRFRPGCYAIQIDIQLPQSEEERLVENGQRVNRIRAT 118
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A5J4YSZ5 (Transcription elongation factor SPT4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSZ5_PORPP) HSP 1 Score: 121 bits (304), Expect = 3.150e-33 Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCP-FMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEENRIRMHSVLAT 119
VVP E +++L+AC+SCSL+KT QF+ DGCDNC F ++ GD+ER+ TT F+G Y +MNP +SWV+K+Q V +FVPG YAI +DA +P + E EN R+ + AT
Sbjct: 10 VVPLEFNRTKLRACLSCSLVKTATQFFRDGCDNCERFAAMKGDEERVEEATTPAFLGVYALMNPKESWVSKYQNVRTFVPGCYAISMDAELPAYLEEVYRENGGRVKQIRAT 121
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A1X6P9H5 (Spt4 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9H5_PORUM) HSP 1 Score: 122 bits (305), Expect = 4.620e-33 Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 0
Query: 8 HVVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVA-SFVPGAYAIHIDARMPDDIVEQLEENRIRMHSVLAT 119
V+PTE S+L+AC+SCSLIKT +QF DGCDNC F+ + ++R+ CT+ FVG V NP SWV +WQR+ + V G YAI +DA++P+DI E LE+N R+ AT
Sbjct: 32 RVIPTEFLPSKLRACLSCSLIKTAEQFLLDGCDNCDFLDMANSRDRVGQCTSGAFVGVAGVANPADSWVGRWQRLGRNAVAGCYAIGVDAKLPEDIRESLEDNGYRVARTRAT 144
BLAST of Ggra5681.t1 vs. uniprot
Match: M1V579 (Spt4 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V579_CYAM1) HSP 1 Score: 112 bits (280), Expect = 1.160e-29 Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCP--FMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEENRIRMHS 115
VVP+EV S+L+AC+SC L+K+ QF GC+NCP F + GD+ER+ TT++F G + P SWVAKWQR++ VPG YAI I A +PDD++E+LE R + S
Sbjct: 10 VVPSEVQSSKLRACLSCGLVKSVAQFLAYGCENCPGLFEAGTGDRERVLTFTTAEFSGLVALYRPKVSWVAKWQRLSRKVPGCYAIGILAELPDDVLEELEALRFDVES 118
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A7J7IN23 (Transcription elongation factor SPT4 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IN23_9RHOD) HSP 1 Score: 109 bits (272), Expect = 1.900e-28 Identity = 47/101 (46.53%), Postives = 72/101 (71.29%), Query Frame = 0
Query: 9 VVPTEVTQSRLKACMSCSLIKTTQQFYTDGCDNCPFM--SLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLE 107
VVP+E+ S+L+AC+SC L+K+ QF GC+NCP + + GD+ER+ TT++F G + P +SWVA+WQR++ VPG YA+ I A +PDD++E+L+
Sbjct: 10 VVPSEIQSSKLRACLSCGLVKSVAQFLAYGCENCPGLIEAGTGDRERVLTFTTTEFSGITALYKPKRSWVARWQRLSQLVPGCYAVGIHANVPDDVLEELD 110
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A7S3LYU5 (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYU5_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.250e-28 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 19 LKACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLE 107
L+AC+ CSLIKT +QF GC+NC F+ L G+K RI CTTS F G ++ P SWVAKWQR+A + PG YAI + +PDD++E E
Sbjct: 19 LRACLRCSLIKTFEQFNDKGCENCEFIDLEGNKGRIEECTTSYFEGAIALVEPQGSWVAKWQRIAQYQPGLYAIEMIGELPDDVIEHCE 107
BLAST of Ggra5681.t1 vs. uniprot
Match: A0A1Y2XBR0 (Transcription elongation factor SPT4 n=1 Tax=Daldinia sp. EC12 TaxID=1001832 RepID=A0A1Y2XBR0_9PEZI) HSP 1 Score: 106 bits (265), Expect = 1.590e-27 Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0
Query: 20 KACMSCSLIKTTQQFYTDGCDNCPFMSLNGDKERISACTTSQFVGTYVVMNPTKSWVAKWQRVASFVPGAYAIHIDARMPDDIVEQLEE 108
+ACM CS+I T F +GC NCPF+ L G E I ACT+SQF GT P +SWVA+WQRV +FVPG YAI ++ +P+DI +E+
Sbjct: 12 RACMVCSIIMTQAHFRAEGCPNCPFLDLKGSPEAIEACTSSQFEGTMACFQPRRSWVARWQRVDTFVPGTYAIKVNGSLPEDIKVAMED 100 The following BLAST results are available for this feature:
BLAST of Ggra5681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5681.t1 ID=Ggra5681.t1|Name=Ggra5681.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bpback to top |