Ggra5672.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5672.t1
Unique NameGgra5672.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length489
Homology
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A2V3IX97 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX97_9FLOR)

HSP 1 Score: 270 bits (691), Expect = 7.960e-86
Identity = 133/178 (74.72%), Postives = 151/178 (84.83%), Query Frame = 0
Query:  311 MAAFLSSPNCIGWKFTNTLSRAKTSRVTPSYHVSRKTVRCKLAVNKITNKSFQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPTPEKVSATWKYSDSDGELLVDIERFYEEGSIKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYQHPADFSPNSEVGWFNMILATDDLPSDDFDISVQ 488
            MAAF+++ +    +       A T +   +Y  +R+TV+C LAV+KI NKSFQLEEDEDAVSTTSA+YL+ DGTLSIGKTDGP PEKV ATW YSD+DGELLV+IER+YEEG+ KFSVKRVLRGHLDDSRKNLVDLPVFSGGMY+HPADFSPNSEVGWFNMILATDDLPSDDFDIS Q
Sbjct:    1 MAAFINATHFAVVRPVRLFGNAATLQAPKAYKTNRRTVKCMLAVDKIANKSFQLEEDEDAVSTTSAIYLAEDGTLSIGKTDGPVPEKVDATWNYSDTDGELLVEIERYYEEGNTKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYRHPADFSPNSEVGWFNMILATDDLPSDDFDISAQ 178          
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A2V3IXC2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXC2_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 3.090e-37
Identity = 112/249 (44.98%), Postives = 159/249 (63.86%), Query Frame = 0
Query:    6 DKEKFGSLPRFKIASTPNSDNNGTRRKKKISRVLSKVRFRELETCSEDENEARHTQSEGNASTPGWRGGVPRSPRSTHTGNSQDGQNAMNPSKLGESRKKQ-GSDDRVRSEALPKRHSKYSPGRRASGRISLGLLPPTLQSVREMSYSTRNTREADLRHDRR-KSWDIMRSHSERFGKEPNKQSIRDESKVRSWGNRKGEETSDGDKSPKCERGSIEAIFRSTSTFSNSEGDSISLKGFFQNLIALENE 252
            DKE F S       ++P     G R +K+++R+LSKVRFR+++T SEDEN+   T +   + +P  +G   RS  S+    S  G   M+ S   +SRKKQ G+D+RVRS    K+  ++   R +S R+SLGLLPPTLQSVREMS ++++ R ++  +DR+ +S ++ RS SER+   P   ++ DE KVR    RK  +  + D S K ++GSIE IFRS+S FSNSE D+IS+KGF Q+LIALENE
Sbjct:    7 DKEGFLSPTGVSHHASP----CGNRSRKRLTRILSKVRFRDVDTSSEDENDNLSTWTGSKSLSPVGKGSTLRSGGSS---GSLSGLFLMS-SPTSDSRKKQSGADNRVRSPQS-KQRCRHLRRRISSRRMSLGLLPPTLQSVREMSSASKSGRNSEYVYDRKNRSQEVKRSCSERYAL-PGLGNVMDEPKVRCSEKRKASKNLEEDWSSKPQKGSIEEIFRSSSNFSNSEADTISMKGFVQSLIALENE 245          
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A1X6NJ50 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ50_PORUM)

HSP 1 Score: 92.4 bits (228), Expect = 5.870e-18
Identity = 62/201 (30.85%), Postives = 97/201 (48.26%), Query Frame = 0
Query:  313 AFLSSPNCIGWKFTNT-LSRAKTSRVTPSYHVSRKTVRCKLAVNK-------------------------ITNKSFQLEEDEDAVSTTSAVYLSSDGT-LSIGKTDGPTPEKVSATWKYSDSDGELLVDIERFYEEGSIKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYQHPADFSPNSEVGWFNMILATDDLPSDDFDIS 486
            AF+ +P C+  +      +R  T R  P+ H +R + R  ++ N                          + N+SFQL E ED+    SA+YL +D   +  G TDGP P+ V+  W   D DG L + + R YE G   F V R  +GH    R+    L    G ++      +P + VG+F++++ATDDLPS+D+D++
Sbjct:    2 AFVGTPLCVRVRGAPPPTARTMTRRPVPAGHPTRASSRMSISENTSAAGATPTVGPPAAVVTSASVSDEDVGNRSFQLIEMEDSEQAVSALYLRADDHGVDFGATDGPVPDSVTGEWVLHDDDGTLGLSLTRKYE-GDFSFEVTRFYKGHYQ--RREGSSLVTVEGYIFMPEVLMNPENAVGFFSLVMATDDLPSEDYDVT 199          
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A7S2H0E8 (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0E8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.270e-9
Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 0
Query:  360 KSFQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPTPEKVSATWKYSDSDGELLVDIERFYEEGS------------IKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYQHPADFSPNSEVGWFNMILATDDLPS 480
            K++QLEE EDA ++T+ VYL+ D T++ G TDGP  +  S TW+ +    +  + I R Y  G+             KF V R   G +      + +    +G M      +    EVG+FNMI  TD++ S
Sbjct:   88 KTYQLEEMEDAETSTTKVYLNQDRTITFGDTDGPIADSASGTWEVNPGTNDFTMKIRRRYSTGTPASKESKTDIGEFKFDVLREYSGEMT----MVGECVGITGVMTDGDDSWGEKKEVGFFNMIDGTDEMAS 216          
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A7S0ZDP4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDP4_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 5.570e-9
Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 0
Query:  362 FQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPTPEKVSATWKYSDSDGELLVDIERFYE-EGSIKFSVKRVLRG 434
            FQL+E ED   T +AV L+SDGT+++GKTDGP P KV  +WK  + D + +++++R +E E  ++++V+R   G
Sbjct:   83 FQLDEMEDECETCTAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGD-QFILEVDRVFEGEKGVEYTVQREYAG 155          
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A7S0ZDN7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDN7_9RHOD)

HSP 1 Score: 57.0 bits (136), Expect = 1.370e-6
Identity = 27/65 (41.54%), Postives = 46/65 (70.77%), Query Frame = 0
Query:  371 VSTTSAVYLSSDGTLSIGKTDGPTPEKVSATWKYSDSDGELLVDIERFYE-EGSIKFSVKRVLRG 434
            V T +AV L+SDGT+++GKTDGP P KV  +WK  + D + +++++R +E E  ++++V+R   G
Sbjct:    5 VQTCTAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGD-QFILEVDRVFEGEKGVEYTVQREYAG 68          
BLAST of Ggra5672.t1 vs. uniprot
Match: A0A1Z5JI82 (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI82_FISSO)

HSP 1 Score: 57.4 bits (137), Expect = 4.230e-6
Identity = 38/125 (30.40%), Postives = 63/125 (50.40%), Query Frame = 0
Query:  358 TNKSFQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPTPEKVSATWKYSDSDGELLVDIERFY----------EEGSIKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYQHPADFSPNSEVGWFNMI 472
            T   + LEE ED  + T+ ++L SD +L +GKTDGP     + +W   ++DG   + ++R+Y          + G  +F V+R+  G +      +  +   SG M  H  D   + EVG+FN+I
Sbjct:   44 TEHYYNLEELEDKETCTTEIFLRSDKSLQVGKTDGPLYVNAAGSWS-QEADGTFRMTLKRWYNAGRTPASKTDMGEFQFEVERLFVGEV----ATVGGIAAVSGSM--HHIDGDIDREVGFFNLI 161          
The following BLAST results are available for this feature:
BLAST of Ggra5672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IX977.960e-8674.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXC23.090e-3744.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NJ505.870e-1830.85Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2H0E82.270e-932.33Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0ZDP45.570e-943.24Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ZDN71.370e-641.54Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1Z5JI824.230e-630.40Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1312955..1315324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5672.t1Ggra5672.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1312955..1315324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5672.t1 ID=Ggra5672.t1|Name=Ggra5672.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=489bp
MSNIKDKEKFGSLPRFKIASTPNSDNNGTRRKKKISRVLSKVRFRELETC
SEDENEARHTQSEGNASTPGWRGGVPRSPRSTHTGNSQDGQNAMNPSKLG
ESRKKQGSDDRVRSEALPKRHSKYSPGRRASGRISLGLLPPTLQSVREMS
YSTRNTREADLRHDRRKSWDIMRSHSERFGKEPNKQSIRDESKVRSWGNR
KGEETSDGDKSPKCERGSIEAIFRSTSTFSNSEGDSISLKGFFQNLIALE
NETLDFPYFVHKHLFQQQFEPVFLSRNSLALFIAHTSTQTIHRQRRKGVN
QVEKLVRRFPMAAFLSSPNCIGWKFTNTLSRAKTSRVTPSYHVSRKTVRC
KLAVNKITNKSFQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPTPEKVSA
TWKYSDSDGELLVDIERFYEEGSIKFSVKRVLRGHLDDSRKNLVDLPVFS
GGMYQHPADFSPNSEVGWFNMILATDDLPSDDFDISVQ*
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