Ggra5667.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5667.t1
Unique NameGgra5667.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
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BLAST of Ggra5667.t1 vs. uniprot
Match: A0A2V3IU92 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU92_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 3.890e-95
Identity = 171/343 (49.85%), Postives = 229/343 (66.76%), Query Frame = 0 
Query:    3 TSETFRKLPTEWLDVNDKRTGQENTI-ETPGFRPFVRRERTFDLDTIIVAESKDSSPHSDIRKEKVPTQRSQTRQNKSLAKLCFPRASMTESESQEATHKAAGDGHCASRQWFSKLTYLDIGTSRYIGDFTLLFLRVTLLFILALSGGMAFGHRSQIDLASLQSQLFVWLHCWFFVLYPILLWSSLLTLRTLNSDAVEPR-RLWTFASAVFHVLVTLAQVELFRLILFNLAPQLRP-SNGTDAFYSLSSSFAGQRYIMFIASLIEFYFSTVPYFVEYLLATILISAVWETGCIFIRDMEHAWIKIVLSIALFSLASILASINFLIANKLPGRKAKIPGRDPPP 342
            ++ETFRKLPTEWLDVND +  QE+TI E P FR   +RE T DL+TI V ESK++S  S    + VPT       NK+     F    M + E+ E   K   D     R WF +LTY  IGT RY+G+  LLF+R+  LF+ A+S G+ +GHR Q+D+  L+S+LF WL   F +LYP+LLW+SLLT R+LNS+   P+ RLWTF + VFH LVT +QVELFRL LF+  P+L+P S+ T   YSL S FA QRY+MF   LIEFY S VPY+ EYLL T+L++ VWE G +F R+++   ++I++SIAL +L  ILAS+N+LIA+K   R++++  R P P
Sbjct:    2 SNETFRKLPTEWLDVNDNKQVQESTINEFPEFRATSKRELTVDLETISVEESKENS--STPEGQGVPTDSQNPASNKATRTSFFSLKRMLKQEANENGGKTDMDCSSKERLWFERLTYRQIGTGRYLGNVGLLFVRIFFLFMHAISAGIMYGHRRQVDMLLLRSELFAWLQFVFVLLYPLLLWASLLTSRSLNSEDDAPKQRLWTFVAVVFHTLVTFSQVELFRLFLFHFVPRLQPKSSSTAILYSLDSVFARQRYLMFATVLIEFYCSQVPYYPEYLLVTVLLAGVWEIGTLFTRNLDPFSVRIIISIALLALVCILASLNYLIADKF--RRSQVNSRQPQP 340
The following BLAST results are available for this feature:
BLAST of Ggra5667.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IU923.890e-9549.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..222
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 325..346
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..267
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 268..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 296..300
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availableTMHMMTMhelixcoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
NoneNo IPR availableTMHMMTMhelixcoord: 250..267
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 272..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1299320..1300360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5667.t1Ggra5667.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1299320..1300360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5667.t1 ID=Ggra5667.t1|Name=Ggra5667.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MSTSETFRKLPTEWLDVNDKRTGQENTIETPGFRPFVRRERTFDLDTIIV
AESKDSSPHSDIRKEKVPTQRSQTRQNKSLAKLCFPRASMTESESQEATH
KAAGDGHCASRQWFSKLTYLDIGTSRYIGDFTLLFLRVTLLFILALSGGM
AFGHRSQIDLASLQSQLFVWLHCWFFVLYPILLWSSLLTLRTLNSDAVEP
RRLWTFASAVFHVLVTLAQVELFRLILFNLAPQLRPSNGTDAFYSLSSSF
AGQRYIMFIASLIEFYFSTVPYFVEYLLATILISAVWETGCIFIRDMEHA
WIKIVLSIALFSLASILASINFLIANKLPGRKAKIPGRDPPPPLTT*
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