Ggra5631.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5631.t1
Unique NameGgra5631.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length997
Homology
BLAST of Ggra5631.t1 vs. uniprot
Match: A0A2V3IF26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF26_9FLOR)

HSP 1 Score: 458 bits (1179), Expect = 3.400e-142
Identity = 381/1061 (35.91%), Postives = 502/1061 (47.31%), Query Frame = 0
Query:    1 MTHSRQPRPRQAAVATRRRTRRAERQPAVDDVVEIWWDVDKTYYKGRLTRQLDTDMHFTMLYDDGETEDVNLHDEFWKFADADHAFRSPPASSDSDPELHH----DDAHLQQRDNAPQLRHHASIGERPSAAASTQLPNLPNNSKLLAHQHAPLANNAAMRTTKPPSESFGKGKSKLKRTKKQAADKSAIVKRTSRASTATLPQSQNASTNLHTSTPLPPSHAAAHLADPVPLNKVPGSAVANMADNVQNLSSSNNHFSPSTQAVPVRMKLVKTADAKANHPNSNPAVVQKVFSGTKRKLPT-------------------------------EPSPPSPHQNRPDTESAANIEPAQHVYHVRQQHDVHQHRKTDTETNQIDKTIPSQPLPAGTSGNISNLSSP-TRRRGVRRRIHSLADENSTDSS---SSPNAPTKK-VTPMSMGDAMEIDVNKDSQTRPMIGE--------ARDHSIPLK----------SRMEVKQ------ENV-------INDIR-HGEAEQNGDVDDHASG-SVLVGNEQNISVQANQMNNTD---------------TEVIDSSKKSVSPLRVTNEDVETQLREEPRAKNSM--NVPNLELISPVSGLPELDTCIDAAFGRRLDPVEKHLNNLTTEVQQIKSGFDSARQMFEGLVATKES-DIKAVKVDMVSLDQKLGTVHDQIGALREDMKIFLTDNQSIKRDMAIVISFLRQQAQIQSQREQVAVANPVRSTAMPASRNVPPRQNGQLAVAAHVQPNVQSR----TNVHHYAAPVVQRPVRNPVEYQQRPSPAVDAAHAPRQRRNPFPVQRPASVQNTRHAPVRSAQVAPQATSVPGQVHRVQQQRSHVSVQGTPTVTVREQPTGSQPASYAVTYGENRSRTEVFTYQVMELVARQVTVWLLETPHEYHKSGMSLETWAKRTSSTTYARIAPRLAMFRSYEHAKSTLSLSLSNGVVDVTWFMSPFENQCTERARRNYDAWDPPPNDEEWMAEMHLLKELAVGFHRTFQNYSHPESTVLEVSVLLTRRAARDYEEAGYRPIL 966
            MT  R  +PR A  +TRRRTR   RQP V+D V+IWWDVDKTYY+GRL++QLD  MHF ++YDDG+TED+NLH+EFWKF    H     P S +  PE       DD HL Q        H  +       +AS+ LP   + SK    +H P     A     PP++S       + +T    A  S     T+  +TA   Q +      H  +P P       L DP PL  V  +A           S   +   P T A   R  +VK        P S+PA   K  +  KR+L T                                 SP         T    N   A H + V Q           T  NQ     PS    A T  +++N  +  T ++  +RR+HSL  E++T  S   S P+A T   V   S+  A    + +D      + E        ++  S+P+K          S +  KQ      EN        + D R H     + ++ +H +  SV  GN+ + +   N+ + T                T +  S+  S  P       V  Q   +   K+    + PNL+ +SP SG  E D  ID   GR+L P+E+H++ LT EV  I+ GFDS RQ+ E     KES  +K +K  + +LDQK+  + + IG+++E +K  L DN SIKR++A V+S L+Q+ +  SQREQ    N  R   +     V P  NG +     V   V SR    +NVHHY       P RN ++YQQR +P  D                    QN                        VQ QR+  +                Q A+Y+V Y E R+  E FTYQV++LVARQ+TVWLLETPHE+HKSGM+LE WAK TSST YARIAPRLAMFRSY HA STLS+SL+N   ++TWF+ P+E  CT RARRNY+AWDPPP DEEW +E  LLKELA GFHR FQ+Y   ESTVL  SV LTRR ARDYEEAGYRP+L
Sbjct:    1 MTKGRAVKPRVATSSTRRRTRHTGRQPQVNDQVDIWWDVDKTYYRGRLSKQLDHHMHFRIVYDDGDTEDINLHNEFWKFV---HPVSQQPPSFNDAPEFDQLSLDDDNHLNQP-------HQLTTNN----SASSPLP--ASASKSTNKRHDPPPKPKAT----PPAKS-------VIQTSVSTAPSSTTHPATTTVNTAXXXQKR-----AHPKSPQPSETPL--LIDPAPLTNVSSAAK----------SQPPSEKPPRTPAKTSRPSVVK--------PKSHPA--NKSVASGKRRLSTTFQASYVTQQRQQHPAXXXXXXXXXXXQQNQHSSPKXXXXXXXPTTMTPNHSTAAHPHAVTQ----------STAPNQGKTRTPSSSHSASTPVDLANKPATITSQKTKKRRLHSLRTEDNTHGSTQSSPPHASTAAAVATASIAAAQLRRIKRDETVCEDMPEPSGDAQFASKSPSLPIKVSLKRSALQPSLLSTKQSVMNQHENTGSHNATAVRDARLHALKTIDKELSEHGNKESVHRGNDPSCAPNWNERDATKILSSGGAENNATGAGTGIGASAADSRGPT------VRLQQFHDGDEKDHRIGDDPNLDFVSPASGHAERDAGIDEMLGRKLAPIERHMSKLTDEVHVIRGGFDSTRQLVETANRQKESFPMKEIKSTLSALDQKVALLCEHIGSVQEQLKAGLADNLSIKRELARVVSLLQQEPRFTSQREQAMPGNTGRVPDVRQPPRVQPTANGSVNPVRRVSA-VPSRGGTYSNVHHYPTTPFPAP-RNVIQYQQRAAPTGDVVREVXXXXXXXXXXXXXXXQNV-----------------------VQVQRNEANA-------------NPQQATYSVNYTEGRNAQESFTYQVLDLVARQITVWLLETPHEHHKSGMALELWAKHTSSTAYARIAPRLAMFRSYVHASSTLSISLNNNASELTWFIRPYETGCTSRARRNYNAWDPPPTDEEWKSETVLLKELASGFHRAFQSYGPLESTVLATSVALTRRTARDYEEAGYRPLL 953          
BLAST of Ggra5631.t1 vs. uniprot
Match: R7QL72 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL72_CHOCR)

HSP 1 Score: 155 bits (392), Expect = 7.980e-35
Identity = 77/163 (47.24%), Postives = 105/163 (64.42%), Query Frame = 0
Query:  801 GENRSRTEVFTYQVMELVARQVTVWLLETPHEYHKSGMSLETWAKRTSSTTYARIAPRLAMFRSYEHAKSTLSLSLSNGVVDVTWFMSPFENQCTERARRNYDAWDPPPNDEEWMAEMHLLKELAVGFHRTFQNYSHPESTVLEVSVLLTRRAARDYEEAGYR 963
            GE R+R       V  LVARQVTVWLLETPHEY+    S+  WA RT+++T+ ++A RL+ F S+  A   L  SL N  V++ WF+SP  N+   RARRNY AWDPPP+DEEW AEM LL+E+A  F R  + Y+  + T++EV   +++ AA D  +  Y+
Sbjct:  935 GELRAR-------VSHLVARQVTVWLLETPHEYNPRDGSVTAWAHRTATSTFEKVAVRLSQFGSFMQAYQILCSSLGNDAVELQWFVSPGGNEHLRRARRNYAAWDPPPSDEEWTAEMSLLREIAERFDRAMEKYNRRDKTMIEVCAEVSQLAAADGTDVAYQ 1090          
The following BLAST results are available for this feature:
BLAST of Ggra5631.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IF263.400e-14235.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QL727.980e-3547.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 18..74
e-value: 3.3E-7
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 713..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1202466..1205534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5631.t1Ggra5631.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1202466..1205534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5631.t1 ID=Ggra5631.t1|Name=Ggra5631.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=997bp
MTHSRQPRPRQAAVATRRRTRRAERQPAVDDVVEIWWDVDKTYYKGRLTR
QLDTDMHFTMLYDDGETEDVNLHDEFWKFADADHAFRSPPASSDSDPELH
HDDAHLQQRDNAPQLRHHASIGERPSAAASTQLPNLPNNSKLLAHQHAPL
ANNAAMRTTKPPSESFGKGKSKLKRTKKQAADKSAIVKRTSRASTATLPQ
SQNASTNLHTSTPLPPSHAAAHLADPVPLNKVPGSAVANMADNVQNLSSS
NNHFSPSTQAVPVRMKLVKTADAKANHPNSNPAVVQKVFSGTKRKLPTEP
SPPSPHQNRPDTESAANIEPAQHVYHVRQQHDVHQHRKTDTETNQIDKTI
PSQPLPAGTSGNISNLSSPTRRRGVRRRIHSLADENSTDSSSSPNAPTKK
VTPMSMGDAMEIDVNKDSQTRPMIGEARDHSIPLKSRMEVKQENVINDIR
HGEAEQNGDVDDHASGSVLVGNEQNISVQANQMNNTDTEVIDSSKKSVSP
LRVTNEDVETQLREEPRAKNSMNVPNLELISPVSGLPELDTCIDAAFGRR
LDPVEKHLNNLTTEVQQIKSGFDSARQMFEGLVATKESDIKAVKVDMVSL
DQKLGTVHDQIGALREDMKIFLTDNQSIKRDMAIVISFLRQQAQIQSQRE
QVAVANPVRSTAMPASRNVPPRQNGQLAVAAHVQPNVQSRTNVHHYAAPV
VQRPVRNPVEYQQRPSPAVDAAHAPRQRRNPFPVQRPASVQNTRHAPVRS
AQVAPQATSVPGQVHRVQQQRSHVSVQGTPTVTVREQPTGSQPASYAVTY
GENRSRTEVFTYQVMELVARQVTVWLLETPHEYHKSGMSLETWAKRTSST
TYARIAPRLAMFRSYEHAKSTLSLSLSNGVVDVTWFMSPFENQCTERARR
NYDAWDPPPNDEEWMAEMHLLKELAVGFHRTFQNYSHPESTVLEVSVLLT
RRAARDYEEAGYRPILSLTNDAQRQHEAQVYNGQPRVTPISGWRPT*
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