Ggra5625.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5625.t1
Unique NameGgra5625.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length604
Homology
BLAST of Ggra5625.t1 vs. uniprot
Match: A0A2V3IF16 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF16_9FLOR)

HSP 1 Score: 626 bits (1615), Expect = 2.210e-217
Identity = 329/605 (54.38%), Postives = 425/605 (70.25%), Query Frame = 0
Query:    1 MPRSKRKAKAIQDFQKKKTKLGRKARPDNFTNTTVKQKQVFVPDQSRSEEQLTSTQTGLSLTELLSRTRHHNGNTRTAAFNALTNSLKFKNAVAHLAIVLSPASVIKAAAVGIADENSPTRISARNLLTHVWNFLDDVQPFRSFFATATLACLSHIRLDIRLDGARTLSALLGTNRLTSEQMFADTSNPLESLGDILSVMNGVKGRTVVMDTICSLCDRFLRGENIENGRPTPPSRDGLQQSAQKGMP--LPFFYHRSRSATNDKPAGQLSAKLPVQLASNLITRVANLVTECFPLAETRKDTNKYNMFLSASQALHRLVVNCSSEVDYKPVQRCLKLWSDEDVGNLVSTADINLALTAIHLGRFGACNDFLVSALKAKSYPPGLEVCIADYIEKCDDNSEVLEAWCNRLEAAARKGNAAILYRSLGICEVVFRSKDRNGSTAWQILECLPLVIQACVNHKGD-SGHSDNYVSLFIKLFSTSYRSFRATRSNEVRLQAVVKNLIDIVCSKRKALHLKGKEVNEIVGILVAAEMMTSDEVVPFIGYCYREGEVDCAERFLMGVEAVAVNDGEEKFRAVALTRALKRVKPAPNALVNAQLERIEAAI 602
            MPRSKRKA A QDFQKKKTKLGRKARPDNFTNTTVK KQVFVPDQSRS EQL+STQTGL L +LLSRTRHHN NTRTAAFNALTN++KF+NA AH A++L+PA  I AAA G+ DE    R ++ N L  +W F+ DV+PFRS  +TA LACLSHIRLDIRL  AR L ALLG  R+++EQ+FA+T+NPLESL D+LSV  G KGRTVV+D + ++C    R       +     R   Q++    +   L F+YHR RS   +     L ++L VQLA+ LI+RVANL TECFPLAETR+D  K  +  SA+Q LH++V    + VD+KPV+R L LWS+ED G   S  D+NLA TAIHLG F  C +F++SA+K KS     E C+A+Y++ CDD S+VLE W  R E AAR+GN ++L RS+ IC+VV   +DR+ +  WQ+L C+PL +QAC   + D S  + + ++  I LFS SYR     + +E  L+A+V+ LID+VC++  A  L+ K V+EIVGI+VAA ++TSD VV F+G C+   +   AERFLMGVEAV +N+GEE+ RAVA+ R L  V    +A + +QL+RIEAA+
Sbjct:    1 MPRSKRKA-ATQDFQKKKTKLGRKARPDNFTNTTVKHKQVFVPDQSRSAEQLSSTQTGLPLGDLLSRTRHHNFNTRTAAFNALTNAVKFRNATAHSALILAPALGISAAAFGLGDETPAVRTASHNFLLSLWRFVSDVRPFRSIVSTALLACLSHIRLDIRLHSARALIALLGVQRISAEQLFAETANPLESLCDMLSVTTGTKGRTVVLDAVYAICGNSSRNSVAHQSQTPSRDRTPRQRTELSSVEATLSFYYHRPRSTVTNLRGIPLCSRLSVQLATTLISRVANLTTECFPLAETRRDPAKVALLQSATQTLHQIVTMSVANVDHKPVERALILWSEEDNGARFSAPDVNLARTAIHLGMFDVCREFIISAMKVKSSVGDFEACVAEYMKGCDDVSQVLETWATRFETAAREGNMSLLSRSMKICDVVLEREDRDKTVLWQLLTCIPLAVQACTRGRKDISAEAPSNITGLIDLFSRSYRRLAGRKQDEDELEALVRKLIDVVCTQTAAFGLEEKSVDEIVGIVVAAGLITSDAVVSFVGQCFASEKAPLAERFLMGVEAVVMNNGEERLRAVAMARTLLEVNGGVSASLRSQLQRIEAAV 604          
BLAST of Ggra5625.t1 vs. uniprot
Match: A0A168KDE9 (Pre-rRNA-processing protein n=5 Tax=Mucor TaxID=4830 RepID=A0A168KDE9_MUCCL)

HSP 1 Score: 72.4 bits (176), Expect = 1.430e-9
Identity = 50/170 (29.41%), Postives = 96/170 (56.47%), Query Frame = 0
Query:    5 KRKAKAIQDFQKKKTKLGR-KARPDNFTNTTVKQKQVFVPDQSRSEEQL--TSTQTGLSLTELLSRTRHHNGNTRTAAFNALTNSLKFKNAVAHLAIVLSPASVIKAAAVGI-ADENSPTRISARNLLTHVWNFLD--DVQPFRSFFATATLACLSHIRLDIRLDGARTL 168
            K+KA  ++DF+KKK K+G+ K+ PDNFT+T+ K K + +P+QS +E++    +T   L+L +L+ + +H+N   +  A + LT+        +H A+++S   ++    + +  D++   R +  N L   +  +D  ++QPF       T + ++HI  D+RLD  + +
Sbjct:    6 KKKAAKMEDFKKKKLKVGKQKSVPDNFTDTSFKSKSISLPNQSINEDKSHEITTSRNLTLADLVVQLKHYNAGVKKEALSGLTDICH-----SHPALLVSSLGLVVNGVLKLFVDDDRDVRKATLNYLKSTFVDIDRVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLM 170          
BLAST of Ggra5625.t1 vs. uniprot
Match: A0A8H7QSZ4 (Pre-rRNA-processing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QSZ4_9FUNG)

HSP 1 Score: 72.0 bits (175), Expect = 1.940e-9
Identity = 51/170 (30.00%), Postives = 94/170 (55.29%), Query Frame = 0
Query:    5 KRKAKAIQDFQKKKTKLGRKAR-PDNFTNTTVKQKQVFVPDQSRSEEQL--TSTQTGLSLTELLSRTRHHNGNTRTAAFNALTNSLKFKNAVAHLAIVLSPASVIKAAAVGI-ADENSPTRISARNLLTHVWNFLD--DVQPFRSFFATATLACLSHIRLDIRLDGARTL 168
            K+KA  ++DF+KKK K+G+K   PDNFT+T+ K K + +P+QS +E++    +T   L+L +L+ + +H+N   +  A + LT+        AH  +++S   ++    + +  DE+   R +  N L   +  +D  ++QPF       T + ++HI  D+RLD  + +
Sbjct:    6 KKKAAKMEDFKKKKLKVGKKKLVPDNFTDTSFKSKSITLPNQSINEDKSHEITTSRNLTLPDLVVQLKHYNSGVKKEALSGLTDICT-----AHPELLVSSLGLVVNGVLKLFVDEDRDVRKAILNFLKDTFVDIDLVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLM 170          
BLAST of Ggra5625.t1 vs. uniprot
Match: A0A8H7SXF1 (Pre-rRNA-processing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SXF1_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 1.020e-8
Identity = 50/169 (29.59%), Postives = 93/169 (55.03%), Query Frame = 0
Query:    5 KRKAKAIQDFQKKKTKLGRKAR-PDNFTNTTVKQKQVFVPDQSRSEEQL--TSTQTGLSLTELLSRTRHHNGNTRTAAFNALTNSLKFKNAVAHLAIVLSPASVIKAAAVGIADENSPTRISARNLLTHVWNFLD--DVQPFRSFFATATLACLSHIRLDIRLDGARTL 168
            K+KA  ++DF+KKK K+G++ + PDNFT+T+ K K + +P+QS +E++    +T   L+L +L+ + +H+N   +    +AL+      ++  HL +V S   V+        D++   R +  N L   +  +D  ++QPF       T + ++HI  D+RLD  + +
Sbjct:    6 KKKAAKMEDFKKKKLKVGKQKQVPDNFTDTSFKSKSITLPNQSINEDKSHEITTSRNLTLADLVVQLKHYNSGVK-KGISALSGLTDLCSSYPHL-LVSSLGLVVNGVLKLFVDDDRDVRKATLNFLKDTFVEVDLVELQPFMPLLIIYTCSAMTHIFEDVRLDAVKLM 172          
BLAST of Ggra5625.t1 vs. uniprot
Match: A9V5M5 (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5M5_MONBE)

HSP 1 Score: 67.0 bits (162), Expect = 6.150e-8
Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = 0
Query:   13 DFQKKKTKLGRKARPDNFTNTTVKQKQVFVPDQSRSEEQLTSTQTGLSLTELLSRTRHHNGNTRTAAFNALTNSLKFKNAVAHLAIVLSPASVIK---AAAVGIADENSPTRISARNLLTHVWNFLDD--VQPFRSFFATATLACLSHIRLDIRLDGARTLSALL 172
            DFQKKKTK+GRKA  +N TNT+   + + +  Q + ++     + G  L +L ++  HHN +TR  +       ++      H A+V  P+SV++   A    + D+++P R +   LL  + + +    +QPFR      T+  ++ +  D+R D   T++  L
Sbjct:   20 DFQKKKTKVGRKAIAENATNTSFATRSINLRTQLQRDDDELVNERGQGLKDLSAKCSHHNAHTRADSLQGFVQLIEL-----HPAVVEQPSSVLRILEATLRLVNDDHAPVRRALAQLLHLLAHQVPRALLQPFRELIVAQTVIAMTSLNHDVRYDALDTVALWL 179          
The following BLAST results are available for this feature:
BLAST of Ggra5625.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IF162.210e-21754.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A168KDE91.430e-929.41Pre-rRNA-processing protein n=5 Tax=Mucor TaxID=48... [more]
A0A8H7QSZ41.940e-930.00Pre-rRNA-processing protein n=1 Tax=Mucor saturnin... [more]
A0A8H7SXF11.020e-829.59Pre-rRNA-processing protein n=1 Tax=Thamnidium ele... [more]
A9V5M56.150e-828.48Predicted protein (Fragment) n=1 Tax=Monosiga brev... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR16056UNCHARACTERIZEDcoord: 1..358
IPR037947Testis-expressed protein 10/pre-rRNA-processing protein Ipi1PANTHERPTHR16056:SF2TESTIS-EXPRESSED PROTEIN 10coord: 1..358
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 61..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1188866..1190677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5625.t1Ggra5625.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1188866..1190677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5625.t1 ID=Ggra5625.t1|Name=Ggra5625.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=604bp
MPRSKRKAKAIQDFQKKKTKLGRKARPDNFTNTTVKQKQVFVPDQSRSEE
QLTSTQTGLSLTELLSRTRHHNGNTRTAAFNALTNSLKFKNAVAHLAIVL
SPASVIKAAAVGIADENSPTRISARNLLTHVWNFLDDVQPFRSFFATATL
ACLSHIRLDIRLDGARTLSALLGTNRLTSEQMFADTSNPLESLGDILSVM
NGVKGRTVVMDTICSLCDRFLRGENIENGRPTPPSRDGLQQSAQKGMPLP
FFYHRSRSATNDKPAGQLSAKLPVQLASNLITRVANLVTECFPLAETRKD
TNKYNMFLSASQALHRLVVNCSSEVDYKPVQRCLKLWSDEDVGNLVSTAD
INLALTAIHLGRFGACNDFLVSALKAKSYPPGLEVCIADYIEKCDDNSEV
LEAWCNRLEAAARKGNAAILYRSLGICEVVFRSKDRNGSTAWQILECLPL
VIQACVNHKGDSGHSDNYVSLFIKLFSTSYRSFRATRSNEVRLQAVVKNL
IDIVCSKRKALHLKGKEVNEIVGILVAAEMMTSDEVVPFIGYCYREGEVD
CAERFLMGVEAVAVNDGEEKFRAVALTRALKRVKPAPNALVNAQLERIEA
AIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037947TEX10/Ipi1
IPR016024ARM-type_fold