Ggra5624.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5624.t1
Unique NameGgra5624.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Homology
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BLAST of Ggra5624.t1 vs. uniprot
Match: A0A2V3J3T7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3T7_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 3.310e-63
Identity = 112/150 (74.67%), Postives = 124/150 (82.67%), Query Frame = 0 
Query:   47 MSSLNFVLPSPLTARTLPLPVAATN-STFVAR-PLLLTAARSRSATLRMSADSTREDGYVIRESEYRDPDVDSDDDSGDGFMGEAEMDDILGVSMPDDLASFERREIQNTQTREELVEKLKEIKFRRRDVMVDRRRGMGMDNAENYLRNL 194
            MSSLNFVLPSPLT      P  +++ S F  R PL ++A+  R A LRMS+DS R DGYVIRES YRDPD +SDDDSGDGFMGEAEMDDILGVSMPDDLASFERREI NTQ+REELVEKLKEIKFRRRD+M DRRRG+GMDN  NYL+NL
Sbjct:    1 MSSLNFVLPSPLTTTVFAAPALSSSCSKFAPRTPLSISASVRRGAVLRMSSDSDRSDGYVIRESSYRDPDENSDDDSGDGFMGEAEMDDILGVSMPDDLASFERREIANTQSREELVEKLKEIKFRRRDIMDDRRRGLGMDNVNNYLQNL 150
The following BLAST results are available for this feature:
BLAST of Ggra5624.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3T73.310e-6374.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 119..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1187521..1188105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5624.t1Ggra5624.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1187521..1188105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5624.t1 ID=Ggra5624.t1|Name=Ggra5624.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MLKKWSPVAVPSPSSFASLRRERRLPTVRRVCLEFVSVRLIVQSITMSSL
NFVLPSPLTARTLPLPVAATNSTFVARPLLLTAARSRSATLRMSADSTRE
DGYVIRESEYRDPDVDSDDDSGDGFMGEAEMDDILGVSMPDDLASFERRE
IQNTQTREELVEKLKEIKFRRRDVMVDRRRGMGMDNAENYLRNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS