Ggra5617.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5617.t1
Unique NameGgra5617.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length148
Homology
BLAST of Ggra5617.t1 vs. uniprot
Match: R7QFT3 (Uncharacterized protein n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QFT3_CHOCR)

HSP 1 Score: 270 bits (690), Expect = 2.700e-91
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0
Query:    2 AVTKAKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            A + AKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEP+LILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGL+AYYQKFVDE  K+ELK TLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    3 AASTAKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPMLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLIAYYQKFVDEATKKELKDTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 148          
BLAST of Ggra5617.t1 vs. uniprot
Match: M2VVH0 (40S ribosomal protein S16e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVH0_GALSU)

HSP 1 Score: 239 bits (611), Expect = 2.790e-79
Identity = 117/145 (80.69%), Postives = 134/145 (92.41%), Query Frame = 0
Query:    3 VTKAKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            V K KN VQVFGRKKTAVAVA +TG+GKGL+++NG PL+L+EPE LR+KV EP+LILGQ++FAD+DIRL+VKGGG T+QIYAIRQAIAKG+VAYYQKFVDE  KRELK TL++YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    2 VAKTKNMVQVFGRKKTAVAVATVTGSGKGLIRVNGVPLELVEPETLRIKVFEPILILGQDKFADLDIRLKVKGGGRTSQIYAIRQAIAKGIVAYYQKFVDEALKRELKDTLISYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A1X6PKD2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKD2_PORUM)

HSP 1 Score: 232 bits (591), Expect = 2.920e-76
Identity = 113/141 (80.14%), Postives = 130/141 (92.20%), Query Frame = 0
Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            KNSVQVFGRKKTAVAVA I G+GKG+MK+NG P++LLEPE LRVKV EPLL+LG ERFA +D+R+RV+GGGYT+QIYAIRQAIAKG+VAYYQK+VDEV K+E+K  LL+YDR+LLVADPRRCEPKKFGG GARARFQKSYR
Sbjct:    4 KNSVQVFGRKKTAVAVALIKGDGKGMMKVNGCPIELLEPEILRVKVFEPLLLLGPERFAGVDVRIRVRGGGYTSQIYAIRQAIAKGIVAYYQKYVDEVTKKEIKDLLLSYDRSLLVADPRRCEPKKFGGHGARARFQKSYR 144          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A6T6PN43 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6PN43_9RHOD)

HSP 1 Score: 227 bits (579), Expect = 2.040e-74
Identity = 109/141 (77.30%), Postives = 128/141 (90.78%), Query Frame = 0
Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            +NSVQVFGRKKTAVAVA + GNGKGL+K+NG PLDLLEPE LRVK LEP+LILGQERF D+DIR+RVKG G+T+Q+YAIRQAIAKG+ AYY K+VDE  +++L+  L++YDR+LLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    5 RNSVQVFGRKKTAVAVALVQGNGKGLVKVNGCPLDLLEPEVLRVKALEPILILGQERFVDLDIRIRVKGSGFTSQVYAIRQAIAKGICAYYAKYVDEATRKQLRDLLISYDRSLLVADPRRCEPKKFGGRGARARFQKSYR 145          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A1J3K4P6 (40S ribosomal protein S16 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K4P6_NOCCA)

HSP 1 Score: 218 bits (555), Expect = 8.640e-71
Identity = 108/139 (77.70%), Postives = 125/139 (89.93%), Query Frame = 0
Query:    9 SVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            SVQVFG+KKTAVAVAH    G+G++KINGTPL+L++PE LR KV EP+L+LG ERF+++DIR+RVKGGG+T+QIYAIRQAIAK LVAYYQKFVDE  K+E+K  LL YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    6 SVQVFGKKKTAVAVAHCK-QGRGIIKINGTPLELVQPEILRFKVFEPMLLLGNERFSNVDIRVRVKGGGHTSQIYAIRQAIAKSLVAYYQKFVDEASKKEIKDILLGYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A7S0T5W6 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5W6_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 8.260e-69
Identity = 104/142 (73.24%), Postives = 126/142 (88.73%), Query Frame = 0
Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQER-FADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            KNSVQ FGRKKTAVAVAH+   GKG++K+NG PL+LLEPEGLR+KV EP+L+LG+ER F+D+D R+RV GGG T+Q+YA+RQAIAKG+VAYYQK++DEV K ELK  L+AYD+ LLVADPRR EPKKFGGRGAR+R+QKSYR
Sbjct:    3 KNSVQTFGRKKTAVAVAHVVP-GKGMIKVNGKPLELLEPEGLRIKVFEPILLLGKERYFSDLDFRIRVNGGGQTSQVYAVRQAIAKGIVAYYQKYMDEVTKNELKDILIAYDKQLLVADPRRMEPKKFGGRGARSRYQKSYR 143          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A5J4Z8Z2 (40S ribosomal protein S16-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8Z2_PORPP)

HSP 1 Score: 213 bits (541), Expect = 1.140e-68
Identity = 103/141 (73.05%), Postives = 124/141 (87.94%), Query Frame = 0
Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            K SVQVFGRKKTAVAVAH+T  GKG++K+NG PL+LLEPEGLR+KV EP+L+LGQERFA++D R+RVK GG T+Q+YA+RQAI+KGLVAYYQK+ DEV K ELK  L+AYD+ LLVADPRR EPKK GGRGAR+++ KSYR
Sbjct:    3 KQSVQVFGRKKTAVAVAHVTA-GKGMIKVNGKPLELLEPEGLRIKVFEPILLLGQERFAELDFRIRVKSGGQTSQVYAVRQAISKGLVAYYQKYRDEVSKNELKDILIAYDKQLLVADPRRMEPKKIGGRGARSKYGKSYR 142          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A7J7IMG1 (40S ribosomal protein S16 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IMG1_9RHOD)

HSP 1 Score: 210 bits (534), Expect = 1.280e-67
Identity = 103/140 (73.57%), Postives = 123/140 (87.86%), Query Frame = 0
Query:    8 NSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            N+VQ FGRKKTAVAVAH    G+GL+K+NG PLDL++PE LR KV EPLL+LG+E FA++DIR++V+GGG TAQIYAIRQAI+K +VAYYQKFVDE  K+ +K  L++YDR+LLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    3 NAVQTFGRKKTAVAVAHCK-EGRGLVKVNGVPLDLVQPELLRAKVFEPLLLLGEETFANVDIRVQVRGGGTTAQIYAIRQAISKAIVAYYQKFVDEASKKTIKDILVSYDRSLLVADPRRCEPKKFGGRGARARFQKSYR 141          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A251TVB5 (Putative 40S ribosomal protein S16 n=15 Tax=Mesangiospermae TaxID=1437183 RepID=A0A251TVB5_HELAN)

HSP 1 Score: 209 bits (533), Expect = 2.070e-67
Identity = 101/140 (72.14%), Postives = 122/140 (87.14%), Query Frame = 0
Query:    8 NSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            NSVQ FGRKKTAVAV H  G G+GL+K+NG P++ L+PE LR K  EP+L++G+ +FA +D+R+RVKGGG+T+QIYAIRQ+I+K LVAYYQKFVDE QK+E+K  L+ YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct:    7 NSVQCFGRKKTAVAVTHCKG-GRGLIKVNGAPIEFLQPEILRTKAFEPILLIGRSKFAAVDMRIRVKGGGHTSQIYAIRQSISKALVAYYQKFVDEEQKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145          
BLAST of Ggra5617.t1 vs. uniprot
Match: A0A098VZ41 (40S ribosomal protein S16 n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VZ41_9MICR)

HSP 1 Score: 209 bits (533), Expect = 2.210e-67
Identity = 101/141 (71.63%), Postives = 125/141 (88.65%), Query Frame = 0
Query:    7 KNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRVKVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKFVDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
            K SVQ FGRKK+A AVAH T  GKGL+K+NG PL+L+EPE LR+KV EP+L+LG+ RF++IDIR+RV GGG+T+QIYAIRQA+AKG+VAYYQKF+DE  K+E++  L+A+DR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct:    8 KQSVQTFGRKKSATAVAHCTA-GKGLIKVNGKPLELVEPEILRLKVFEPILLLGRSRFSNIDIRIRVSGGGHTSQIYAIRQALAKGVVAYYQKFIDEASKKEIRDQLVAFDRSLLVADPRRCEPKKFGGPGARARYQKSYR 147          
The following BLAST results are available for this feature:
BLAST of Ggra5617.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QFT32.700e-9193.84Uncharacterized protein n=2 Tax=Rhodymeniophycidae... [more]
M2VVH02.790e-7980.6940S ribosomal protein S16e n=1 Tax=Galdieria sulph... [more]
A0A1X6PKD22.920e-7680.14Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A6T6PN432.040e-7477.30Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1J3K4P68.640e-7177.7040S ribosomal protein S16 (Fragment) n=1 Tax=Nocca... [more]
A0A7S0T5W68.260e-6973.24Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z8Z21.140e-6873.0540S ribosomal protein S16-1 n=1 Tax=Porphyridium p... [more]
A0A7J7IMG11.280e-6773.5740S ribosomal protein S16 n=2 Tax=Cyanidiaceae Tax... [more]
A0A251TVB52.070e-6772.14Putative 40S ribosomal protein S16 n=15 Tax=Mesang... [more]
A0A098VZ412.210e-6771.6340S ribosomal protein S16 n=1 Tax=Mitosporidium da... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000754Ribosomal protein S9PFAMPF00380Ribosomal_S9coord: 14..147
e-value: 3.2E-32
score: 111.6
IPR000754Ribosomal protein S9PANTHERPTHR21569RIBOSOMAL PROTEIN S9coord: 6..147
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 2..147
e-value: 3.3E-52
score: 178.5
NoneNo IPR availablePANTHERPTHR21569:SF3530S RIBOSOMAL PROTEIN S9Pcoord: 6..147
IPR020574Ribosomal protein S9, conserved sitePROSITEPS00360RIBOSOMAL_S9coord: 75..93
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 9..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1169915..1170602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5617.t1Ggra5617.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1169915..1170602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5617.t1 ID=Ggra5617.t1|Name=Ggra5617.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=148bp
MAVTKAKNSVQVFGRKKTAVAVAHITGNGKGLMKINGTPLDLLEPEGLRV
KVLEPLLILGQERFADIDIRLRVKGGGYTAQIYAIRQAIAKGLVAYYQKF
VDEVQKRELKTTLLAYDRTLLVADPRRCEPKKFGGRGARARFQKSYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000754Ribosomal_S9
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR020574Ribosomal_S9_CS
IPR020568Ribosomal_S5_D2-typ_fold