Ggra5613.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5613.t1
Unique NameGgra5613.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length86
Homology
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A2V3IY02 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY02_9FLOR)

HSP 1 Score: 111 bits (277), Expect = 2.720e-30
Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 MSSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHMAKRDAAAAAREARIAARKDPA 84
            MSS A+ +G MGFALA+FSNGVRKLP+MRRPWEHV+Y GIG WLGS V   K   +A++ E MAKR+A AA RE+RIAARK  A
Sbjct:    1 MSSTALAYGCMGFALAAFSNGVRKLPVMRRPWEHVMYFGIGTWLGSKVDSFKTNNKALLAEQMAKREAVAAERESRIAARKSTA 84          
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A087SCX8 (Uncharacterized protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SCX8_AUXPR)

HSP 1 Score: 62.0 bits (149), Expect = 6.900e-11
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    1 MSSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHMAKRDAA 69
            M+ A ++ G +G  +  + N VRKLPLMR PWEHVL+ G G   G+ +   +ER    + E +AKR+AA
Sbjct:    1 MAPATIIGGLLGLGVQLYCNAVRKLPLMRNPWEHVLFIGAGAAFGNWLVDFEERTALELKEVLAKREAA 69          
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A5B8MVB2 (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVB2_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 2.970e-8
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    2 SSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDE 61
            +SAA+  G +GF    +SN VR+LP++R+PWEH +   +G   G  V  M+ER R  ++E
Sbjct:    3 ASAALFGGALGFMTQVYSNAVRRLPVLRKPWEHGIAGLVGAGFGVGVINMEERLRVYIEE 62          
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A7S3CAE5 (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CAE5_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 3.350e-8
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    2 SSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDE 61
            +SAA+  G +GF    +SN VR+LP++R+PWEH L S +G   G  V  M+ER R  ++E
Sbjct:   38 TSAALFGGGLGFLTQVYSNAVRQLPVLRKPWEHGLASVVGAGFGLAVIDMEERLRVYIEE 97          
BLAST of Ggra5613.t1 vs. uniprot
Match: D8RND9 (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RND9_SELML)

HSP 1 Score: 55.1 bits (131), Expect = 4.040e-8
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 MSSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHMA 64
            +S+  V    +G A+  + NG+RKLPLMR PWEHVL+ GIG +  + +   + R  A +++  A
Sbjct:    2 VSTPTVAGAVLGLAIQLYCNGMRKLPLMRHPWEHVLFMGIGAYAINELVAWEYRTEAALEKKKA 65          
BLAST of Ggra5613.t1 vs. uniprot
Match: A9RYS0 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RYS0_PHYPA)

HSP 1 Score: 54.7 bits (130), Expect = 5.860e-8
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 MSSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHM 63
            +++A +V   MG +   +SN VRKLPLMR PWEHVL  G+G   G+ V   + R +  +D+ +
Sbjct:    2 VATATMVGAIMGLSCQFYSNAVRKLPLMRHPWEHVLAIGLGAGFGNAVASWEVRLQEDLDKKL 64          
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A2P6V3Y0 (Excitatory amino acid transporter 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3Y0_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 1.380e-7
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    4 AAVVFG-FMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHMAKRDAA 69
            +A VFG  +G  +  + NGVRKLPL+R PW HVL++G G   G+ +   +ER    +   +AKRD A
Sbjct:    5 SAPVFGAVLGVGVQLYVNGVRKLPLLRDPWLHVLWAGAGASFGTWLNSFEERTEKDLHAMLAKRDEA 71          
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A5J4XJJ5 (Excitatory amino acid transporter 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XJJ5_9CHLO)

HSP 1 Score: 52.8 bits (125), Expect = 2.900e-7
Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 0
Query:    1 MSSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHMAKR 66
            M S A     +G ++  +SN +RK+PLMR+PWEH++  G G W+G+ +   + R    ++  +AKR
Sbjct:    1 MVSGAFFGACIGLSINLYSNALRKVPLMRQPWEHLIAIGGGAWVGNKIVEYENRTAKELEGMLAKR 66          
BLAST of Ggra5613.t1 vs. uniprot
Match: C1MP53 (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MP53_MICPC)

HSP 1 Score: 52.8 bits (125), Expect = 3.420e-7
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0
Query:   11 MGFALASFSNGVRKLPLMRRPWEHVLYSGIGVW 43
            MGF    F N +RKLPL+R PWEHVL++G GVW
Sbjct:   14 MGFGTQLFINALRKLPLLRNPWEHVLWTGGGVW 46          
BLAST of Ggra5613.t1 vs. uniprot
Match: A0A1X6PL75 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PL75_PORUM)

HSP 1 Score: 52.8 bits (125), Expect = 4.490e-7
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    3 SAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKGMKERGRAVVDEHMAKRDAAAAAREARIAARK 81
            S+A+ +G +G  +   SN +RKLPLMRRPWEHVL  G G+  G+ V          +++++ +  +A AA EA +A R+
Sbjct:    2 SSALFWGSVGVLVPLMSNSLRKLPLMRRPWEHVLAFGGGIVFGNGVNSAT----VYMEDNLERVRSARAAAEATMAMRR 76          
The following BLAST results are available for this feature:
BLAST of Ggra5613.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IY022.720e-3066.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A087SCX86.900e-1143.48Uncharacterized protein n=2 Tax=Auxenochlorella pr... [more]
A0A5B8MVB22.970e-841.67Uncharacterized protein n=1 Tax=Chloropicon primus... [more]
A0A7S3CAE53.350e-845.00Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
D8RND94.040e-839.06Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A9RYS05.860e-841.27Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A2P6V3Y01.380e-743.28Excitatory amino acid transporter 1 n=1 Tax=Micrac... [more]
A0A5J4XJJ52.900e-736.36Excitatory amino acid transporter 1 n=1 Tax=Trebou... [more]
C1MP533.420e-763.64Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A1X6PL754.490e-739.24Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009423NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2PFAMPF06374NDUF_C2coord: 4..64
e-value: 7.7E-5
score: 22.9
NoneNo IPR availablePANTHERPTHR36052EXCITATORY AMINO ACID TRANSPORTERcoord: 2..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..85
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 4..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1131809..1132243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5613.t1Ggra5613.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1131809..1132243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5613.t1 ID=Ggra5613.t1|Name=Ggra5613.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=86bp
MSSAAVVFGFMGFALASFSNGVRKLPLMRRPWEHVLYSGIGVWLGSNVKG
MKERGRAVVDEHMAKRDAAAAAREARIAARKDPAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009423NDUC2