Ggra5610.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5610.t1
Unique NameGgra5610.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length751
Homology
BLAST of Ggra5610.t1 vs. uniprot
Match: A0A2V3IY06 (Pumilio-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY06_9FLOR)

HSP 1 Score: 790 bits (2041), Expect = 8.420e-278
Identity = 411/676 (60.80%), Postives = 513/676 (75.89%), Query Frame = 0
Query:    1 MSAQTQKRFRKRGGAKKKKKIRDISEGAD-EQPLKPIHHSNSTPSSYFSGFTAAQEN--RLDNELESYLKKLQDELEALDPGAEIATKWQPHQSEDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQTSIHALRQISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGLPDDEPREARLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDKSVVKGIGQRAIEANFDRMIHDSCGSRFLERLILILGYEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDIINE--SDEELVSRKKARDVSNRHSHKRKRKRE 671
            M  + QKRFRKRGGAKKKKK R++    + E+   P   + +  S YFSGF+A   +  RLD ++++YL KLQDELE+LDPGAEIA+ W P  SED P S+LLARNALRELSSRV+E+ RDN  SR +EAL+  AKD+EVL   L+A+LDCG  R  D+A HR  SH ++T IHALR  S  E       LG T++SW DE++ +++R+PSGSHVFR+ LA LAGLPDDEP+EARLDDS PGKI +YI     +VP +WLQ V SIG+ +LES +LS+ +MLW PASC ALQALLSALAV +K + + IG++A+   FDR+  D CGSRFLERLIL+LG+EAVK   +G+LAE+A HPKANFC+QR+LL +KGRGQVM AWDELE S+ +LLGRG  REGVVLALLR+TEAEGD+NCRRRA+R+VI+A+GA+G KT+QL+G LA+GSE +WEKWR+ V++ ++   GL GK TD+LR P    SP+LLGTLMARCL+RF GG GQSARDSMATL+S ELL+L  +PVGSRLVEQW+ +T  ERS KNA R LKA +E G T I AVARN YGAMVLVKC+ +L  D+RKK MD L S  E LK H  GQ+VIRKCRVEQYMRR D+WEREET +ETR+RLF DII +  + + L     +R   ++H H+RK++ E
Sbjct:    1 MHDEPQKRFRKRGGAKKKKKNRELLPTTENERSAVPSSETANHASHYFSGFSAPTYDVKRLDEDIQNYLLKLQDELESLDPGAEIASSWHPSGSEDVPASILLARNALRELSSRVNEVARDNSGSRIMEALMSYAKDAEVLVGVLEAILDCGSSRFVDLATHRTGSHTVETVIHALRLTSSAENLPVFGRLGTTMTSWNDEELSEIMRNPSGSHVFRACLAALAGLPDDEPKEARLDDSDPGKIRSYIDMREIQVPGDWLQSVSSIGVNILESKTLSIEEMLWNPASCTALQALLSALAVANKPIAQRIGEKAMGVGFDRLAQDGCGSRFLERLILVLGHEAVKSCTEGRLAEYAHHPKANFCVQRILLSLKGRGQVMWAWDELESSISRLLGRGTAREGVVLALLRVTEAEGDDNCRRRASRAVIKAIGAVGSKTAQLSGILAMGSEGLWEKWRSMVKNVEKNAFGLQGKETDQLRAPSTTVSPRLLGTLMARCLIRFPGGAGQSARDSMATLSSNELLSLVADPVGSRLVEQWVAETSKERSSKNAIRVLKAIQEHGKTSIPAVARNAYGAMVLVKCISYLPTDQRKKAMDSLSSQFELLKKHRTGQIVIRKCRVEQYMRREDRWEREETARETRERLFVDIIEDDHNPDTLSGENFSRKRRDKHGHRRKQQSE 676          
BLAST of Ggra5610.t1 vs. uniprot
Match: R7QAI6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAI6_CHOCR)

HSP 1 Score: 575 bits (1481), Expect = 3.480e-192
Identity = 302/620 (48.71%), Postives = 418/620 (67.42%), Query Frame = 0
Query:   35 PIHHSNSTPSSYFSGF-TAAQENRLDNELESYLKKLQDELEALDPGAEIATKWQPHQS---EDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQTSIHALRQ--ISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGLPDDEPREARLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDKSVVKGIGQRAIEANFDRMIHDSCGSRFLERLILILGYEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDIINESDEE 648
            PI  + +    Y SGF +++  + L  +L SYL +LQ  L+ LDP   +AT +    +   +D PPSVLLARNA+ EL+ RV E+ RD + SR LE+LLR   D    +  L A LD GP R A +A H  ASHV+  ++ A+      DG+ ++ ++ +  TV  W      +V+ S SGSH FR+  ATLAG+P DEPREA+LDDS  G+I +YI+    +VP+EW   + ++   LL+  ++ +  MLW+P+SCAALQALL+ ++V +K +   + +   +   D+++ ++CGSRF+ER +L LG + V+G  KG+L E +  PKANF +QR+LLG++GRGQVM+AWDELE +VP++LG G+ REGVVL+LLR+TEAEGDENCRRRA+RSV RA GA+G++    AG L +GSEEMW +W+  V+   R  +G+  +  D L VP +  SP LLGTL+ARC+MRF+GGPGQ  RDSMATL+  EL+AL GN VGSRLVEQW+    LE S K A + + A       GILA A+NPYGA V+V+C   ++   RK +M+   S  E LK H+ GQ+V+RKCRVEQYMRR ++WE EET +ETR+RLF+DI+ + DEE
Sbjct:   27 PIAAAPNASVGYVSGFQSSSTPSTLSTDLSSYLSQLQSSLQELDPDGSLATTFAGSSTVDPDDPPPSVLLARNAIAELAPRVHEVARDAFGSRLLESLLRACADPGPPAALLGAALDAGPQRFAALAAHHAASHVVDAALQAIGGGWEGDGDARACLKKMADTVGKWTQSDFAEVVNSASGSHSFRAIAATLAGIPRDEPREAKLDDSERGRIRSYIERMAVDVPDEWHLALHTMTEGLLQDDAIDLQKMLWKPSSCAALQALLAGVSVGNKELALQLAEYCAKGQEDQLMRNACGSRFIERAVLCLGAKVVQGTYKGRLQELSKDPKANFVVQRILLGLRGRGQVMNAWDELEDAVPEMLGFGRAREGVVLSLLRVTEAEGDENCRRRASRSVARACGAVGERGKSFAGMLMMGSEEMWRRWQTDVKQLGRTGMGMYERMGDVLFVPKKLLSPSLLGTLIARCVMRFSGGPGQLMRDSMATLSGEELVALVGNAVGSRLVEQWVDGETLEVSKKIAAKVVNAISGDKAEGILAAAKNPYGAQVVVRCAGVVAGPLRKIMMEAFASDFEELKKHDCGQMVLRKCRVEQYMRRGEEWEHEETTRETRERLFTDILQDDDEE 646          
BLAST of Ggra5610.t1 vs. uniprot
Match: A0A7S1T9M3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9M3_9RHOD)

HSP 1 Score: 175 bits (443), Expect = 1.510e-42
Identity = 150/562 (26.69%), Postives = 268/562 (47.69%), Query Frame = 0
Query:   99 LLARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQTSIHALRQISDGEKKSAIENLGMTVSSWADEQ--ILDVLRSPSGSHVFRSTLATLAGLPDDEPREARLDDSSPGKIE-NYIK--TYGKEVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDKSVVKGIGQRAIE---ANFDRMIHDSCGSRFLERLILILGYEAV----KGHAKGKLAEFAGHPKANFCLQRMLL--GMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRG----DLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDII 642
            ++A N ++E+  ++  +V D   SRTLE ++      ++    L AL       V     HR ASHVL+  I  +     GE+  A+ N+        +E+  ++ +     GSHV R+ L TLA         A L  ++ G +E ++I   T    + +   Q+   I  R L   SL    +   P + + LQ L++ L +   S+ + I Q  +     NFD ++ D+ GSRFLE  ++ +  E +    +   +GK+   +     NF LQR++L  G+     V+   +EL+ S+ +LL  G+T  GVV+AL    E   D +C +  T+ +  AVGA G+    L G L    +E   +WR        G    D  L G            P   +LG+LM + ++RF  G  + A DS+A+L+  E+LAL  +  GSR++E ++     E S    G +L          +  + ++P G+ ++ K         R++++++L+  +E+L+  ++ + V+R CRV +Y+ R + W ++E  + ++++  +D++
Sbjct:  110 VVASNVVKEIRDQIHAVVCDPVGSRTLEVVVEYLAIEDLNVILLPALFT---GDVRTRMNHRFASHVLEKVIPRI----GGEQLDALVNV-------LEEEGALVAIADDRYGSHVLRTILQTLA--------HADLAMAARGSLEGDWILPITPDVSISKSERQLFVRIAKRFLREESL--LPLAKSPCASSVLQFLITGLQLLSSSLSRKISQHILGHHMENFDGLVKDNAGSRFLEVALMFMEGEQLLSLYQTSVRGKVVSMSKERNENFVLQRIILRAGLSSDPLVLGILNELKDSMGELLHIGRT--GVVVALANACEKASDPSCTKLFTKFICTAVGATGENAKDLVGLLLFFGKERLHRWRTWAHQRYEGACMSDAELGG------------PKVSILGSLMVQAILRFNHGNSRLANDSVASLSKSEILALCRDASGSRVLEAFLTGNAGESSKSRLGAYLLGQ-------LPEIVKDPSGSRIVEKVFVTSDYSRRRQMVEELLPHLESLQTDQYAKFVLRFCRVSEYLARKETWLQQEEKRSSKRKALNDLL 626          
BLAST of Ggra5610.t1 vs. uniprot
Match: W1NL73 (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1NL73_AMBTC)

HSP 1 Score: 97.1 bits (240), Expect = 4.230e-17
Identity = 146/596 (24.50%), Postives = 245/596 (41.11%), Query Frame = 0
Query:   81 EIATKWQPHQSEDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLR-CAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQTSIHALR-QISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGLPDDEPREARLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIG--IRLLESTSLSVADMLWEPA-----SCAALQALLSALAVTDKSVVKGI----GQRAIEANFDR-------------MIHDSCGSRFLERLILI----LGYEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALL----RITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDII 642
            EI++  + + ++ E  SVL   NAL E   +  ++  D   S  LE LL+ C+ D   L +FL   L C  D    +A+ +  SHV +T+  AL   I      SAIE +   +        +DV+ S  GSHV RS L  L G+P D      +  S+    E    +  K   E   Q+ +S    ++ L    LS A    E           LQ +L  L   D+ ++  I    G  A +  ++              +I D   S  +E ++ +    L  E      +G L + + H  +NF +Q +    + +GQ+   W+EL P   +LL   K+  GVV  LL    R+   E      +   +++  AV      TS +   +       +E+     + +    LG      + L           LG LM + + R      Q    S+ ++ S+ +L    +  GSR++E ++     + S K   + +   K  G  G LA+ ++  G   + KC   ++V  ++ +   L+S    L   + G  ++RKC V +Y  + DQW   +  KET ++ F D+ 
Sbjct:   53 EISSLLEGNVNDLEERSVLCG-NALEETRGKELQIASDKILSHVLEILLQSCSVDQ--LCSFL---LSCAND-FPSIAIDQSGSHVAETAFKALALYIQYNNADSAIEQVLRKICQVVMGNTVDVMCSSYGSHVMRSLLCLLKGVPLDFLENFHVTKSATVLAERLKSSSRKSDGEHLAQMQQSFPDLLKFLVRGMLSNASEHMETLRVHNFGTLVLQTVLKLLEGDDEELLHIIPILLGCNARDVTWEGEILSIVSSQTVLGLIKDPAFSHLMEVILEVAPDSLYSEIFTKVFRGSLFDLSCHQCSNFVVQALASSTRHQGQMSLLWEELGPKFKELLKLRKS--GVVACLLAGCLRLNTLE------KECCQALANAVCLESGSTSCIIPRIFFLENYFFEE-----KSNWNWPLG------ERLST---------LGCLMLQIIFRLPREHTQQYTSSLTSMESIHVLETAKDAGGSRVIEAFLSS---DASVKQKQKIVSKLK--GHFGELAMHQS--GCFTVEKCFSAVNVPLKEVICSDLLSLQNELSKTKHGPHLLRKCDVARYSNKPDQWRSAQASKETTKKEFLDLF 606          
BLAST of Ggra5610.t1 vs. uniprot
Match: A0A058Z9H6 (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z9H6_FONAL)

HSP 1 Score: 96.3 bits (238), Expect = 8.110e-17
Identity = 141/583 (24.19%), Postives = 248/583 (42.54%), Query Frame = 0
Query:  100 LARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQ---TSIHAL--RQISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGL-PDDEPREAR----LDDSSPGKIENYIKTY-GKEVPE----EWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDK--------SVVKGIGQRAIEANFDR------MIHDSCGSRFLERLILILG-------YEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGS-EEMWEKWRNAVR-DSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDIINE 644
            L  N L E+  +V+  + D+ +SRTLE +++   D + L+   + ++D  P +++D   H   SHV+Q   T  HA   RQ++ G++   I ++   ++   +  +L+ +     SHV R+ LA L+G  P  + ++AR    L    PG          G  VPE     +  IV S    L +S   ++  +  +  + A  Q LL A    D+        S+V+ +    + + F        M+     S  +E ++ +L        Y AV    +G LA+      ANF +  ++  +     +     E+ P   +LL     R G+++AL                + S +R  G   +  + LA  L L S  +  E  R  V   S R   G++        VP         G L+ + L  FA    +   D++    S ELL    +P GSR++E +   T  + + K   R LK           ++A N + + V+ K  +   +  R+ +  +L +  E L     G++V+R CR+++Y++  DQW  +    E ++ LFSD++ E
Sbjct:   71 LVDNVLEEVGPKVACYL-DSESSRTLERIIQLTSDDQ-LTALTRYMVDLFP-KISD---HHNGSHVVQKVITLAHATAQRQLAQGDESGIISHIS-DMAKVLEGTLLNAMFDKYASHVIRALLALLSGADPAVQQQQARQKKGLSAVQPGPAHRGASAEAGAPVPEAFATRFYAIVESFLSTLADSPPEAIEQVCCDTYAAAVFQELLQAAQRLDRLAGPTSEASLVERLLTPLLGSGFSNISVVGGMLSGRVSSHVVECILTVLPESQYVPLYTAV---FRGHLADMIRDQSANFVVSHLISVIPTLPTLELILIEVTPFAEELLPH---RSGILVAL----------------SNSCVRLNGLFKEFNACLAKALNLRSMTDRKETIRRLVALPSSRSKEGIS--------VP---------GCLILQNLFLFAENQVRYLSDAIVNYESSELLDWCRHPSGSRVMEAFFNGTSPDAAKKRMTRKLKGH-------FASLAENRFASHVVDKIWRISDIPTRESIASELAARREDLANTPSGRLVLRNCRIDEYLKGKDQWVAQAESVERKKALFSDLLAE 600          
BLAST of Ggra5610.t1 vs. uniprot
Match: M2X7F8 (Pumilio/Puf RNA-binding domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X7F8_GALSU)

HSP 1 Score: 95.5 bits (236), Expect = 1.080e-16
Identity = 85/339 (25.07%), Postives = 160/339 (47.20%), Query Frame = 0
Query:  314 NFDRMIHDSCGSRFLERLILILGY----EAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENC----RRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNT-DELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAV-ARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDII 642
            NF +M   +  S  L+    IL Y    E    H + ++         N  LQ+++   K   +V+  +D+LEP +  L+  G    G++ AL     AEG  +C    ++   R V +A+   GK + +L   L   +E     + + + +   G+  ++  NT DEL+   + P    +G+L+ +  ++++    Q   +S       +LL +  +P GSR VE ++       SC N     +   +   TG+ ++ A+N  G  VL+K    + V  ++K++ +L ++   L    +G   + + +V +++RR +QW ++ET  E R+RLF DI+
Sbjct:  244 NFLKMACHAVTSHLLQAFFYILEYDLFQELFDNHLRNQIPYLLNDKYGNHVLQQIIRKQKDIPKVLDIYDKLEPHIDDLVSIGHF--GILAAL-----AEGLVSCEVGAQKTYVRKVAKALNCAGKTSCELVRNLLYPTETTRANFMH-IAEQIPGNFEISQNNTLDELQK--KVPKCSPVGSLLIQHFLKYSASGRQLVEESFVRFEKAQLLFIALDPSGSRAVESFLS------SCGNFSLLNRFIDKF--TGVYSILAKNCNGFHVLLKMFTVIDVKGKRKLVQELAATRLWLAYFPYGNQTLTRLKVNEFVRRQEQWSQKETTIENRKRLFKDIL 564          
BLAST of Ggra5610.t1 vs. uniprot
Match: I0YNR9 (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YNR9_COCSC)

HSP 1 Score: 89.7 bits (221), Expect = 9.880e-15
Identity = 158/669 (23.62%), Postives = 258/669 (38.57%), Query Frame = 0
Query:   39 SNSTPSSYFSGFTAAQENRLDNELESYLKKLQDELEALDPGAEIATKWQPHQSEDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVL---STFLQA----LLDCGP--DRVADMAMHRCASHVLQTSIHALRQISDGEKKSAIENL-GMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGLPDDEP---------------REARLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIGIRLLES--TSLSVADMLWEPASCAALQALLSALA----VTDKSVVKGIG----------QRAIEANF----------------DRMIHDSCGSRFLERLILI----LGYEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDIINESD 646
            S+  PS  F GF      RLD+E   Y  +++   ++L                D     LL  N L EL  +  ++  D   SR LEA++   ++ ++L   + F Q     +L   P   RVA+  + R     L  + H   Q S+      ++NL G+TV+      + +     + SHV R  L  +AG  D  P               R A+       KI           P    +++  I   LL    +   + ++L+   +C  LQ LLSA      + ++ V + +G          Q   + NF                  +  D   S FLE ++ +    L  +  +   +G LA  A HP ANF +Q  L  + G  QV +A  EL  ++P+LL RG+ R GVV ALL                     A G  G    Q    LA               DS    LG           P        LG  M   ++R          + +A L+  +LL + G+  GSR +E ++   D +   K   R ++  K  G  G LA   +P G+ V+  C +   V +++ +  +L ++ + +   +FGQ+++R+C VE + R +D W          +  F++++ + D
Sbjct:   97 SSGAPSETFGGF-----QRLDDETIKYFLEVKSHFDSL---------------VDPEERALLVGNVLEELPGKEVKVCTDATCSRILEAMIPSIREEQMLPLLAAFAQGEEFCMLASRPFGSRVAEQLLVRLGE--LLDNAHG--QESEDRLYEMLQNLTGVTVA-----HLWEFATDRNASHVARKMLCIIAGR-DVTPAQSAPAHSVDGAAFIRAAKQGGGLAAKIGGEAGGERLRPPARHPELLSQIAGDLLSDKWSGGRLEELLFHAYACPWLQTLLSAAEGSEDLLEQLVPRLLGAKPAQSQNQNQNPEDGNFGGEEQSPLEGVAADHVQGLAQDPTSSHFLEVVMRVSPERLLADIYQRFLRGALARLAMHPSANFVVQAYLAALHGSQQVKAALRELRDAMPELL-RGR-RSGVVAALL--------------------AAAGRTGNAAVQADSGLAASL---------LTHDSPAIKLG----------DPAGRARLSTLGCAMLGTVLRLPKEASADFAEGVADLSPAQLLHVGGDGGGSRALEAFL---DGDAGAKLKKRVIR--KLAGSYGKLA--GSPGGSHVVQTCFRVGGVKDKEAIAGELAAAEQHISSSKFGQILLRRCGVEDFKRSTDSWRTRAESAAVLRSKFAEMLGDGD 687          
BLAST of Ggra5610.t1 vs. uniprot
Match: pumilio homolog 23-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009012045 (pumilio homolog 23-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009012045)

HSP 1 Score: 87.8 bits (216), Expect = 3.710e-14
Identity = 139/632 (21.99%), Postives = 262/632 (41.46%), Query Frame = 0
Query:   48 SGFTAAQENRLDNELESYLKKLQDELEALDPGAEIATKWQPHQSEDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLR-CAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQTSIHALR-QISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGLPDDEPREA--------RLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDKSVVKGIGQRAIEANFD---------------RMIHDSCGSRFLERLILI----LGYEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEA--EGDENCRRRATRSVI---RAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLE---LLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWE-REETGKETRQRLFSDI 641
            + +T    N++D E E Y  ++ + +E    G EI          D     ++  NAL E   +  EL  D   S TL+ LL  C+ D   L  FL +   C  +  + +A  R  SHV +T++ +L   + D E+ S IE     +        +D++ +  GSHV RS L  L G+P ++            R++  +P    N +    +  P+    +++ +   +L +T   ++++L +      LQ  L  L V +++ +  I Q  +  N +               + + +   S   E +I +    +  E ++   K  L + + H   NF +Q +    K    +   W EL      LL  G  R GVV +L+  T+     +E C +    +V      +  I  +   L  +     +  W  W N  R                           ++G+L+ + + RF   P +  +  ++ +TSLE   LL  + +P GSR++E ++       S K+  + L   K  G  G L+V  +P G+ ++ KC    ++  R+K++ +++     L   + G  ++R+  V+ Y ++ D W+ R+ + +  RQ  +++ 
Sbjct:   83 TSYTPFVRNQIDPETEKYFAEITNVIE----GKEI----------DLEERSVICGNALEETRGKEVELATDYVISHTLQILLEGCSLDH--LCGFLHS---CAKN-FSHIATDRSGSHVAETALKSLAVHLQDCEQLSLIEETLRKICEEIIVNPVDIICNAYGSHVLRSLLCLLNGVPLEQFHSTKSAVVLAERMNFKAPRSEGNKLSYSNQSFPD----LLKYLVSEMLNTTREDISNLLMDQYCSLVLQTALKLL-VGNEAELLHIIQILLGCNMEMDGNFIGRPRLQEILKWVEEPAYSHLFEVIIEVAPEPIYKELLQRVFKNSLFQMSSHHCGNFVVQALASHAKCSEHIDLIWAELGTKFKDLLEMG--RSGVVASLVAATQKLHHCEEECCQALASAVCVENEPLMCIIPRILFLDNYFRSEDKSNWS-WPNGTRI-------------------------HVVGSLILQSIFRF---PSELIKAFISGITSLEEHQLLEASKDPSGSRVIEAFLNSNV---SAKHKRKLL--IKLQGHFGELSV--HPLGSFMIEKCFNASNLPLREKIISEMLPLQAELSRTKQGPYLLRRFDVDGYAKQPDIWKSRQASQQSARQEFYAEF 651          
BLAST of Ggra5610.t1 vs. uniprot
Match: A0A328DFQ3 (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DFQ3_9ASTE)

HSP 1 Score: 84.3 bits (207), Expect = 4.390e-13
Identity = 132/593 (22.26%), Postives = 253/593 (42.66%), Query Frame = 0
Query:   81 EIATKWQPHQSEDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLR-CAKDSEVLSTFLQALLDCGPDRVADMAMHRCASHVLQTSIHALR-QISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGSHVFRSTLATLAGLPDDEPREA--------RLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDKSVVKGIGQRAIEANFD---------------RMIHDSCGSRFLERLILI----LGYEAVKGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVLALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEKWRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQ---LLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLK---AAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLF 638
            EIA   +  + + E  S++   NAL E   + +EL  D   S TL+ LL  C+ D   L  FLQ+  +    + + +A  R  SHV +T++ +L   + + E+ S I++  + +        +DV+ +  GSHV RS L  L G+P +             R++   PG  EN +  + +  P+    +++ +   +L +T  +++++  +      LQ +L +L      ++  I Q  +  N D               + + +   SR +E +I +    L  E ++   K  L + +     NF +Q +    K    +   W+EL      LL  G  R GVV +L+  T+         R T                LA  +  G E        +++      L ++   + E R+ + +P+     ++G+L+ + + RF     Q+   S+ +L   +LL ++ +P GSR+VE ++          N    LK     K  G  G L+V  +  GA ++ KC    ++  R+ ++ +++     L   + G  ++ K  ++ Y R+ D W+  +  K++ ++ F
Sbjct:  103 EIANVIESKEIDIEERSIICG-NALEETRGKEAELATDYVISHTLQILLEGCSLD--YLCGFLQSCAE----KFSYIATDRSGSHVAETALKSLSVHLQESEELSFIKDTLLKLCEAIIINPVDVMCNCYGSHVLRSLLCLLNGMPLERSHGTKSATILAERMNFKVPGSDEN-MSYHSRGFPD----LLKYLVSEMLNATRENISNLSMDQHCSLVLQMVLKSLVGNMPELLNTI-QVILGCNIDMEGNLIESTTLEEIPQHVEEPSYSRLIEVIIEVAPDTLYNELLQRVFKTSLLQMSSQHCGNFVVQALASHTKCSEHIDLIWEELGTKFKDLLEMG--RSGVVASLIAATQ-----KLHHRETECC-----------QALASAVCEGDE--------SLKCIVPHILFVDNFFSSEDRLNWSWPTGSRIHVVGSLILQSIFRFPSECIQAFASSITSLEKDQLLVVSKDPSGSRVVEAFLNS--------NVSAKLKRKLVIKLQGHFGELSV--HHVGAFMIEKCFNTSNLSLRETIVSEMLPLRADLSRTKQGPYLLGKFDIDGYARQPDVWKTRQASKQSAKQEF 646          
BLAST of Ggra5610.t1 vs. uniprot
Match: L8H342 (Pumiliofamily RNA binding repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H342_ACACA)

HSP 1 Score: 84.3 bits (207), Expect = 4.640e-13
Identity = 132/653 (20.21%), Postives = 257/653 (39.36%), Query Frame = 0
Query:   58 LDNELESYLKKLQDELEALDPGAEIATKWQPHQSEDEPPSVLLARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVLS-------TFLQALLDCGPDRVADMAMHRCASHVLQTSIHALRQISDGEKKSAIENLGMTVSSWADEQILDVLRSPSGS--------HVFRSTLATLAGLPDDEPREARLDDSSPGKIENYIKTYGKEVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDKSVVKGI----------GQRAIEANFDRMIHDSCGSRFLERLILILGYEAV----KGHAKGKLAEFAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPS---VPQLLGRGKTREGVVL--ALLRITEA-EGDENCRRRATRSVIRAVG----AIGKKTSQLAG----------FLALGSEEMWE-----KWRNAVRDSQ-RGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGPGQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLKAAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALKGHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDIINESDEELVSRKKA 655
            +DNEL SYL+ ++  ++              ++ EDE    +L  N   EL  +   +   +  +RTLE  L      ++ +        +++   DC    + +  +      +      A  ++ DGE + A E +   V +     + D L    G+        HV R+ L  LAGLP  EP+  +  D               E  +E   ++ +I ++L +       D+++   +C  +Q +L+ L   D   ++ +             A   +  + +     S F+E+ + +   E          +  + E+     AN+ +Q+++   +   Q    ++EL  S   V  L   GK    + L  A  + T+  + D+     + R V    G    A+ +  S+ AG               S  +++     + ++ VRD+  +   G   K+      P+   SP  +G  + + LM F         +S   L +  LL +  +   SR+VE  +    L R+              G  G LAV R   G+ ++ KC +   V+ +  + D+LV   + L   ++G+ V+ KC++  Y  + + W  +    + ++++F DI+N+ D++L+   KA
Sbjct:    9 VDNELRSYLQHVKGIIDK-------------NEFEDEEERQILLNNVFSELRHKELNIATHSGVTRTLEGFLPLFSPYKLRAFLFHLRQRYVRLSTDCAGSHIFEKVIGLFGKFLGDEDADADEELDDGEGEEAKEKIPSCVDTLLG--VCDELAPELGALTTDNYSTHVVRTLLRVLAGLPPSEPKTEQEKDXXXXXXXXXXXXXXLEKAKE---VIEAILLQLQDDKH-QAQDIIFHRCACPTIQTILAVLKQLDPERMEALIAQMLMLDSKDSAATLKHVGKALRHPIASHFIEKALQLCSPETYVRIYSDFFRHNIVEYGKDASANYVVQQLIASARHHAQPKLIFEELMESPHNVKSLFNSGKASVMLKLVEAFTKFTDIPKKDKRALCTSIRDVFMVEGEQPAAVAEAESEAAGGKGAKXXXXXXXXXXSGRVFDLKGLLEVKSVVRDAPTKPAFGKKKKSGKRAVSPF---SP--IGCRLVQSLMLFPFDCVDFLLNSFLALDTEYLLTMGLDSAASRVVEHKL---KLIRTMH------------GVYGKLAVDR--CGSHIVEKCYKAADVNVKAMIADELVVDEKKLDAEKYGKAVLIKCKIGAYKMKKEAWTEKAASIDKKRKMFEDILNDQDDDLLPSAKA 620          
The following BLAST results are available for this feature:
BLAST of Ggra5610.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3IY068.420e-27860.80Pumilio-like n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QAI63.480e-19248.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1T9M31.510e-4226.69Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
W1NL734.230e-1724.50Uncharacterized protein n=2 Tax=Amborella trichopo... [more]
A0A058Z9H68.110e-1724.19Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
M2X7F81.080e-1625.07Pumilio/Puf RNA-binding domain-containing protein ... [more]
I0YNR99.880e-1523.62Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
pumilio homolog 23-like n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00090120453.710e-1421.99pumilio homolog 23-like n=3 Tax=Ipomoea TaxID=4119... [more]
A0A328DFQ34.390e-1322.26Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
L8H3424.640e-1320.21Pumiliofamily RNA binding repeat domain containing... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..679
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 736..750
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..750
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 107..143
e-value: 6.6
score: 14.2
coord: 310..345
e-value: 84.0
score: 5.8
coord: 555..590
e-value: 13.0
score: 12.0
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 107..143
score: 8.127287
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 100..391
e-value: 1.4E-14
score: 55.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 493..652
e-value: 1.7E-8
score: 35.9
IPR040000Nucleolar protein 9PANTHERPTHR13102NUCLEOLAR PROTEIN 9coord: 11..743
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 92..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1124032..1126284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5610.t1Ggra5610.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1124032..1126284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5610.t1 ID=Ggra5610.t1|Name=Ggra5610.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=751bp
MSAQTQKRFRKRGGAKKKKKIRDISEGADEQPLKPIHHSNSTPSSYFSGF
TAAQENRLDNELESYLKKLQDELEALDPGAEIATKWQPHQSEDEPPSVLL
ARNALRELSSRVSELVRDNYASRTLEALLRCAKDSEVLSTFLQALLDCGP
DRVADMAMHRCASHVLQTSIHALRQISDGEKKSAIENLGMTVSSWADEQI
LDVLRSPSGSHVFRSTLATLAGLPDDEPREARLDDSSPGKIENYIKTYGK
EVPEEWLQIVRSIGIRLLESTSLSVADMLWEPASCAALQALLSALAVTDK
SVVKGIGQRAIEANFDRMIHDSCGSRFLERLILILGYEAVKGHAKGKLAE
FAGHPKANFCLQRMLLGMKGRGQVMSAWDELEPSVPQLLGRGKTREGVVL
ALLRITEAEGDENCRRRATRSVIRAVGAIGKKTSQLAGFLALGSEEMWEK
WRNAVRDSQRGDLGLNGKNTDELRVPYRFPSPQLLGTLMARCLMRFAGGP
GQSARDSMATLTSLELLALTGNPVGSRLVEQWIGDTDLERSCKNAGRWLK
AAKECGDTGILAVARNPYGAMVLVKCVQHLSVDERKKVMDKLVSSVEALK
GHEFGQVVIRKCRVEQYMRRSDQWEREETGKETRQRLFSDIINESDEELV
SRKKARDVSNRHSHKRKRKREEANGLEESRAVRLVHAAKAASHISATNSG
SDESMADEAVQGVESNGSGLAPVLHAIESIAQSTKSKKKERKKTKRKALS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR040000NOP9
IPR016024ARM-type_fold