Ggra5608.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5608.t1
Unique NameGgra5608.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length604
Homology
BLAST of Ggra5608.t1 vs. uniprot
Match: A0A2V3IY93 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY93_9FLOR)

HSP 1 Score: 828 bits (2138), Expect = 7.220e-297
Identity = 446/604 (73.84%), Postives = 493/604 (81.62%), Query Frame = 0
Query:    1 MNQLCVPIPPASDTQQILEDVFALCRIPWIFEFIFNADPAADISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCVEQLARSKAKDGLQCIRFVRDDTNGVFLHVSENQRTGVTEVDCLTHKSSTRRTRVRMKFDCRSLRRVLRTPKGILHPSDISSSLIYYNVSDERRTCPVCADATAGDCGCKLPLQRPTHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMAVTDRLAKVKENPFSLVMPHGQPIAMNAAAQEAMADLGETVTDNVGVNVFDISSNDEHRMPAIEVNDMPEPLLVVPHATADVERMAEAAHTDMAQKTLASDSLFDRSADVANVDLEEANTLMDAHEVLGEMHNVCSSNANEDRSTRGDCTPPVEK-DRTTDCCTSSASVSSKPEMSCNNGDGQDIDSVPLQSIRDGYGNFRAFDGPCYEVTDEDAQLGCDTNHNFSGSVEAQLKRKRSRSEKEDDKADDGKPPRVLTEEEKTEIRKKRNREAAARSNLKRKLRNEKVRKDLANLTQKAIKLRVREMMLRDENTRLRNEVRRAKLLVPH 603
            MNQLCVPIPPASDTQQILEDVF LCRIPWIFEFIFNADPAADISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCVEQ ARSKAKD LQCIRFVRDDTNGVFLHVSEN+RTGVTEVDCLT KSSTRRTRVRMKFDCRSLRRVLRT  GILHPSDISSSLIYYNVSDERRTCPVC DATAG C CKLPLQRP+HPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMA+TDRL+KVKE+P +LVMPH     MN AA EA++ L E V DN  ++VFD + ++E RM + EV+DM EPLL   HA A+VERMA  AHTD+  K L  DSLF   ADV + DLE+A+TLMDA+EVLGEMHNVCSSN NE+ +  G+     EK D   D CTSS S+SSK  +S  N +G      P + +    G      G    + D+   L  +     S S++ Q   +R+R+++   + +D K  R++TEEE+ EIRKKRNREAAARSNLKRKLRNEKVRKDLANLTQ+A+KLRVREMMLRDENTRLRNEVRRAKLLVP+
Sbjct:    1 MNQLCVPIPPASDTQQILEDVFTLCRIPWIFEFIFNADPAADISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCVEQPARSKAKDDLQCIRFVRDDTNGVFLHVSENERTGVTEVDCLTQKSSTRRTRVRMKFDCRSLRRVLRTANGILHPSDISSSLIYYNVSDERRTCPVCCDATAGACNCKLPLQRPSHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMAMTDRLSKVKEHPMALVMPHATSALMNPAAHEALSALAEHVPDNGEIHVFDKTVHEEARMGS-EVHDMQEPLLGAQHAAAEVERMAHVAHTDICAKALVGDSLFGAEADVGSGDLEDADTLMDANEVLGEMHNVCSSNGNEEANVVGEDVGRAEKNDVAPDACTSSGSLSSKRGVSWMNSEGAQALVCPGEEVSGSKGVCERV-GVLEAIGDDGGALAGNVK---SESMDMQPTGRRARAKQSSVEKEDEKGQRIVTEEERVEIRKKRNREAAARSNLKRKLRNEKVRKDLANLTQRAVKLRVREMMLRDENTRLRNEVRRAKLLVPN 599          
BLAST of Ggra5608.t1 vs. uniprot
Match: R7Q910 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q910_CHOCR)

HSP 1 Score: 454 bits (1169), Expect = 3.050e-152
Identity = 249/412 (60.44%), Postives = 286/412 (69.42%), Query Frame = 0
Query:    1 MNQLCVPIPPASDTQQILEDVFALCRIPWIFEFIFNADPAADISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCVEQL--ARSKAKDGLQCIRFVRDDTNGVFLHVSENQRTGVTEVDCLTHKSSTRRTRVRMKFDCRSLRRVLRTPKGILHPSDISSSLIYYNVSDERRTCPVCADATAGDCGCKLPLQRPTHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMAVTDRLAKVKENPFSLVMPHGQPIAMNAAAQEAMADLGETVTDNVGVNVFDISSNDEHRMPAIEVNDMPEPLLVVPHATADVERMAEAAHTDMAQKTLASDSLFDRSADVANVDLEEANTLMDAHEVLGEMHNV 410
            MNQLCVP+P ASDT  IL++VF LCRIPWIF+FIF ADPAADISMLLAPVQKRHALSAR+ VNATETSSRYAHTFDF+KE MFYSIPAFS+  ITAGFCVEQ   A    +  LQCIRF+RDD+ G FLHVS+N+RT VTEVDCLT KSSTRRTRVRMKFD  SLR VLRTP+GILHP+D++ +LIY NVSDE+R+CPVC D TA  C C+L  +RP HP DF+FE SNM LYTGFYQGATVVRL S GH  INATLQSGSVIQGELN E T RLH++AV DRL KVKE P SLVMP   P+ ++A      AD  E                        EV  + E + + PH                  + L +D+LF   A  +   L+EA  LMD  E+L  M +V
Sbjct:    1 MNQLCVPVPSASDTHAILDEVFTLCRIPWIFDFIFRADPAADISMLLAPVQKRHALSARVHVNATETSSRYAHTFDFSKEFMFYSIPAFSIGPITAGFCVEQPVHAPKPPESALQCIRFIRDDSTGAFLHVSDNERTAVTEVDCLTQKSSTRRTRVRMKFDMHSLRTVLRTPRGILHPADVAPALIYLNVSDEKRSCPVCRDPTATHCSCQLLRRRPRHPLDFQFEESNMGLYTGFYQGATVVRLCSAGHRIINATLQSGSVIQGELNSETTTRLHKLAVMDRLGKVKERPSSLVMP-ASPLNLSAMLA---ADAPE------------------------EVEALVECVELRPHKP----------------EILDTDALFVNQAQTSRDGLDEAGNLMDTRELLVGMESV 368          
BLAST of Ggra5608.t1 vs. uniprot
Match: R7QC15 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC15_CHOCR)

HSP 1 Score: 136 bits (343), Expect = 1.620e-30
Identity = 146/597 (24.46%), Postives = 249/597 (41.71%), Query Frame = 0
Query:    8 IPPASDTQQILEDVFALCRIPWIFEFIFNADPAADISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCVEQLARSKAKD-----------GLQCIRFVRDDTNGVFLHVSENQRTGVTEVDCLTHKSSTRRTRVRMKFDCRSLRRVLRTPKGILHPSDISSSLIYYNVSDERRTCPVCADATAGDCGCKLPLQRPTHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMAVTDRLAKVKENPFSLVMPHGQPIAMNAAAQEAMADLGETVTDNVGVNVFDISSNDEHRMPAIEVNDMPEPLLVVPHATADVERMAEAAHTDMAQKTLASDSLFDRSADVANVDLEEANTLMDAHEVLGEMHNVCSSNANEDRSTRGDCTPPVEKDRTTDCCTSSASVSSKPEMSCNNGDGQDIDSVPLQSIRDGYGNFRAFDGPCYEVTD-EDAQLGCDT-NHNFSGSVEAQLKRKRSRSEKEDDKADDGKPPRVLTEEEKTEIRKKRNREAAARSNLKRKLRNEKVRKDLANLTQKAIKLRVREMMLRDENTRLR 591
            + PA      L + F LC +PW+ +F+FN +    + +L AP   R A+S  I +   E  S   + FD +   +   +PAFS+  I+ GF V++       D            L  +R+VRDD  G  +   ++  T + +V+ +   S+T R RV   FD    R  +        PS ++++L +   S E R CP CA   +  C C L L+ P+H  DF   A+NM  +TG ++G T   +++ G     A L     I G +  ++  RL R A++D+L   K  P +L+MP             +  D  ET  D V                 I+ +++ +    V  A + V         D+  K  +S S         ++D      + +            ++ A           PP     T D       ++ + ++S +  +  +  +   +S+  G         P   + D +   +G    N   + S   Q+ ++  +SEKE                 + ++RK+RNREAA RSN+KRK +N+ +++ L ++  +A +LR RE+   +EN  LR
Sbjct:   29 LTPAVHLGSELHEFFRLCALPWVSDFLFNEE-MDSLPVLTAPANMRSAISCTIQMTNVEAPSPGDNLFDTHLSGVALFVPAFSIASISVGFGVQECHLQSFSDWGTRSGLFDEPDLMHLRYVRDDATGALIIAYKDPHTNLFKVESMVQASTTTRRRVYAIFDLDHFRAAVNAEYCSFRPSLVANALKFLCSSVETRHCPKCAAPPSAACHCPLGLKLPSHSLDFSTVANNMVSFTGAFEGVTRSAVFNDGIELQAANLGCVINIDGCIGNDLIDRLSRWAISDQLTDKKGCPTALIMP------------PSGTDDAETTADMV-----------------IDTDNLAQ----VSAALSYVAPXXXXXXVDLFAKGTSSCSSGSGMLITESLDXXXXXXVPERAPPTASQIFETAAQA-----------PPPTAHGTLDFVDE---ITGQAQVSDSFFNPSEPSTPAEESMSSGSAGMSVI-APSAAIFDTQPVVIGATLRNKAIAPSAPVQVSKETMQSEKE----------------LRAQLRKQRNREAAQRSNMKRKFKNDTLKQALRDVHSRAAQLRARELXXXEENLELR 560          
BLAST of Ggra5608.t1 vs. uniprot
Match: A0A2V3IZC9 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZC9_9FLOR)

HSP 1 Score: 95.9 bits (237), Expect = 4.550e-17
Identity = 73/305 (23.93%), Postives = 134/305 (43.93%), Query Frame = 0
Query:    9 PPASDTQQILE---DVFALCRIPWIFEFIFNADPAADISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCVEQ----------LARSKAKDGLQCIRFVRDDTNGVFLHVSENQRTGVTEVDCLTHKSSTRRTRVRMKFDCRSLRRVLRTPKGILHPSDISSSLIYYNVSDERRTCPVCADA-TAGDCGCKLPLQRPTHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMAVTDRLAKVKENPFSLVMPHGQP 299
            PP+S +  +L    ++ A CR+P   +F+ N D    +S+L +P+ +  A  + + V A E S       D +   ++  IPAF++     GF + +            R    +     RF+R+D+  V L V ++    + + D +   +   R R  + F  RS  R L        P  ++  ++ +    +RR C VC +  TA  C C + + +P H  DF      M  + G ++G + + L + G    +A + S   I   ++  +  RL R A+T++L+   +NP   ++    P
Sbjct:   30 PPSSFSPSLLSVLAEILAPCRLPGALDFLLNPD-INPLSVLTSPINRHAACCSDVTVTAVEASDACPSDLDAHFNGIYAFIPAFNIADTQLGFGIRKCQMQCTGNTVFPRCGLAEQPSIFRFLRNDSAHVLLLVQDHVEP-IIKFDYMRLLNGATRRRHFVAFS-RSALRALHRSHSSFEPLQLAPHVVVFTSCTDRRHCTVCGNPPTAPPCFCVVNIPKPLHALDFDVMTPAMSAHLGSFEGLSSMNLCTQGVQVQSALMGSRMTITAHVDNHLLERLSRWAITEQLSNTPDNPLKDMLLSSSP 331          
BLAST of Ggra5608.t1 vs. uniprot
Match: R7QC61 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC61_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 3.650e-8
Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 0
Query:  536 KTEIRKKRNREAAARSNLKRKLRNEKVRKDLANLTQKAIKLRVREMMLRDENTRLRNEVRRAKLLV 601
            K E+RK+RNR AAARSN+KRK+RNE +R+DLA  +++A +LR  E +LR+EN RLR+   R KL V
Sbjct:  136 KAELRKQRNRAAAARSNVKRKVRNETLRRDLAAASRRAAQLRAVEKVLREENVRLRSLANRHKLRV 201          
The following BLAST results are available for this feature:
BLAST of Ggra5608.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IY937.220e-29773.84BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7Q9103.050e-15260.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QC151.620e-3024.46BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3IZC94.550e-1723.93BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QC613.650e-857.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 559..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..531
NoneNo IPR availableCDDcd14686bZIPcoord: 537..587
e-value: 7.8996E-8
score: 47.1549
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 534..597
score: 9.369527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1108641..1110452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5608.t1Ggra5608.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1108641..1110452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5608.t1 ID=Ggra5608.t1|Name=Ggra5608.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=604bp
MNQLCVPIPPASDTQQILEDVFALCRIPWIFEFIFNADPAADISMLLAPV
QKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGFCV
EQLARSKAKDGLQCIRFVRDDTNGVFLHVSENQRTGVTEVDCLTHKSSTR
RTRVRMKFDCRSLRRVLRTPKGILHPSDISSSLIYYNVSDERRTCPVCAD
ATAGDCGCKLPLQRPTHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGS
INATLQSGSVIQGELNPEITHRLHRMAVTDRLAKVKENPFSLVMPHGQPI
AMNAAAQEAMADLGETVTDNVGVNVFDISSNDEHRMPAIEVNDMPEPLLV
VPHATADVERMAEAAHTDMAQKTLASDSLFDRSADVANVDLEEANTLMDA
HEVLGEMHNVCSSNANEDRSTRGDCTPPVEKDRTTDCCTSSASVSSKPEM
SCNNGDGQDIDSVPLQSIRDGYGNFRAFDGPCYEVTDEDAQLGCDTNHNF
SGSVEAQLKRKRSRSEKEDDKADDGKPPRVLTEEEKTEIRKKRNREAAAR
SNLKRKLRNEKVRKDLANLTQKAIKLRVREMMLRDENTRLRNEVRRAKLL
VPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP