Ggra5606.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5606.t1
Unique NameGgra5606.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length567
Homology
BLAST of Ggra5606.t1 vs. uniprot
Match: A0A2V3IZC9 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZC9_9FLOR)

HSP 1 Score: 444 bits (1142), Expect = 1.190e-146
Identity = 262/593 (44.18%), Postives = 360/593 (60.71%), Query Frame = 0
Query:    3 SLFDGSVPSEYELSKILPLIPVSQPAA--PSLHEGLAELLAACRFPAALDFLINPEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSYAFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPVSSPGVFRFLRNDSAHVLVIVQDMGEPLVKIDYFRLVSGCERRRHYLVVTKSGLASLHRNHSSFEPYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVMGPGMSAHLGSYEGDAFVNFAFQGVRLHS-IVSNKMTISEVVNQDLIDRLSRCVISDELSKTPDSPLKDMLLRSSQIPMIASKDQST----------------------SKSGGSDTSMSSTSALLRAICDSHTRTSSVRSDPM----DEVHTQPCNPNNSSVLPNKSTCILNATNPQSYVPAEAESNEPWISPQIDGSVQESLANPITSQGLNNAPPAPMDEDLVLTDLIAGQAMNEFANESSTAPSSPMQRPELIAIAPSMQL-PISNISKPIAQEERERRAELRRQRNREAAQRSNLKRKIKNDTLKADLKKWHGKVTELRRIEVGLREENLKLRKLLSGG 565
            S F    P+  EL++++ L+P + P++  PSL   LAE+LA CR P ALDFL+NP+ +PLSVLTSP+NR+AA  S V ++ +E      + LD  F G YAFIPAF+IADTQLGFG+R+CQ    G +V   C     P +FRFLRNDSAHVL++VQD  EP++K DY RL++G  RRRH++  ++S L +LHR+HSSFEP QLAPHVV+    T+RR C +CGN P +PPC+CV+N+PK  HALDF VM P MSAHLGS+EG + +N   QGV++ S ++ ++MTI+  V+  L++RLSR  I+++LS TPD+PLKDMLL SS                                  + S     S S  +A+L  + ++   T +   D      + V  Q C  +N + L ++    L   +  + +P + E    W     D  +  S         L   PP  +D+ L LT L+   A ++   E++T P     RP+ + IAP+  + P+ N SK   QE +ER+AE+      EAAQRSNLKRK+KNDTLKA+LK+WH K TELR  E+GLREENL+LRK+LSGG
Sbjct:    7 SAFPPPFPTADELARLISLVPSTPPSSFSPSLLSVLAEILAPCRLPGALDFLLNPDINPLSVLTSPINRHAACCSDVTVTAVEASDACPSDLDAHFNGIYAFIPAFNIADTQLGFGIRKCQMQCTGNTVFPRCGLAEQPSIFRFLRNDSAHVLLLVQDHVEPIIKFDYMRLLNGATRRRHFVAFSRSALRALHRSHSSFEPLQLAPHVVVFTSCTDRRHCTVCGNPPTAPPCFCVVNIPKPLHALDFDVMTPAMSAHLGSFEGLSSMNLCTQGVQVQSALMGSRMTITAHVDNHLLERLSRWAITEQLSNTPDNPLKDMLLSSSPCSRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTSLPQTFSSSQMTAILHTLGEAQVSTITTLHDGKLQNSNTVLNQRCQTHNITDLVSQP---LQPNHDATIIPEQMEDVNQWQVNLFDLPLPLSATERYEKTPLQQPPPGVVDDQLQLTTLLVDDATDDSVRENATVPDDGSGRPKAVNIAPAGGIVPVDN-SKSKEQEHKERKAEMXXXXXXEAAQRSNLKRKMKNDTLKAELKRWHVKATELRNTELGLREENLRLRKMLSGG 595          
BLAST of Ggra5606.t1 vs. uniprot
Match: R7QC15 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC15_CHOCR)

HSP 1 Score: 188 bits (477), Expect = 5.750e-49
Identity = 182/587 (31.01%), Postives = 274/587 (46.68%), Query Frame = 0
Query:    5 FDGSVPSEYE---LSKILPLIPVSQPAAPSLHEG--LAELLAACRFPAALDFLINPEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSYAFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPV-SSPGVF--RFLRNDSAHVLVIV-QDMGEPLVKIDYFRLVSGCERRRHYLVVTKSGL-ASLHRNHSSFEPYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVMGPGMSAHLGSYEGDAFVNFAFQGVRLHSI-VSNKMTISEVVNQDLIDRLSRCVISDELSKTPDSPLKDMLLRSSQIPMIASKDQSTSKSGGSDT-SMSSTSALLRAIC--------DSHTRTSSVRSDPMDEVHTQPCNPNNSSVLPNKS--TCILNATNPQSYVPAEAESNEPWISPQIDGSVQ--ESLANPITSQGLNNAPPAPMDEDLVLTDLIAGQA-MNEFANESSTAPSSPMQRPELI---AIAPSMQLPISNISKPIAQEERERRAELRRQRNREAAQRSNLKRKIKNDTLKADLKKWHGKVTELRRIEVGLREENLKLRKLLS 563
            F  S PSE+E   L+ +    P S    P++H G  L E    C  P   DFL N E D L VLT+P N  +A++ T+ ++ +E      N  DT   G   F+PAFSIA   +GFGV+EC  H    S     + +   P +   R++R+D+   L+I  +D    L K++     S   RRR Y +       A+++  + SF P  +A  +     S E R CP C  +P S  C+C + +    H+LDFS +   M +  G++EG         G+ L +  +   + I   +  DLIDRLSR  ISD+L+     P   ++      P   + D  T+     DT +++  SA L  +         D   + +S  S     + T+  +      +P ++  T            P  A     ++  +I G  Q  +S  NP       + P  P +E +      +G A M+  A  ++   + P+     +   AIAPS  +    +SK   Q E+E RA+LR+QRNREAAQRSN+KRK KNDTLK  L+  H +  +LR  E+   EENL+LRKL+S
Sbjct:    3 FIASTPSEHEHAYLASLSAPAPASSALTPAVHLGSELHEFFRLCALPWVSDFLFNEEMDSLPVLTAPANMRSAISCTIQMTNVEAPSPGDNLFDTHLSGVALFVPAFSIASISVGFGVQEC--HLQSFSDWGTRSGLFDEPDLMHLRYVRDDATGALIIAYKDPHTNLFKVESMVQASTTTRRRVYAIFDLDHFRAAVNAEYCSFRPSLVANALKFLCSSVETRHCPKCA-APPSAACHCPLGLKLPSHSLDFSTVANNMVSFTGAFEGVTRSAVFNDGIELQAANLGCVINIDGCIGNDLIDRLSRWAISDQLTDKKGCPTALIM------PPSGTDDAETTADMVIDTDNLAQVSAALSYVAPXXXXXXVDLFAKGTSSCSSGSGMLITESLDXXXXXXVPERAPPTASQIFETAAQAPPPTAHGTLDFVD-EITGQAQVSDSFFNP-------SEPSTPAEESMS-----SGSAGMSVIAPSAAIFDTQPVVIGATLRNKAIAPSAPV---QVSKETMQSEKELRAQLRKQRNREAAQRSNMKRKFKNDTLKQALRDVHSRAAQLRARELXXXEENLELRKLMS 564          
BLAST of Ggra5606.t1 vs. uniprot
Match: A0A2V3IY12 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY12_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 1.560e-22
Identity = 137/530 (25.85%), Postives = 226/530 (42.64%), Query Frame = 0
Query:   50 DFLINPEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSYAFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPVSSPGVFRFLRNDSAHVLVIVQDMGEPLVKIDYFRLVSGCERRRHYLVVTKSGLASLHRNHSSFEPYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVMGPGMSAHLGSYEGDAFVNFAFQGVRL-HSIVSNKMTISEVVNQDLIDRLSRCVISDELSKTPDSPLKDMLLRSSQIPMIASKDQSTSKSGGSDTSMSSTSALLRAICDSHTRTSSVRSDPMDEVHTQPCNPNNSSV--LPNKSTCILNATNPQ-----------SYVPAEAESNEPWISPQIDGSVQESLANPITSQGLNNAPPAPMDEDLVLTDLIAGQAMNEFANESSTAPSSPMQRPELIAIAPSMQLPISN-ISKPIAQEE-RERRAELRRQRNREAAQRSNLKRKIKNDTLKADLKKWHGKVTELRRIEVGLREENLKLRKLLS 563
            +FL   E   LS L +P  + +A+A +   + ++P  +  N +   F G +   PAF+      GFGV     +    +   P T +++ G  RF++N      +++   G    +I+Y + VS   + R  +    S      +   S     + P V++ + S E R+CP C NS HS  C C +      H LD S       +  G+Y G + V    +G  +    + ++++ +     DL+DRL    IS        +P    L     +P     DQ           ++ T  +                D  D+      N  N+ V  LP    C L AT+             + +P   +S+    SP+I   +Q+  +N + S  ++ AP A + +                  +S ++   P Q P      PS   P S+ I K   +++ R+ +AELRR++NR AAQRSN+++K  ND+LK+ LK  H K+  LR  E+ LREEN++LR+LL 
Sbjct:   12 NFLFADEPIHLSYLANPQLKQSAIACSFNETKVDPTPSPQNSMSDRFAGDFFLTPAFTYNHITFGFGVMNNVFYP-AQAWNTPETAMNALGECRFVKNSKEGYNIVIAYYGTECSRIEYVKTVSTTTQARCVIGTKISSFRDATKG-GSCNVDAVFPTVLLLQTSFEHRDCPFC-NSDHSQ-CKCQLQFATPFHPLDHSSFLANTLSEFGNYMGVSHVTMYREGAAMCMGALGSRLSFAPSAEDDLVDRLRTLAISRHALIQDPAP---SLSIQQDVPEEPRSDQ-----------VNITDEIF---------------DQSDQQQLSQQNSTNAIVTDLP----CPLLATDLNFDADLEQVIDITMLPTFGDSSS-RTSPEI---LQDISSNGVASFDVSPAPVATVQQQ-----------------DSHSSRDQPSQPPTSCETQPSNTPPTSSSIGKATVKDQIRKLKAELRREKNRAAAQRSNMRKKALNDSLKSSLKTTHEKLDILRSKEMLLREENIRLRQLLG 483          
BLAST of Ggra5606.t1 vs. uniprot
Match: A0A2V3IWY4 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWY4_9FLOR)

HSP 1 Score: 106 bits (264), Expect = 1.360e-20
Identity = 131/535 (24.49%), Postives = 220/535 (41.12%), Query Frame = 0
Query:   39 LLAACRFPAALDFLINPEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSYAFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPVSSPGVFRFLRNDS-AHVLVIVQDMGEPLVKIDYFRLVSGCERRRHYLVVTKSGLASLHRNHSSFEPYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVMGPGMSAHLGSYEGDAFVNFAFQGVRLHSIVSNKMTISEV-VNQDLIDRLSRCVISDELSKTPDSPLKDMLLRSSQIPMIASKDQSTSKSGGSDTSMSSTSALLRAICDSHTRTSSVRSDPMDEVHTQPCNPNNSSVLPNKSTCILNATNPQSYVPAEAESNEP-WISPQIDGSVQESLANPI---TSQGLNNAPPA---PMDEDLVLTDLIAGQAMNEFANESSTAPSSPMQRPE-LIAIAPSMQLPISNISKPIAQEERERRAELRRQRNREAAQRSNLKRKIKNDTLKADLKKWHGKVTELRRIEVGLREENLKLRKLLS 563
            LL   + PA  +FL  PE   L  L  P   + AVA+ ++   +EP  N+ N L   +   +   P  ++     GF + +   +  G +       + S  V RF++ND   H + +         +++Y +L +  ++ R  + V      +L +N        + P +   + +TE R+CP C  +     CYC     K RH  D+     G  +  G ++G   +     GV++ S V     IS    + DL++RL R  ISD + K  ++     +  ++       +DQ+   S G    +             HT        P++++        N   L   S+    A + + + P   E  +    S QI  S+  S   P+   T    N        PM  DL+ T +   Q     A +++   S P+      +++        +  + P  ++ R  +AELRR++NR +AQRSN+K+K   D LK DL     K   LR  E+ LR ENL L+K +S
Sbjct:   38 LLRVLQDPAVSNFLFTPEPIELHHLAHPRLYDQAVANNMLEINVEPNANVHNSLSDQWNSKHFMFPTHTVDGNTYGFIISD-DIYMPGSAWGAANLKIESRAVTRFVKNDEDGHTVFVAYYEDWDTFRLEYSKLTTSTQQIRFLVAVQGKAFRALLKN-GVLSISAIVPLLAFMQMTTEYRKCPQCLRA--CGECYCAAPNIKPRHPFDYEAFKLGAMSRSGIFDGRTEMALFANGVKIRSGVLGSRYISNPSFDFDLVERLRRLAISDHVGK--EAARHSHIFSNAVGVASTGRDQNPFDSIGKPVQL-------------HT--------PLEDL-------GNEGALIQTSS----ANDAEVWAPLTEEGEQGIGASQQITPSILSSFLTPLEELTPSDENTQSSVVSDPMTTDLIDTSV---QLRQSNALDAAIMNSEPLSTESGSLSVDQDSGTKTAKTASPDKEQVRRLKAELRREKNRASAQRSNMKKKAVLDALKHDLATSREKADLLRSKELLLRRENLSLKKQIS 531          
BLAST of Ggra5606.t1 vs. uniprot
Match: A0A2V3IY93 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY93_9FLOR)

HSP 1 Score: 83.2 bits (204), Expect = 4.310e-13
Identity = 69/296 (23.31%), Postives = 127/296 (42.91%), Query Frame = 0
Query:   27 PAAPSLHEGLAELLAACRFPAALDFLIN--PEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSYAFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPVSSPGV--FRFLRNDSAHVLVIVQDMGEP-LVKIDYFRLVSGCERRRHYLVVTKSGLASLHRNHSSF-EPYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVMGPGMSAHLGSYEGDAFVNFAFQGV-RLHSIVSNKMTISEVVNQDLIDRLSRCVISDELSKTPDSPL 315
            P A    + L ++   CR P   +F+ N  P AD +S+L +PV +  A+++ + ++  E     ++  D      +  IPAFS+     GF             VE P    +   +   RF+R+D+  V + V +     + ++D     S   R R  +      L  + R  +    P  ++  ++ +  S ERR CP+C ++  +  C C + + +  H  DF      M  + G Y+G   V     G   +++ + +   I   +N ++  RL R  ++D LSK  + P+
Sbjct:    9 PPASDTQQILEDVFTLCRIPWIFEFIFNADPAAD-ISMLLAPVQKRHALSARIFVNATETSSRYAHTFDFNKELMFYSIPAFSVEHITAGF------------CVEQPARSKAKDDLQCIRFVRDDTNGVFLHVSENERTGVTEVDCLTQKSSTRRTRVRMKFDCRSLRRVLRTANGILHPSDISSSLIYYNVSDERRTCPVCCDAT-AGACNCKLPLQRPSHPFDFRFEASNMQLYTGFYQGATVVRLWSVGHGSINATLQSGSVIQGELNPEITHRLHRMAMTDRLSKVKEHPM 290          
BLAST of Ggra5606.t1 vs. uniprot
Match: A0A2V3IDE3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDE3_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 2.450e-10
Identity = 133/560 (23.75%), Postives = 224/560 (40.00%), Query Frame = 0
Query:   20 PLIPVSQPAAPSLHEGLAELLAACRFPAALDFLINPEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSYAFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPVSSPGVFRFLRNDSA-HVLVIVQDMGEPLVKIDYFRLVSGCERRRHYLVVTKSGLASLHRN--HSSFEPYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVMGPGMSAHLGSYEGDAFVNFAFQGVRLHSI-VSNKMTISEVVNQDLIDRLSRCVISDELSKTPDSPLKDMLLRSSQIPMIASKDQSTSKSGGSDTSMSSTSALLRAICDSHTRTSSVRSDPMDEVHTQPC--NPNNSSVLPNKSTCILNATNPQSYVPAEAESNEP--------WISPQIDGSVQESLANPITSQGLNNAPP---APMDEDLVLTDLIAGQAMNEFANESSTAPSSPMQRPELIAIAPSMQLPIS---NISKPIAQEERERRAELRRQRNREAAQRSNLKRKIKNDTLKADLKKWHGKVTELRRIEVGLREENLKLR 559
            P+ PV  P        LA L          DF+   +A  L +LT   +        + I T +     +N      R     +P+FS     +GFGV +  +     S    C       V +  R+DS   +  I  D    LV+I  + L S   R   + +  +       RN  H+SF    + P ++    + E R C  C N+  +P C C I   + +H LD       M+ + G + G A ++       + S   ++  ++S + + +    +    +         +PLK ++  ++     A + +  + +     S  + S L R I    +   +++ +  D   + P    P +S      ST  +NA    +     A S +P        +++   +  + +S  +    Q L   PP     M   +   D  + Q+ NE        PS+  +   ++A AP +Q P S     +K    E+R RR ELR+ RNRE+AQRSNLK+K++   LK +L +       LR  E  LREEN++LR
Sbjct:    4 PITPVPVPL-----PDLAHLFTILNHDWVWDFMFESDAHALEMLTFAASDKGTTLFDLSIQTEDTSDAYANSFAVHERHRALILPSFSNGAISVGFGVADRITS----STTFAC---KQRYVGKIARDDSTGSIFFIAIDPSLNLVEITTYSLFSPTCRAHTFSLYHQHKFMLALRNCRHTSFSNEAVGPSLIYFYEAIETRPCRAC-NTTDAPACSCSIAFIQKKHPLDSVAEISNMACYTGDFRGTARLSLHSNNATMFSSNYTSSSSLSFLQDYEKQREMIEWALKTLSEHHQVNPLKLIMAEAA-----AMRSRFVTATDTFLLSSITESILSRPIRFDDSANETLQREQADMASSSPVLIAPMHSMNDIEPSTG-MNAGFGTALAHLAALSTDPQVRHAMNTYLTANSNNLLCDSTESISIDQILQPQPPLQAVEMMSPITGNDSCSSQSANE-------RPSTANRTLPVLAPAPVVQSPSSFGAEATKNQIDEDRRRRLELRKARNRESAQRSNLKKKLQMQKLKNELAEAAKHEAGLRAQEKSLREENMRLR 537          
The following BLAST results are available for this feature:
BLAST of Ggra5606.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IZC91.190e-14644.18BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QC155.750e-4931.01BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3IY121.560e-2225.85BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IWY41.360e-2024.49BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IY934.310e-1323.31BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IDE32.450e-1023.75BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 497..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..524
NoneNo IPR availableCDDcd14686bZIPcoord: 512..555
e-value: 1.30029E-6
score: 43.6881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1103168..1104931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5606.t1Ggra5606.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1103168..1104931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5606.t1 ID=Ggra5606.t1|Name=Ggra5606.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=567bp
MASLFDGSVPSEYELSKILPLIPVSQPAAPSLHEGLAELLAACRFPAALD
FLINPEADPLSVLTSPVNRNAAVASTVVISTLEPQLNMSNPLDTVFRGSY
AFIPAFSIADTQLGFGVRECQSHEHGVSVEHPCTPVSSPGVFRFLRNDSA
HVLVIVQDMGEPLVKIDYFRLVSGCERRRHYLVVTKSGLASLHRNHSSFE
PYQLAPHVVMHRCSTERRECPMCGNSPHSPPCYCVINVPKARHALDFSVM
GPGMSAHLGSYEGDAFVNFAFQGVRLHSIVSNKMTISEVVNQDLIDRLSR
CVISDELSKTPDSPLKDMLLRSSQIPMIASKDQSTSKSGGSDTSMSSTSA
LLRAICDSHTRTSSVRSDPMDEVHTQPCNPNNSSVLPNKSTCILNATNPQ
SYVPAEAESNEPWISPQIDGSVQESLANPITSQGLNNAPPAPMDEDLVLT
DLIAGQAMNEFANESSTAPSSPMQRPELIAIAPSMQLPISNISKPIAQEE
RERRAELRRQRNREAAQRSNLKRKIKNDTLKADLKKWHGKVTELRRIEVG
LREENLKLRKLLSGGG*
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