Ggra5592.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A2V3IDF8 (DNA-directed RNA polymerases II, IV and V subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDF8_9FLOR) HSP 1 Score: 514 bits (1325), Expect = 1.090e-182 Identity = 246/314 (78.34%), Postives = 278/314 (88.54%), Query Frame = 0
Query: 1 MPFGRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGDD------TDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRVSNNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNPERFDFNAETTGAMTPNSALLMALDLLKKRVDNVMAHIH 308
MPFGR P L++KE++R +M+FSL GTDVSMANAIRRTMI+EVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENV+RFDYGFDCE+C+DYC+ CSVSF +QVH VR VTSKD+ C+N ET++WCH+VKP+HDSGDD +D GNGILIARLSSSQR+DI C+ARKGI KDHAKWSPMCTVSYRIVPPAVEL+LEKLNS+LE AK DLA YSQGLL+V+N LQYEEPFLKGRIGITPDTTRRAG+L T+AGGKPS+++RYN PERFDF AETTG+MTP ALLMALD+LKKRVDNVMAHIH
Sbjct: 1 MPFGRNPGLDIKESSRCYMNFSLNGTDVSMANAIRRTMIAEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVDRFDYGFDCEKCEDYCAYCSVSFQIQVHATGDTAVRNVTSKDIVCTNLETEEWCHDVKPVHDSGDDAETGADSDGGNGILIARLSSSQRLDIRCIARKGIAKDHAKWSPMCTVSYRIVPPAVELVLEKLNSLLEQDAKEDLAVYSQGLLKVTNGFLQYEEPFLKGRIGITPDTTRRAGQLATQAGGKPSDIVRYNPEPERFDFTAETTGSMTPRFALLMALDILKKRVDNVMAHIH 314
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A1X6PC39 (RPOLD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC39_PORUM) HSP 1 Score: 276 bits (705), Expect = 4.120e-88 Identity = 153/330 (46.36%), Postives = 200/330 (60.61%), Query Frame = 0
Query: 1 MPFGR-QPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETD-DWCHEVKPIHDSGD--------------------DTDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRV-SNNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNPERFDFNAETTGAMTPNSALLMALDLLKKRVDNVMAHI 307
MP R Q L+ R M F L TDVSMANA+RRTMI+EVPTMA+DLVT+ ENT+ LHDEYIAHR+GLIPL S + + Y DC CDD+C CSVS+ L V +V VTS+DL + D V P+HDSGD + GILI +L+ QR+ +A+KGIGK+HAKWSP+CTV++R PPAV +L +LN +L+ AK DL S G++ + + L+Y+ PFL GR IT D RRAGEL AGG SE++ + PERF+F+ ETTG + P L A+ +L+++V NV AH+
Sbjct: 1 MPNARDQVQLDSVTLGRNDMRFILRNTDVSMANALRRTMIAEVPTMAVDLVTIHENTTVLHDEYIAHRIGLIPLSSSAADGYVYSRDCVACDDFCGVCSVSYTLSVTNATDDDV-PVTSRDLVPAEVSPDAPQGDPVVPVHDSGDVLRDAAPSPSSPTGTVPASVSDAAAKGILIVKLARGQRLSFSAIAKKGIGKEHAKWSPVCTVAFRAEPPAVRFVLPRLNELLDAAAKADLLSLSLGVVALDAAGDLEYDGPFLAGRSAITADAVRRAGELAAAAGGAESEIVEFCEFPERFEFDIETTGVLPPTEVLTRAITVLREKVQNVSAHL 329
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A7S1ERC4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERC4_9RHOD) HSP 1 Score: 246 bits (628), Expect = 8.340e-77 Identity = 136/305 (44.59%), Postives = 195/305 (63.93%), Query Frame = 0
Query: 1 MPFGRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGDDTDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRVS--NNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNP---ERFDFNAETTGAMTPNSALLMALDLLKKRV 300
MP R LEV+ + FSL +D S+ANA+RR MI+EVPT+AI+LV+V N+S LHDE+I HRLGLIPL S V+ F+Y ++C+ CD+ C+ C V F + +H S +VT+ L + + C V PIH G++ G+GI+IA+L Q++ +H +ARKGIGK+HAKWSP+ T +YR V L L++LN++L+ AK++L K+S G L + ++ L+YEE F+ GR I+ D RR GEL+ +AG SEV+ ++N RFDF E+TGA TP L AL +L +R+
Sbjct: 1 MPNARFSALEVESVTSDEIRFSLNKSDASVANALRRVMIAEVPTLAIELVSVSFNSSPLHDEFIVHRLGLIPLNSNRVDAFNYAYECD-CDELCAKCCVEFSIDIHSVDSD--MSVTTHHLVNESKYLSEDCASVVPIH--GEELGDGSGIIIAKLKQGQKLKLHAIARKGIGKEHAKWSPVATATYRS-EAGVNLKLDRLNAVLDFNAKSELVKWSDGALTMDRRSDKLEYEEAFVLGRTSISADLVRRCGELLLDAGSHISEVLVVSANDGSGARFDFVVESTGARTPQDILRAALLILLERI 299
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A5J4YZ21 (DNA-directed RNA polymerases II, IV and V subunit 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ21_PORPP) HSP 1 Score: 235 bits (600), Expect = 2.130e-71 Identity = 133/315 (42.22%), Postives = 194/315 (61.59%), Query Frame = 0
Query: 1 MPFGRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDW--CHEVKPIH--------DSGDDTDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLR--VSNNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNPERFDFNAETTGAMTPNSALLMALDLLKKRVDNV 303
MP R P LE+ E + F L+ TD S+ANA+RR MI+EVPT+AIDLV + N+S LHDE+IAHRLG+IPL S+ +Y DCE C+D+C C+V F + V G TVTS+ L + D + V+P+H D D S +GI+IA+L + QRI + +ARKGIGK+HAKWSP+ TVSY+ P V L L++LN+ LE + +L K+S G L+ N L+Y++ F GR ++ D R+ GE++ + G PSEVI N++P RF+F E+TGA++ ++ A+ +L+ ++ +
Sbjct: 88 MPNARFPTLELSECTDESLKFVLSRTDASVANALRRVMIAEVPTIAIDLVNISFNSSPLHDEFIAHRLGMIPLVSDKAADMNYTRDCE-CEDFCDLCAVVFQMDVEGQVEGT--TVTSQHLQNVWFDPDTYPRASTVEPVHWSCGAEHPDPALDA-SASGIIIAKLKAGQRIKLEAIARKGIGKEHAKWSPVATVSYKS-EPVVSLRLDELNNRLEVAQRQELLKWSDGALKWDARTNKLEYDDAFKYGRTALSNDFVRKCGEMLVQVGSHPSEVILLNNDPSRFEFFVESTGAISAPVVVVNAISVLRNKLQEL 397
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A7S2ZVX0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZVX0_9RHOD) HSP 1 Score: 232 bits (592), Expect = 4.120e-71 Identity = 128/324 (39.51%), Postives = 191/324 (58.95%), Query Frame = 0
Query: 1 MPFGRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGDD-----------TDSGN----GILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRVS--NNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNPERFDFNAETTGAMTPNSALLMALDLLKKRVDNVMAHI 307
MP R P+++++ M F+L + S+ANA+RR MI+EVPTMAIDLV ++ NTS L DE++AHRLGLIPL S V++F+ DC++C D+C CS+ ++L V + + V SKDL + C VKP+ +SG+ +D G GI+I +L QRI C+A+KG GK+HAKWS TV +R P+V L+K+N L K DL KYS+G+L + + L+YEE F + R I+ DT ++AG+L G P E++ YN NP F+F ETTG +T A+++L +++++ ++
Sbjct: 1 MPNARLPDIKLERVTSSEMDFTLLNAETSIANALRRVMIAEVPTMAIDLVNMEVNTSPLFDEFVAHRLGLIPLSSHEVDQFNNTRDCDRCTDHCPYCSIEYVLDVSCD-NEDFLDVMSKDLINVYEKERPECASVKPVDNSGESEAHARMNQASKSDGGQRPPEGIVITKLRRGQRIKCTCIAKKGTGKEHAKWSAASTVRFR-TDPSVRFRLDKINDTLTKDEKIDLEKYSEGMLMYNPTTDALEYEECFQERRFAISTDTIKKAGDLAGLHGVHPHEIMVYNDNPTVFNFKCETTGVLTAKELFFKAIEVLMNKLNSIQGYL 322
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A7S1TMT8 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMT8_9RHOD) HSP 1 Score: 218 bits (554), Expect = 1.480e-65 Identity = 126/314 (40.13%), Postives = 188/314 (59.87%), Query Frame = 0
Query: 5 RQPNLEVKETNRF--HMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGD-----DTDSGN--GILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQG--LLRVSNNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNS--NPERFDFNAETTGAMTPNSALLMALDLLKKRVDNVMA 305
R P+L+V E + + F+LT TD S+ANA+RR MI+EVPT+AIDLV++ N+SALHDE++AHRLG+IPL+SE Y DC+ CD++C C+ + L V + VTS+ L E+ E+ P+HD+ D G ILIA+L QR+D+ C+ARKG+GK+HAKW P+ T S+R P AV L L++LN +L+ AK ++A +S G +LR ++L+++ F+ GR I+ D RR GEL+ + SEV+ + FDF E+TG ++ L A+ +L ++ + A
Sbjct: 6 RFPSLQVAELSADGRELRFALTRTDASVANALRRVMIAEVPTIAIDLVSISVNSSALHDEFLAHRLGMIPLFSERAVSMRYARDCD-CDEFCPQCAAMYRLAVSCSAAETELAVTSRHLEPVWPES----AEILPVHDASTAPTRLSVDGGERAAILIAKLRPGQRLDMTCIARKGLGKEHAKWIPVATASFRGAP-AVSLKLDRLNVLLDRAAKAEVAAWSDGALMLRRERDVLEFDPAFVAGRTSISADLVRRVGELLLDVNAHVSEVVEVGAADGGSSFDFVVESTGVLSAPDILRAAIRVLMDKLQGIDA 313
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A7S3EGI7 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGI7_9RHOD) HSP 1 Score: 216 bits (549), Expect = 1.280e-64 Identity = 122/297 (41.08%), Postives = 175/297 (58.92%), Query Frame = 0
Query: 1 MPFGRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGDD-----------TDSGN----GILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRVS--NNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNPERFDFNAETT 280
MP R P+++++ M F+L + S+ANA+RR MI+EVPTMAIDLV ++ NTS L DE++AHRLGLIPL S V++F+ DC++C D+C CS+ ++L V + + V SKDL + C VKP+ +SG+ +D G GI+I +L QRI C+A+KG GK+HAKWS TV +R P+V L+K+N L K DL KYS+G+L + + L+YEE F + R I+ DT ++AG+L G P E++ YN NP F+F E +
Sbjct: 1 MPNARLPDIKLERVTSSEMDFTLLNAETSIANALRRVMIAEVPTMAIDLVNMEVNTSPLFDEFVAHRLGLIPLSSHEVDQFNNTRDCDRCTDHCPYCSIEYVLDVSCD-NEDFLDVMSKDLINVYEKERPECASVKPVDNSGESEAHARMNQASKSDGGQRPPEGIVITKLRRGQRIKCTCIAKKGTGKEHAKWSAASTVRFR-TDPSVRFRLDKINDTLTKDEKIDLEKYSEGMLMYNPTTDALEYEECFQERRFAISTDTIKKAGDLAGLHGVHPHEIMVYNDNPTVFNFKCEVS 295
BLAST of Ggra5592.t1 vs. uniprot
Match: M2XXQ9 (DNA-directed RNA polymerase II subunit C n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXQ9_GALSU) HSP 1 Score: 210 bits (535), Expect = 1.260e-63 Identity = 113/256 (44.14%), Postives = 159/256 (62.11%), Query Frame = 0
Query: 1 MPFGRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGD------DTDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRVS--NNILQYEEPFLKGRIGITPDTTRR 248
MPF + P + + M F +T TD S+ANAIRR I++VPTMAIDL+ ++ NTS+LHDE +AHRLGLIPL S V+ F+Y DC C D+C +CSV+F L V + TVTS+DL +A V+P+H SG+ + + NGI++A+L+ QRI + +A+KG+GK+HAKWSP+CT+SY+ P+V+ L KLN++L AK L K S L + +N L YE F GRI + D ++
Sbjct: 1 MPFAKTPTIHINRQTFNEMDFIITDTDTSVANAIRRVAIAQVPTMAIDLIHMQVNTSSLHDELLAHRLGLIPLTSHRVDEFEYTRDCPYCSDHCLHCSVTFELDVQC--TEEAMTVTSQDLVNKSAHESQLAASVQPVHFSGEYNPTLSEENGLNGIVLAKLAKGQRIQLTAIAKKGVGKEHAKWSPVCTISYQ-TDPSVQFNLNKLNTLLSEEAKRALVKSSDECLAIDPKSNQLIYETAFTLGRISLPLDCVKK 253
BLAST of Ggra5592.t1 vs. uniprot
Match: A0A1R2BMG1 (RPOLD domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BMG1_9CILI) HSP 1 Score: 191 bits (484), Expect = 2.030e-55 Identity = 112/307 (36.48%), Postives = 179/307 (58.31%), Query Frame = 0
Query: 4 GRQPNLEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGDDTDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILE--KLNSMLENGAKNDLAKYSQG-LLRVSNNILQYEEPFLKGRIGITPDTTRRAGELITEAG----GKPSEVIRYNSNPERFDFNAETTGAMTPNSALLMALDLLKKRVDNV 303
R P +E+++ ++ M F+L+G D S+AN++RRTMI+EVPTMAIDLV ++ NTS+LHDE+IAHRLGLIPL SEN++ +++ +C+ C +C C+V F L+V G V VTS DL +EV+P D IL+ +L +Q IDI C ARKGIGK+HAKWSP+ T S++ P E+IL K+ ++++ K D + ++ + ++ +P + + R+ +IT++ ++R N ++F F E++GA+ P S L+ A LL +++++
Sbjct: 7 NRTPGIEIQKLSKEKMKFTLSGVDSSIANSLRRTMIAEVPTMAIDLVQIQINTSSLHDEFIAHRLGLIPLVSENIDEYEFPRNCK-CSGHCQCCAVQFRLKVK-NSEGGVLDVTSMDLR----RVSQSANEVRPA-------DIDGPILLLKLKKNQEIDITCNARKGIGKEHAKWSPVATCSFKYTP---EIILNTPKIETLMDLKDKQDFVNSCPAKVFNLNEDNIEIVKP---NKCMFCDECVRKGESMITKSSIAILNSLENIVRINQIKDKFVFKVESSGALKPESILMKAFTLLCTKLEDI 294
BLAST of Ggra5592.t1 vs. uniprot
Match: J7GAM7 (DNA-directed RNA polymerase II n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7GAM7_9CRYP) HSP 1 Score: 191 bits (484), Expect = 2.280e-55 Identity = 113/302 (37.42%), Postives = 175/302 (57.95%), Query Frame = 0
Query: 9 LEVKETNRFHMSFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEQCDDYCSNCSVSFMLQVHVPPSGNVRTVTSKDLTCSNAETDDWCHEVKPIHDSGD-DTDSGNGILIARLSSSQRIDIHCLARKGIGKDHAKWSPMCTVSYRIVPPAVELILEKLNSMLENGAKNDLAKYSQGLLRV--SNNILQYEEPFLKGRIGITPDTTRRAGELITEAGGKPSEVIRYNSNPERFDFNAETTGAMTPNSALLMALDLLKKRVDNVMAHI 307
L + + F SL D+S+ N++RR MI+E+PTMAIDL+ V+ N+S HDE++AHRLGLIPL+SE+ N+F Y +CE C+ +CS CSV+F L V R V S DL N + + V PIHDSG D ILI++LS QR+ + +A+KGIG +HAKWSP+ + + + + + LN M E K++L K +L+ SN L Y E K + ++ T+++ + + + P +VI+ N + F+ E+TGA+ P+ A+D+LKK+++ + H+
Sbjct: 6 LTIDSISNFETKISLKEIDISLINSLRRVMINEIPTMAIDLIFVEINSSIFHDEFLAHRLGLIPLFSESANQFRYTRECE-CEKFCSKCSVAFSLDVIA--KDKYRDVFSTDLIVLNPKESFFAKHVSPIHDSGTADFPRLEPILISKLSQGQRLKLIGVAKKGIGLEHAKWSPISIIRLKR-QNTIYININDLNFMTETKIKHELVKNFPEILKQNDSNQNLVYHE---KKKFSLSVLTSQKLIDFLIKKKIDPKKVIKINPDKINFEIYIESTGALKPDFIFQNAIDILKKKINIIGIHV 300 The following BLAST results are available for this feature:
BLAST of Ggra5592.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5592.t1 ID=Ggra5592.t1|Name=Ggra5592.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=309bpback to top |