Ggra5588.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5588.t1
Unique NameGgra5588.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length579
Homology
BLAST of Ggra5588.t1 vs. uniprot
Match: A0A2V3IDH3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDH3_9FLOR)

HSP 1 Score: 372 bits (956), Expect = 1.210e-118
Identity = 230/593 (38.79%), Postives = 342/593 (57.67%), Query Frame = 0
Query:    3 EEAGDLSLRRALSCLRYDWIYDFLFSEQSDMLRRALVDSAHFGGTYLVQTDGGETPLPPQANVNERGSMLFVCAAMHGPRSVGFEVVHKQHTLSDLRSENVYLSRIVRDDETGVLLSISQMDDLDLIEVSYCTIITPGCKEHAFLLFRKQEFLNMTEGSQHRFDERAARKAIAYRLFSTEWRQCPKCGSQSPSVCGCRMNLVPKESMFDNVREAENFLAHTGSHAGVAEV-SVFDKDSGDPIFSEMVKSRSEINVLSNLDEKKRLATWAMNHAINQKPLRLLHIVPETVIRESYSQPSQDVLFSK--ANISLDLGDALGVFEDVLSSPRVIKD-GTINLSSMWDDVVDIHEYGLHGGKRYRPSICAMEISNTEKDESGSNTTLAVEEDNGCESISALLERAIGDGGVGQTASSNDNVKPLLDEPTSNWDESKRDSNQTP--VVSQHSQQPLPQLQQXXXXXXXXXXXXXNNKRSDSISLTL-----TNTTTQATKTISKSSAWRQA-----VRIAPA--PYSVRTEHIDANQRKLELRKARNRASAQRSNLKKKLALQKLKDDLKSMSKREGELRGRERVLREENLKLRAAVC 577
            +E  D SLRR L CL++DWI+DF+F  Q  +L ++LV + H  G Y VQT   E P+   A+VNERG+MLFVCA   G  + GFE++H++ T S +   + Y++RIVRDD+ G+LLSI+Q+  L LIEVSYC ++TPG +EHAF+LF   +F  M      RFD  AA++A+ YR F++EWR CP C S++   CGC +NL  K S FD  RE  N  AH G++ G+A + S F   SG P+ S++ + RSE+  LS+  ++ +++ WA++   N+ P+ L  +       +S     Q  +  +  +  SLDLGD +G  +D L + R   D   + +S + D++  I +      +R R +IC  ++  T+   +G    L +E+++   SIS+L++RA+ + G G+     +++  +  +       +   S  T    V+ + +      ++                  D++ +       TN+    T  ++  S  R+      VRIAPA    S  +E +DA   KLELRKARNRASAQRSNLKKK+ALQKLKDDL SMS+RE +LR RER+LR+ENLKLRAAVC
Sbjct:    2 KETADHSLRRVLKCLQHDWIHDFVFHNQDQLLYQSLVQNVHLLGQYTVQTSS-ELPIASVADVNERGAMLFVCADTKGALTTGFEIMHREQTASKVLLHDRYITRIVRDDDLGILLSIAQLPGLPLIEVSYCALVTPGFREHAFILFHTDQFREMLNKYPDRFDHDAAKRAMQYRFFASEWRNCPNCASKNSHNCGCLLNLTRKSSPFDLAREITNLSAHGGAYDGIANITSAFIAPSGQPLHSKVCRMRSEVKALSDEAQRVKMSQWALSTLSNRNPVSLTRMRVAGDDCDSVQSIVQHGVLDECTSRFSLDLGDPVGAIDDFLGAVRGELDLNALRVSGILDELEKIEDSATQSKRRDRAAICWADVMGTD---AGGTALLNIEDEDVNSSISSLVDRALANDGAGEQQRCTESMYVMFAQGMMQSGGANVRSAATAQCTVASNVRSNAMHAEEAVARALSIAPTGGAGMGIDTLEVLTGNENGTNSVRVETGEVNVRSCSRKGSCTSPVRIAPARSAESGESEKVDARAVKLELRKARNRASAQRSNLKKKMALQKLKDDLSSMSQREQQLRERERLLRQENLKLRAAVC 590          
BLAST of Ggra5588.t1 vs. uniprot
Match: A0A2V3IG00 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG00_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 5.730e-72
Identity = 186/603 (30.85%), Postives = 289/603 (47.93%), Query Frame = 0
Query:   10 LRRALSCLRYDWIYDFLFSEQSDMLRRALVDSAHFGGTYLVQTDGGETPLPPQANVNERGSMLFVCAAMHGPRSVGFEVVHKQHTLSDLRSENVYLSRIVRDDETGVLLSISQMDDLDLIEVSYCTIITPGCKEHAFLLFRKQEFLNMTEGSQHRFDERAARKAIAYRLFSTEWRQCPKCGSQSPSVCGCRMNLVPKESMFDNVREAENFLAHTGSHAGVAEVSVFDKDSGDPIFSEMVKSRSEINVLSNLDEKKRLATWAMNHAINQKPLRLLHIVPETVIR--ESYSQPSQDVLFSKANISLDLGDALGVFEDVLSS------------------PRVIKDGTINLSSMWDDVVDIHEYG-----LHGGKRYRPSICAMEISNTEKDESGSNTTLAVEEDNGCESISA------LLERAIGDGGVGQTASSNDNVKPLLDEPTSNWDESKRDSNQTPVVSQHSQQPLPQLQQXXXXXXXXXXXXXNNKRSDSISLTLTNTTTQATKTISKSSAWRQAVRIAPAP---YSVRTEHIDANQRKLELRKARNRASAQRSNLKKKLALQKLKDDLKSMSKREGELRGRERVLREENLKLRAAVCR 578
            L  A + L+  W YDFLFS+   +L  ALV      GT+ + TD    PL    ++ E GSMLF+ A      + G+EV H+  +   + + + Y+SR++RDD    L ++++ D L L E+++C   TPG +  A L+FR   F +M      RFD RAAR A+     ++EWRQCP C S    +CGC +    K    D + +  + L H+G+  GV  +S++ +    P   +  ++RS I V S+ +++  LA WAM H    +P  LL +    V+    +  Q  + +  S  ++SLDL D L   + V  S                   + ++DG +      DD ++  E+G     LHG       + A+   +T  +       + +E   G   ++A      +      D    Q A+S++  +   D P S       D+ Q+       Q  +P +++                           T T +   +  +S   +AV IAPA       +   +DANQ K E RKARNRASAQRSNLKKK+A+QK+KD+L ++S++EG+LR RER LREEN+KLR+A+ R
Sbjct:    9 LPTAFAVLQQQWAYDFLFSDDEPLLHNALVHGDRVAGTFQLHTDP-TLPLSSPCDLAEEGSMLFLSAFNRDVYTAGYEVTHRAKSAQAMNTNHRYISRVIRDDAAAALFTVARHDHLQLTEITFCRPQTPGYRFQAMLMFRTDAFNDMLRKCPTRFDARAARDALVLSFCTSEWRQCPLCASFDSQMCGCALQNRLKHDALDRLHDYHSLLIHSGAFNGVVNISMYAQPGAPPFIQKSARARSFIGVNSDENKQHSLAAWAMQHVSQNRPFNLLRLSAPHVVHVPPAAEQNEERMCASTTHVSLDLDDPLSFLDHVDMSVIAHAGGDIAQQLGLGEASKHVQDGAL----FDDDALNDSEHGPSLQLLHGS-----DVNAVSFLSTGDEL--VEPVVCIEPPRGSSEMAASTCLEHMARAGTNDVDAQQVATSSNWTRQASDTPPST-----EDTVQSERAQVAHQVDVPLVRRALHVQAASYCD---------------GTATASGACVDGAS---RAVSIAPAMDGRVEDKLHMLDANQVKAERRKARNRASAQRSNLKKKVAVQKMKDELSALSEQEGKLRQRERQLREENMKLRSAIPR 576          
BLAST of Ggra5588.t1 vs. uniprot
Match: R7QB64 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB64_CHOCR)

HSP 1 Score: 133 bits (334), Expect = 2.640e-29
Identity = 156/640 (24.38%), Postives = 255/640 (39.84%), Query Frame = 0
Query:    4 EAGDLSLRRALSCLRYDWIYDFLFSEQS---DMLRRALVDSAHFGGTYLVQTDGGETPLPPQANVNERGSMLFVCAAMHGPRSVGFEVVHKQHTLSDLRSENVYLSRIVRDDETGVLLSISQMDDLDLIEVSYCTIITPGCKEHAFLLFRKQEFLNMTEGSQHRFDERAARKAIAYRLFSTEWRQCPKCGSQSP---SVCGCRMNLVPKESMFDNVREAENFLAHTGSHAGVAEVSVFDKDSGDPIFSEMVKSRSEINVLSNLDEKKRLATWAMNHAINQKPLRLLHIVPETVIRESYSQPSQDVLFSKANISLDLGDALGVFEDVLSSPRVIKDGTINLSSMWDDVVDIHEYGLHGGKRYR--PSICAMEISNTEKD-ESGSNTTLAVEEDNGCESISALLERAIGDGGVGQTASSNDNVKPLLDE--------------PTSNWDESKRDSNQTPVVSQHSQQP-------------LPQLQQXXXXXXXXXXXXXNNK--------RSDSISLTLTNTTTQATKTISKSSAWRQA--VRIAPAPY------------------------SVRTEHIDANQRKLELRKARNRASAQRSNLKKKLALQKLKDDLKSMSKREGELRGRERVLREENLKLR 573
            E  + ++ R  + L++DW+YDF F+ +    DMLR A    +       +       P      V E   +L + +   G  +VGF V  K  + S +   + Y+ R+ RDD TG  L IS+  +  + EVS+ T+++   +EH F LF+ + F  +    +  F+  A  + + Y   +TE R C  CG+++    + C C++ +  K    D   E ++   +TG++ GVA VS F   +G  +F+  + + S   + ++ D ++RLA WA+  A+   P+                          + ++  +G      E  +S    + D  + L+S+ D V+        G KR    P      I   + D +S  +       DN      +L E +  D       S  D + P   +              P   +        Q P V Q+  QP             L Q  +             + +        RS S  L+  +        I+ +S  RQ+  V +AP P                          +  + +D  ++K ELRKARNR SAQRSN K+KL +Q LK D+    + E  LR  E+ LREEN  LR
Sbjct:    2 ELTEAAMERVFAVLKHDWVYDFFFASRPHELDMLRHAATKGSATTAELDLTALADGVPHENALQVGEHHRLLLMPSFTTGSITVGFAVNEKIASSSTVVCSDKYIGRLARDDATGTCLFISENFNEHITEVSFYTLLSAAHREHIFSLFKAKPFHRIISRMREHFNTSALLRHMVYYYVATEARPCVHCGAETAHALATCNCKVVMPRKLHPLDTDAEYKSLQCYTGAYCGVATVSFFK--AGASVFTANLTTNSATTITADPDVQRRLAIWALCSAVKDSPI--------------------------SPLTFTMGSGASGGEKAVS----VLDSFL-LASIADSVLS------EGAKRANMSPDSEPTSIRLLQNDPDSNLDPDQMPSPDNATAPTLSLSESSEPDFLASPLLSQKDPMIPQTHDSGPHAVTTDSYPFPPEQQFPPDPVALTQMPQVFQYMSQPPHPPLPATLLPSSLHQTPRRYAPGHDPAAEARSERGGVNAKLDRSGSTILSGNSMDQGMGNAIAATSVERQSEPVPLAPMPLMQPMARFILPSQSLAAAAMSGGVSKILGDDLDERRKKAELRKARNRESAQRSNHKRKLRIQALKADIAEAMRIEKNLRATEKRLREENRSLR 602          
The following BLAST results are available for this feature:
BLAST of Ggra5588.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IDH31.210e-11838.79BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IG005.730e-7230.85BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QB642.640e-2924.38BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 541..561
NoneNo IPR availableCOILSCoilCoilcoord: 518..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..419
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 516..578
score: 8.542082

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1047487..1049223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5588.t1Ggra5588.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1047487..1049223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5588.t1 ID=Ggra5588.t1|Name=Ggra5588.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=579bp
MREEAGDLSLRRALSCLRYDWIYDFLFSEQSDMLRRALVDSAHFGGTYLV
QTDGGETPLPPQANVNERGSMLFVCAAMHGPRSVGFEVVHKQHTLSDLRS
ENVYLSRIVRDDETGVLLSISQMDDLDLIEVSYCTIITPGCKEHAFLLFR
KQEFLNMTEGSQHRFDERAARKAIAYRLFSTEWRQCPKCGSQSPSVCGCR
MNLVPKESMFDNVREAENFLAHTGSHAGVAEVSVFDKDSGDPIFSEMVKS
RSEINVLSNLDEKKRLATWAMNHAINQKPLRLLHIVPETVIRESYSQPSQ
DVLFSKANISLDLGDALGVFEDVLSSPRVIKDGTINLSSMWDDVVDIHEY
GLHGGKRYRPSICAMEISNTEKDESGSNTTLAVEEDNGCESISALLERAI
GDGGVGQTASSNDNVKPLLDEPTSNWDESKRDSNQTPVVSQHSQQPLPQL
QQQQQQQQTQQLTQLNNKRSDSISLTLTNTTTQATKTISKSSAWRQAVRI
APAPYSVRTEHIDANQRKLELRKARNRASAQRSNLKKKLALQKLKDDLKS
MSKREGELRGRERVLREENLKLRAAVCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP