Ggra5587.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5587.t1
Unique NameGgra5587.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length544
Homology
BLAST of Ggra5587.t1 vs. uniprot
Match: A0A2V3IDE3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDE3_9FLOR)

HSP 1 Score: 560 bits (1443), Expect = 3.220e-193
Identity = 305/547 (55.76%), Postives = 394/547 (72.03%), Query Frame = 0
Query:    3 PLSSSSAQLPNVEHLFQILKHDWVWQFFFESDQHRAEMFSLAVEDKFSMLFDLAIYTEDCGDSYANSFAVRERHRALILPSFSNGPITLGFGICDRVTSSSTLSCRQRYFGKVARDDSQGVVYFISTDVGLNLMEVTTYSMFSPTARQHVFSIFRLHQFMDAIQSIRHGSFCNEQVAASLVYFYEAFETRPCSVCNTADSALCTCALSFSTKKHPRDIATEINNMTVYLGNFKGAATLTLCSNESAVFSATYNSCSFLNFYQDPHIKRELIDWAMNFVIQQDEVNPLRLVMAEAAGMESRFVTPTDTFLLASIAESILSKPIHF---AQPTLPQQRLPM--SMPLADTSMETLMNTLEPSTGMAAGFGTAMTHVNALSQDPELQQLLSDQKSFNSNNLLSESSESMSFETLLQTTTAQQNTQVVHADTEKESSVSKESSVCSQCDNEMDSYPKRKLPVLAPAPTVQG-SLPGADMTKMQIDEERRKRVELRKARNRESAQRSNLRKKMQLKQLKDELEAAAAKEACLRAREKTLREENMRLRTAVMR 543
            P++     LP++ HLF IL HDWVW F FESD H  EM + A  DK + LFDL+I TED  D+YANSFAV ERHRALILPSFSNG I++GFG+ DR+TSS+T +C+QRY GK+ARDDS G ++FI+ D  LNL+E+TTYS+FSPT R H FS++  H+FM A+++ RH SF NE V  SL+YFYEA ETRPC  CNT D+  C+C+++F  KKHP D   EI+NM  Y G+F+G A L+L SN + +FS+ Y S S L+F QD   +RE+I+WA+  + +  +VNPL+L+MAEAA M SRFVT TDTFLL+SI ESILS+PI F   A  TL +++  M  S P+    M + MN +EPSTGM AGFGTA+ H+ ALS DP+++  ++   + NSNNLL +S+ES+S + +LQ     Q  +++       S ++   S  SQ  NE  S   R LPVLAPAP VQ  S  GA+ TK QIDE+RR+R+ELRKARNRESAQRSNL+KK+Q+++LK+EL  AA  EA LRA+EK+LREENMRLRTAVMR
Sbjct:    4 PITPVPVPLPDLAHLFTILNHDWVWDFMFESDAHALEMLTFAASDKGTTLFDLSIQTEDTSDAYANSFAVHERHRALILPSFSNGAISVGFGVADRITSSTTFACKQRYVGKIARDDSTGSIFFIAIDPSLNLVEITTYSLFSPTCRAHTFSLYHQHKFMLALRNCRHTSFSNEAVGPSLIYFYEAIETRPCRACNTTDAPACSCSIAFIQKKHPLDSVAEISNMACYTGDFRGTARLSLHSNNATMFSSNYTSSSSLSFLQDYEKQREMIEWALKTLSEHHQVNPLKLIMAEAAAMRSRFVTATDTFLLSSITESILSRPIRFDDSANETLQREQADMASSSPVLIAPMHS-MNDIEPSTGMNAGFGTALAHLAALSTDPQVRHAMNTYLTANSNNLLCDSTESISIDQILQPQPPLQAVEMM-------SPITGNDSCSSQSANERPSTANRTLPVLAPAPVVQSPSSFGAEATKNQIDEDRRRRLELRKARNRESAQRSNLKKKLQMQKLKNELAEAAKHEAGLRAQEKSLREENMRLRTAVMR 542          
BLAST of Ggra5587.t1 vs. uniprot
Match: R7QB64 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB64_CHOCR)

HSP 1 Score: 213 bits (543), Expect = 3.330e-58
Identity = 186/605 (30.74%), Postives = 283/605 (46.78%), Query Frame = 0
Query:   14 VEHLFQILKHDWVWQFFFESDQHRAEMFSLAVEDKFSMLFDLAIYTEDCGDSYANSFAVRERHRALILPSFSNGPITLGFGICDRVTSSSTLSCRQRYFGKVARDDSQGVVYFISTDVGLNLMEVTTYSMFSPTARQHVFSIFRLHQFMDAIQSIRHGSFCNEQVAASLVYFYEAFETRPCSVCNTADS---ALCTCALSFSTKKHPRDIATEINNMTVYLGNFKGAATLTLCSNESAVFSATYNSCSFLNFYQDPHIKRELIDWAMNFVIQQDEVNPLRLVMAEAAGMESRFVTPTDTFLLASIAESILSKPIHFAQPTLPQQRLPMSMPLADTSMETLMN----TLEPSTGMAAGFGTAMTHVNALSQDPEL--QQLLSDQKSF----NSNNLLSESSESMSFE--------------------------------TLLQTTTAQQNTQVVHADTEKESSVSKESSVCSQCD---------NEMD----------SYPKRKLPV-LAPAPTVQG---------SLPGADMT----KMQIDE--ERRKRVELRKARNRESAQRSNLRKKMQLKQLKDELEAAAAKEACLRAREKTLREENMRLR 538
            +E +F +LKHDWV+ FFF S  H  +M   A     +   +L +     G  + N+  V E HR L++PSF+ G IT+GF + +++ SSST+ C  +Y G++ARDD+ G   FIS +   ++ EV+ Y++ S   R+H+FS+F+   F   I  +R   F    +   +VY+Y A E RPC  C    +   A C C +    K HP D   E  ++  Y G + G AT++     ++VF+A   + S      DP ++R L  WA+   ++   ++PL   M   A    + V+  D+FLLASIA+S+LS+           +R  MS     TS+  L N     L+P    +    TA T   + S +P+     LLS +       + +   + +++S  F                                 TLL ++  Q   +          + S+   V ++ D         N MD          S  ++  PV LAP P +Q          SL  A M+    K+  D+  ERRK+ ELRKARNRESAQRSN ++K++++ LK ++  A   E  LRA EK LREEN  LR
Sbjct:    8 MERVFAVLKHDWVYDFFFASRPHELDMLRHAATKGSATTAELDLTALADGVPHENALQVGEHHRLLLMPSFTTGSITVGFAVNEKIASSSTVVCSDKYIGRLARDDATGTCLFISENFNEHITEVSFYTLLSAAHREHIFSLFKAKPFHRIISRMREH-FNTSALLRHMVYYYVATEARPCVHCGAETAHALATCNCKVVMPRKLHPLDTDAEYKSLQCYTGAYCGVATVSFFKAGASVFTANLTTNSATTITADPDVQRRLAIWALCSAVKDSPISPLTFTMGSGASGGEKAVSVLDSFLLASIADSVLSEGA---------KRANMSPDSEPTSIRLLQNDPDSNLDPDQMPSPDNATAPTLSLSESSEPDFLASPLLSQKDPMIPQTHDSGPHAVTTDSYPFPPEQQFPPDPVALTQMPQVFQYMSQPPHPPLPATLLPSSLHQTPRRYAPGHDPAAEARSERGGVNAKLDRSGSTILSGNSMDQGMGNAIAATSVERQSEPVPLAPMPLMQPMARFILPSQSLAAAAMSGGVSKILGDDLDERRKKAELRKARNRESAQRSNHKRKLRIQALKADIAEAMRIEKNLRATEKRLREENRSLR 602          
BLAST of Ggra5587.t1 vs. uniprot
Match: A0A2V3IG00 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG00_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 1.010e-21
Identity = 150/585 (25.64%), Postives = 247/585 (42.22%), Query Frame = 0
Query:   18 FQILKHDWVWQFFFESDQ---HRAEMFSLAVEDKFSMLFDLAIYTEDCGDSYANSFAVRERHRALILPSFSNGPITLGFGICDRVTSSSTLSCRQRYFGKVARDDSQGVVYFISTDVGLNLMEVTTYSMFSPTARQHVFSIFRLHQFMDAIQSIRHGSFCNEQVAASLVYFYEAFETRPCSVCNTADSALCTCALSFSTKKHPRDIATEINNMTVYLGNFKGAATLTLCSNESA--VFSATYNSCSFLNFYQDPHIKRELIDWAMNFVIQQDEVNPLRL-------VMAEAAGMESR-----------------FVTPTDTFLLA----SIAESI----LSKPIH----FAQPTLPQQRLPMSMPL---ADTSMETLMNT----------LEPSTG---MAAGFGTAMTHV-NALSQDPELQQLLSDQKSFNSNNLLSESSESM-SFETLLQTTTAQQNTQVVHADTEKESSVSKESSVCSQCDNEMDSYPKRKLPVLAPAPTVQGSLPGADMTKMQIDEERRKRVELRKARNRESAQRSNLRKKMQLKQLKDELEAAAAKEACLRAREKTLREENMRLRTAVMR 543
            F +L+  W + F F  D+   H A +    V   F +  D  +      D       + E    L L +F+    T G+ +  R  S+  ++   RY  +V RDD+   ++ ++    L L E+T     +P  R     +FR   F D ++      F       +LV  +   E R C +C + DS +C CAL    K    D   + +++ ++ G F G   +++ +   A      +  + SF+    D + +  L  WAM  V Q    N LRL       V   A   E R                 F+   D  ++A     IA+ +     SK +     F    L       S+ L   +D +  + ++T          +EP  G   MAA   T + H+  A + D + QQ+ +      S+N   ++S++  S E  +Q+  AQ   QV      +   V       S CD    +     +   + A ++  ++ G    K+ + +  + + E RKARNR SAQRSNL+KK+ ++++KDEL A + +E  LR RE+ LREENM+LR+A+ R
Sbjct:   13 FAVLQQQWAYDFLFSDDEPLLHNALVHGDRVAGTFQLHTDPTLPLSSPCD-------LAEEGSMLFLSAFNRDVYTAGYEVTHRAKSAQAMNTNHRYISRVIRDDAAAALFTVARHDHLQLTEITFCRPQTPGYRFQAMLMFRTDAFNDMLRKCP-TRFDARAARDALVLSFCTSEWRQCPLCASFDSQMCGCALQNRLKHDALDRLHDYHSLLIHSGAFNGVVNISMYAQPGAPPFIQKSARARSFIGVNSDENKQHSLAAWAMQHVSQNRPFNLLRLSAPHVVHVPPAAEQNEERMCASTTHVSLDLDDPLSFLDHVDMSVIAHAGGDIAQQLGLGEASKHVQDGALFDDDALNDSEHGPSLQLLHGSDVNAVSFLSTGDELVEPVVCIEPPRGSSEMAAS--TCLEHMARAGTNDVDAQQVAT------SSNWTRQASDTPPSTEDTVQSERAQVAHQVDVPLVRRALHV----QAASYCDGTATAS-GACVDGASRAVSIAPAMDGRVEDKLHMLDANQVKAERRKARNRASAQRSNLKKKVAVQKMKDELSALSEQEGKLRQRERQLREENMKLRSAIPR 576          
BLAST of Ggra5587.t1 vs. uniprot
Match: A0A2V3IDH3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDH3_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 8.160e-21
Identity = 142/600 (23.67%), Postives = 252/600 (42.00%), Query Frame = 0
Query:   13 NVEHLFQILKHDWVWQFFFESDQHRAEMFSLAVEDKFSMLFDLAIYTEDCGDSY--ANSFAVRERHRALILPSFSNGPITLGFGICDRVTSSSTLSCRQRYFGKVARDDSQGVVYFISTDVGLNLMEVTTYSMFSPTARQHVFSIFRLHQFMDAIQSIRHGSFCNEQVAASLVYFYEAFETRPCSVCNTADSALCTCALSFSTKKHPRDIATEINNMTVYLGNFKGAATLT---LCSNESAVFSATYNSCSFLNFYQDPHIKRELIDWAMNFVIQQDEVNPLRLVMAEAAGMESRFVTPTDTFLLASIAESILSK-------PIHFAQPTLPQQRLPMSMPLADTS-----METLMNTLEPST-------------GMAAGFGTAMTHVNALSQDPELQQLLSDQKSFNSNNLLSESSESM-----------------SFETLLQTTTAQQNTQVVHADTEKESSVSKESSVC---------------SQCDNEMDSYPKRKLPVLAPAPTVQGSLPG---------ADMTKMQIDEERRKRVELRKARNRESAQRSNLRKKMQLKQLKDELEAAAAKEACLRAREKTLREENMRLRTAV 541
            ++  + + L+HDW+  F F +         L  +     +  L  YT         A+   V ER   L + + + G +T GF I  R  ++S +    RY  ++ RDD  G++  I+   GL L+EV+  ++ +P  R+H F +F   QF + +       F ++    ++ Y + A E R C  C + +S  C C L+ + K  P D+A EI N++ + G + G A +T   +  +   + S      S +    D   + ++  WA++ +  +   NP+ L     AG +   V    + +   + +   S+       P+      L   R  + +     S     +E + ++   S              G  AG GTA+ ++     +  +  L+    + +        +ESM                 S  T   T  +   +  +HA    E +V++  S+                +  +N  +S       V   + + +GS            A+  + +  + R  ++ELRKARNR SAQRSNL+KKM L++LKD+L + + +E  LR RE+ LR+EN++LR AV
Sbjct:    8 SLRRVLKCLQHDWIHDFVFHNQDQ------LLYQSLVQNVHLLGQYTVQTSSELPIASVADVNERGAMLFVCADTKGALTTGFEIMHREQTASKVLLHDRYITRIVRDDDLGILLSIAQLPGLPLIEVSYCALVTPGFREHAFILFHTDQFREMLNKYP-DRFDHDAAKRAMQYRFFASEWRNCPNCASKNSHNCGCLLNLTRKSSPFDLAREITNLSAHGGAYDGIANITSAFIAPSGQPLHSKVCRMRSEVKALSDEAQRVKMSQWALSTLSNR---NPVSLTRMRVAGDDCDSV---QSIVQHGVLDECTSRFSLDLGDPVGAIDDFLGAVRGELDLNALRVSGILDELEKIEDSATQSKRRDRAAICWADVMGTDAG-GTALLNIEDEDVNSSISSLVDRALANDGAGEQQRCTESMYVMFAQGMMQSGGANVRSAATAQCTVASNVRSNAMHA----EEAVARALSIAPTGGAGMGIDTLEVLTGNENGTNSVRVETGEVNVRSCSRKGSCTSPVRIAPARSAESGESEKVDARAVKLELRKARNRASAQRSNLKKKMALQKLKDDLSSMSQREQQLRERERLLRQENLKLRAAV 589          
BLAST of Ggra5587.t1 vs. uniprot
Match: R7QC15 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC15_CHOCR)

HSP 1 Score: 98.2 bits (243), Expect = 5.550e-18
Identity = 147/590 (24.92%), Postives = 224/590 (37.97%), Query Frame = 0
Query:    3 PLSSSSAQLPNVE------HLFQILKHDWVWQFFFESDQHRAEMFSLAVEDKFSMLFDLAIYTEDCGDSYANSFAVRERHRALILPSFSNGPITLGFGICD-RVTSSSTLSCRQRYFG-------KVARDDSQGVVYFISTDVGLNLMEVTTYSMFSPTARQHVFSIFRLHQFMDAIQSIRHGSFCNEQVAASLVYFYEAFETRPCSVCNTADSALCTCALSFSTKKHPRDIATEINNMTVYLGNFKGAATLTLCSNESAVFSATYNSCSFLNFYQDPHIKRELID----WAMNFVIQQDEVNPLRLVM----AEAAGMESRFVTPTDTFLLASIAES---------------------------ILSKPIHFAQPTLPQQRLPMSMPLADTSMETLMNTLEPSTGMAAGFGTAMTHVNALSQDPELQQLLSDQKSFNSNNLLSESSESMSFETLLQTTTAQQNTQVVHADTEKESSVSKESSVCSQCDNEMDSYP-----KRKLPVLAPAPTVQGSLPGADMTKMQIDEERRKRVELRKARNRESAQRSNLRKKMQLKQLKDELEAAAAKEACLRAREKTLREENMRLR 538
            P  +SSA  P V         F++    WV  F F  +     + +     + ++   + +   +      N F       AL +P+FS   I++GFG+ +  + S S    R   F        +  RDD+ G +     D   NL +V +    S T R+ V++IF L  F  A+ +  + SF    VA +L +   + ETR C  C    SA C C L      H  D +T  NNM  + G F+G  T +   N+     A    C  +N   D  I  +LID    WA++  +   +  P  L+M     + A   +  V  TD     S A S                           ++++ +         +R P   P A    ET      P+      F   +T           Q  +SD   FN +   + + ESMS                         S S   SV +      D+ P       +   +AP+  VQ       ++K  +  E+  R +LRK RNRE+AQRSN+++K +   LK  L    ++ A LRARE    EEN+ LR
Sbjct:   22 PAPASSALTPAVHLGSELHEFFRLCALPWVSDFLFNEEMDSLPVLTAPANMRSAISCTIQMTNVEAPSPGDNLFDTHLSGVALFVPAFSIASISVGFGVQECHLQSFSDWGTRSGLFDEPDLMHLRYVRDDATGALIIAYKDPHTNLFKVESMVQASTTTRRRVYAIFDLDHFRAAVNA-EYCSFRPSLVANALKFLCSSVETRHCPKCAAPPSAACHCPLGLKLPSHSLDFSTVANNMVSFTGAFEGV-TRSAVFNDGIELQAANLGCV-INI--DGCIGNDLIDRLSRWAISDQLTDKKGCPTALIMPPSGTDDAETTADMVIDTDNLAQVSAALSYVAPXXXXXXVDLFAKGTSSCSSGSGMLITESLDXXXXXXVPERAP---PTASQIFETAAQAPPPTAHGTLDFVDEITG----------QAQVSD-SFFNPSEPSTPAEESMS-------------------------SGSAGMSVIAPSAAIFDTQPVVIGATLRNKAIAPSAPVQ-------VSKETMQSEKELRAQLRKQRNREAAQRSNMKRKFKNDTLKQALRDVHSRAAQLRARELXXXEENLELR 560          
The following BLAST results are available for this feature:
BLAST of Ggra5587.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IDE33.220e-19355.76BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QB643.330e-5830.74BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3IG001.010e-2125.64BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IDH38.160e-2123.67BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QC155.550e-1824.92BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 476..526
NoneNo IPR availableCDDcd14686bZIPcoord: 485..538
e-value: 1.80091E-8
score: 48.6957
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 483..540
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 476..543
e-value: 0.0019
score: 27.2
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 481..543
score: 9.300573

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1045328..1046959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5587.t1Ggra5587.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1045328..1046959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5587.t1 ID=Ggra5587.t1|Name=Ggra5587.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=544bp
MQPLSSSSAQLPNVEHLFQILKHDWVWQFFFESDQHRAEMFSLAVEDKFS
MLFDLAIYTEDCGDSYANSFAVRERHRALILPSFSNGPITLGFGICDRVT
SSSTLSCRQRYFGKVARDDSQGVVYFISTDVGLNLMEVTTYSMFSPTARQ
HVFSIFRLHQFMDAIQSIRHGSFCNEQVAASLVYFYEAFETRPCSVCNTA
DSALCTCALSFSTKKHPRDIATEINNMTVYLGNFKGAATLTLCSNESAVF
SATYNSCSFLNFYQDPHIKRELIDWAMNFVIQQDEVNPLRLVMAEAAGME
SRFVTPTDTFLLASIAESILSKPIHFAQPTLPQQRLPMSMPLADTSMETL
MNTLEPSTGMAAGFGTAMTHVNALSQDPELQQLLSDQKSFNSNNLLSESS
ESMSFETLLQTTTAQQNTQVVHADTEKESSVSKESSVCSQCDNEMDSYPK
RKLPVLAPAPTVQGSLPGADMTKMQIDEERRKRVELRKARNRESAQRSNL
RKKMQLKQLKDELEAAAAKEACLRAREKTLREENMRLRTAVMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP