Ggra5569.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5569.t1
Unique NameGgra5569.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Homology
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BLAST of Ggra5569.t1 vs. uniprot
Match: A0A2V3IWF1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWF1_9FLOR)

HSP 1 Score: 241 bits (615), Expect = 1.650e-76
Identity = 118/247 (47.77%), Postives = 170/247 (68.83%), Query Frame = 0 
Query:    4 NSPDKHPGKPINGYACLSPQLSEVLHATCRLAKSNSEALSFLGSSIRSMYDKVFEICREAGYVSADIQEILEDIDGINSVSPLESSPRLEDRVGFHQKVYGEEDSSNDPLPMSVWGREVYDEDVRMVDAIELNPCVEQRLTPLDVILDMKSADELGVRFKGDYKKEFGEKLGLSIRDERNPTNPDAVFCELQGDIVGAQVELYSVADEGWRSAVVSCKLPDGGHLLIFFDGIVERVMLREKLWRLVA 250
            +SP ++ GK I+ +  LSPQLS++LH  CRLA ++ +A+SFL SSIRSMYD +  ICR+ G V  D+++IL  ID   S+ PL+ SP+L +RV F ++   + D S       +    + +  V MVDA++LN   +  +  ++V++D    +++G++   D+K   GE+LG+ IRD+R   NP AV C+L GDI+G QVE++SVAD+ WRSAVVS KLPDG H+L++FDG+VERVMLREKLWR VA
Sbjct:   16 SSPRQNAGKSISKHTPLSPQLSQLLHTACRLAAAHPKAMSFLSSSIRSMYDNLCAICRDTGCVPPDVEDILHTIDTARSIPPLQPSPQLNNRVKFLEEACEDRDVSTFSKKHLLKEYRISNNGVEMVDAVQLNNLFDDDVDDMNVLVDSGDVEQIGIKLNADHKLFLGERLGIPIRDQRTSENPRAVLCDLTGDIIGEQVEVFSVADQTWRSAVVSYKLPDGRHVLVYFDGVVERVMLREKLWRPVA 262
The following BLAST results are available for this feature:
BLAST of Ggra5569.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IWF11.650e-7647.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:980650..981402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5569.t1Ggra5569.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 980650..981402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5569.t1 ID=Ggra5569.t1|Name=Ggra5569.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MQSNSPDKHPGKPINGYACLSPQLSEVLHATCRLAKSNSEALSFLGSSIR
SMYDKVFEICREAGYVSADIQEILEDIDGINSVSPLESSPRLEDRVGFHQ
KVYGEEDSSNDPLPMSVWGREVYDEDVRMVDAIELNPCVEQRLTPLDVIL
DMKSADELGVRFKGDYKKEFGEKLGLSIRDERNPTNPDAVFCELQGDIVG
AQVELYSVADEGWRSAVVSCKLPDGGHLLIFFDGIVERVMLREKLWRLVA
*
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