Ggra5563.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5563.t1
Unique NameGgra5563.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Homology
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A2V3IU57 (Carbonyl reductase [NADPH] 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU57_9FLOR)

HSP 1 Score: 223 bits (568), Expect = 1.300e-69
Identity = 111/177 (62.71%), Postives = 141/177 (79.66%), Query Frame = 0
Query:   13 TDLRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACKDGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHN 189
            TDLRGK ALITGGHRGIG  IS+ LA+ GADIIIIDRKGA  SDV  ICS+LGRKY A++AD+ N E+++R GE+AC++G+DI+VNNAG++I    E+++V DWD +MNVN+R+A LLSQI V+ A GM+AR++G I+N+SS SA+V L  H AYSCSKA M  LT QMAF  G+ N
Sbjct:    8 TDLRGKSALITGGHRGIGYAISVCLAKNGADIIIIDRKGALDSDVASICSQLGRKYRAYQADLGNAEQVQRVGEEACREGVDIVVNNAGVAIHNALEDVSVEDWDRSMNVNVRAALLLSQIAVKGARGMMARREGAIVNVSSSSAHVILPDHAAYSCSKAAMEHLTKQMAFHWGRSN 184          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A6B2LG63 (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG63_9EUKA)

HSP 1 Score: 173 bits (439), Expect = 1.020e-50
Identity = 91/193 (47.15%), Postives = 129/193 (66.84%), Query Frame = 0
Query:   21 LITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACKDGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWGGEK 213
            ++TG  +GIGRQIS+ LA+ GA ++ I R       + +   ++G+     +AD+ NVEE KRA  +A +  ID+LVNNAG+S +    +LTV DWD  +NVNLR+ F++SQI+   + GMI R+KG I+NISS ++ V L  H++Y  SK  ++QLT  M+ ELG+HNIRVN V PTVVLT+MG+  W   K
Sbjct:    1 MVTGAGKGIGRQISLDLAKNGAFVVAISRSTEDLKSLQEQIQQMGKTCKMIQADLGNVEECKRAATEAAQLDIDLLVNNAGISKMGLLVDLTVEDWDAVLNVNLRAVFIISQII---SKGMIKRRKGAIVNISSQASSVGLEKHSSYCASKGALDQLTRVMSLELGKHNIRVNAVNPTVVLTDMGKTAWSDPK 190          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A517VZM1 (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZM1_9PLAN)

HSP 1 Score: 169 bits (428), Expect = 7.120e-49
Identity = 102/213 (47.89%), Postives = 137/213 (64.32%), Query Frame = 0
Query:    9 SQSSTDLRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKL---GRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWGG-EKDE 215
            S S   ++GK AL+TG  RGIG +I+++LAQAGA+++I  R      D+  +C K+   G +  A  AD+ ++  ++   ++A +    IDILVNNAG   V PF E TV DWD    VNLR+ F+LS+I+   +  M A+K+G IINISSV+    L  H AYS SK G+NQLT  MA ELG  NI+ N VAPTV+LTE+G+KVWG  EK E
Sbjct:    4 SMSRFSVKGKTALVTGASRGIGAEIAMNLAQAGAEVLITAR---HHDDLIQVCEKIRSIGSRCEAIEADLISINGVEEVAQKAFEFFSTIDILVNNAGTIEVAPFWETTVEDWDQMQAVNLRAPFILSKIL---SEPMRAQKQGKIINISSVAGIAALAGHAAYSASKGGLNQLTKVMAAELGPFNIQCNAVAPTVILTELGQKVWGSPEKGE 210          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A3N5HDF8 (Glucose 1-dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5HDF8_9HYPH)

HSP 1 Score: 168 bits (425), Expect = 2.010e-48
Identity = 95/203 (46.80%), Postives = 129/203 (63.55%), Query Frame = 0
Query:   10 QSSTDLRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWG 210
            Q    L GKRAL+TG  +GIG +    LA AGADI  + R  A  +DV  + + +GR+ +   AD+A V+    A ++A      IDILVNNAG++++ P  +  VADWD+TM VNLR+ FLL++ +V    GMIA+K+G I+N+SS +  V L  H AY  SK G+N LT  M  E  +HNI++N V PTV+LT MG KVWG
Sbjct:    5 QKRFSLEGKRALVTGATKGIGFETCKVLADAGADIAAVGRDKAGLADVAAVVTSIGRRCVTIAADMATVDGPVTAAKEALDAFGTIDILVNNAGIALIDPLLDTKVADWDMTMAVNLRAPFLLAREIVP---GMIAQKRGKIVNVSSQAGVVGLEAHGAYCASKGGLNMLTKVMTVEWARHNIQINSVCPTVILTPMGEKVWG 204          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A7W0MMG9 (SDR family oxidoreductase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7W0MMG9_9RHOB)

HSP 1 Score: 158 bits (400), Expect = 1.150e-44
Identity = 90/200 (45.00%), Postives = 124/200 (62.00%), Query Frame = 0
Query:   15 LRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWGGE 212
            L G++AL+TG  +GIG +I    A AGADI+ + R     +   +    LGR+ L   AD+A VE  +RA  +A      IDILVN+A +++V P  E+ V DWD  M VNLR+ FLL+Q +   A GMIA++ G I+NISS +  + L  H AY+ SK G+N LT  +  E  +HN++VN + PTVV+T MGR VWG E
Sbjct:   10 LAGRKALVTGASKGIGAEICAVFADAGADIVAVARDAEGLAATAEAVRVLGRECLIIAADLATVEGPRRAAAEALAAWGTIDILVNDAAITVVAPALEMAVEDWDAIMAVNLRAPFLLAQAL---APGMIAQRWGKIVNISSQTGVIALDDHAAYASSKGGLNALTKSLMAEWARHNVQVNAICPTVVMTPMGRAVWGPE 206          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A2W2BIP4 (Short-chain dehydrogenase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BIP4_9HYPH)

HSP 1 Score: 157 bits (398), Expect = 2.300e-44
Identity = 91/198 (45.96%), Postives = 122/198 (61.62%), Query Frame = 0
Query:   15 LRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWG 210
            L+GK AL+TG  +GIG + +  LA AGADI  + R     ++V      +GR+ +A  AD+A  +   +A   A      IDILVNNAG++++   E+  VADWD TM VNLR+ FLL++ +V    GMI RK G IIN+SS +  V L  H AY  SK G+N LT  M  E  +HNI++N V PTV+LT MG +VWG
Sbjct:   10 LKGKHALVTGASKGIGLETAKVLADAGADIAAVGRDREGLAEVKAAVEAMGRRCVAISADMATADGPVKAAHDALAYFGAIDILVNNAGIALIDRLEDARVADWDATMAVNLRAPFLLARELVP---GMIERKGGKIINVSSQAGVVGLEGHAAYCASKGGLNMLTKVMTVEWAKHNIQINTVCPTVILTPMGEQVWG 204          
BLAST of Ggra5563.t1 vs. uniprot
Match: glucose 1-dehydrogenase n=1 Tax=Acuticoccus kandeliae TaxID=2073160 RepID=UPI001B3BF50A (glucose 1-dehydrogenase n=1 Tax=Acuticoccus kandeliae TaxID=2073160 RepID=UPI001B3BF50A)

HSP 1 Score: 157 bits (397), Expect = 2.530e-44
Identity = 86/201 (42.79%), Postives = 125/201 (62.19%), Query Frame = 0
Query:   15 LRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWGGEK 213
            + G++AL+TG  +GIG +I+   A AGADI+ + R   + +D        GR+ L   AD+A  E   R   +A      IDILVNNAG++ + P  +LTV DWD+TM VN+R+ FLL++ +   A GMIA++ G I+NISS +  + L  H AY+ SK  +N LT  +  E  QHN++VN + PTVV+T MG++VW  E+
Sbjct:    1 MEGRKALVTGASKGIGAEIARVFADAGADIVAVGRNEGELADTAAAVRVHGRECLTLVADLAEPEAPARVAAEALAAWGTIDILVNNAGIARIAPAMDLTVEDWDLTMAVNVRAPFLLARAL---APGMIAQRWGKIVNISSQTGVIALPEHAAYAASKGALNALTKSLTAEWAQHNVQVNAICPTVVMTPMGKQVWSAEE 198          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A7X2D5R1 (D-threitol dehydrogenase n=3 Tax=root TaxID=1 RepID=A0A7X2D5R1_9FIRM)

HSP 1 Score: 157 bits (397), Expect = 3.070e-44
Identity = 87/197 (44.16%), Postives = 124/197 (62.94%), Query Frame = 0
Query:   15 LRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVW 209
            L GK A++TG  RGIGR+I++  A +GA +I++D    +     +   ++GRK L+  AD++N +E+KR         D IDILVNNAG+    P  ++T   WD T+NVNL+  F LSQ V R+   MI  ++G IINI+S +  + L +H AYS SKAG+  +T  +A E G+ NI VN +APTV+LT +GRK W
Sbjct:    8 LEGKIAVVTGAARGIGREIALVFAHSGAHLILVDVLKKELMKTAEEVDRIGRKNLSIAADISNTKEIKRLTRDVLNEFDRIDILVNNAGVVDNNPATKVTEEQWDKTLNVNLKGLFFLSQAVGRH---MIKERRGKIINIASQAGVIALDNHAAYSASKAGIISITKTLALEWGKFNINVNAIAPTVILTPLGRKAW 201          
BLAST of Ggra5563.t1 vs. uniprot
Match: glucose 1-dehydrogenase n=1 Tax=Rhodobacter sp. Har01 TaxID=2883999 RepID=UPI001D05FA13 (glucose 1-dehydrogenase n=1 Tax=Rhodobacter sp. Har01 TaxID=2883999 RepID=UPI001D05FA13)

HSP 1 Score: 157 bits (397), Expect = 3.150e-44
Identity = 91/203 (44.83%), Postives = 127/203 (62.56%), Query Frame = 0
Query:   10 QSSTDLRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWG 210
            Q    L G++AL+TG  +GIG +I    A+AGADI+ + R  A   +V       GR+ L   AD+A  E   +A +QA      IDILVN+AG++ + P  +LT+A WD TM VNLR+ FLL+Q +   A  MIA+++G +INISS +  + L  H AY+ SK G+N LT  +  E  +HNI+VN + PTVV+T MGR+VWG
Sbjct:    4 QDRFSLAGRKALVTGASKGIGAEICAVFAEAGADIVAVARDRAGLDEVAAQVRGHGRQCLVIEADMATPEGPIQAAQQALAAWGTIDILVNSAGVARIAPALDLTLAQWDETMAVNLRAPFLLAQAL---APAMIAQRRGKVINISSQTGVIALDDHAAYATSKGGLNALTKSLCAEWARHNIQVNAICPTVVMTPMGRQVWG 203          
BLAST of Ggra5563.t1 vs. uniprot
Match: A0A847ZTR7 (Glucose 1-dehydrogenase n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZTR7_9HYPH)

HSP 1 Score: 157 bits (396), Expect = 4.580e-44
Identity = 91/205 (44.39%), Postives = 126/205 (61.46%), Query Frame = 0
Query:    8 QSQSSTDLRGKRALITGGHRGIGRQISISLAQAGADIIIIDRKGAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACK--DGIDILVNNAGMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVIINISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVVLTEMGRKVWG 210
            Q +    L G+ AL+TG  +GIG +    LA AGADI  + R  A   +V    S  GR+ +   AD+A+ +    AG++A K    +DILVNNAG++++    + + ADWD TM VNLR+ FLL++ VV    GMI +K+G +INISS +  V L  H AY+ SK G+N LT  M  E  +HNI++N V PTV+LT MG +VWG
Sbjct:    3 QWEKRFSLAGRTALVTGATKGIGLEACKVLADAGADIAAVGRDAAGLKEVAAAVSAAGRRCVTITADMASEDGPVSAGKEAIKAFGTVDILVNNAGVALIDQLLDASAADWDRTMAVNLRAPFLLARTVVP---GMIKQKRGKVINISSQAGVVGLEAHGAYAASKGGLNMLTKVMTVEWAKHNIQINSVCPTVILTPMGEQVWG 204          
The following BLAST results are available for this feature:
BLAST of Ggra5563.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU571.300e-6962.71Carbonyl reductase [NADPH] 2 n=1 Tax=Gracilariopsi... [more]
A0A6B2LG631.020e-5047.15Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A517VZM17.120e-4947.893-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A0A3N5HDF82.010e-4846.80Glucose 1-dehydrogenase n=1 Tax=Hyphomicrobiales b... [more]
A0A7W0MMG91.150e-4445.00SDR family oxidoreductase n=1 Tax=Rhodobacteraceae... [more]
A0A2W2BIP42.300e-4445.96Short-chain dehydrogenase n=1 Tax=Aestuariivirga l... [more]
glucose 1-dehydrogenase n=1 Tax=Acuticoccus kandeliae TaxID=2073160 RepID=UPI001B3BF50A2.530e-4442.79glucose 1-dehydrogenase n=1 Tax=Acuticoccus kandel... [more]
A0A7X2D5R13.070e-4444.16D-threitol dehydrogenase n=3 Tax=root TaxID=1 RepI... [more]
glucose 1-dehydrogenase n=1 Tax=Rhodobacter sp. Har01 TaxID=2883999 RepID=UPI001D05FA133.150e-4444.83glucose 1-dehydrogenase n=1 Tax=Rhodobacter sp. Ha... [more]
A0A847ZTR74.580e-4444.39Glucose 1-dehydrogenase n=1 Tax=Phyllobacteriaceae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 167..186
score: 35.48
coord: 91..102
score: 54.35
coord: 147..155
score: 64.62
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 188..205
score: 42.3
coord: 19..36
score: 43.46
coord: 141..157
score: 37.83
coord: 91..102
score: 54.91
coord: 167..186
score: 37.21
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 18..208
e-value: 6.5E-53
score: 179.1
NoneNo IPR availableGENE3D3.40.50.720coord: 1..216
e-value: 2.6E-60
score: 205.8
NoneNo IPR availablePIRSRPIRSR000094-3PIRSR000094-3coord: 14..200
e-value: 1.9E-11
score: 40.1
NoneNo IPR availablePIRSRPIRSR000095-1PIRSR000095-1coord: 21..215
e-value: 6.1E-21
score: 71.4
NoneNo IPR availablePANTHERPTHR44252D-ERYTHRULOSE REDUCTASEcoord: 13..213
NoneNo IPR availablePANTHERPTHR44252:SF3D-ERYTHRULOSE REDUCTASEcoord: 13..213
NoneNo IPR availableCDDcd05233SDR_ccoord: 20..216
e-value: 3.19899E-62
score: 191.728
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 154..182
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 16..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:947197..947847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5563.t1Ggra5563.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 947197..947847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5563.t1 ID=Ggra5563.t1|Name=Ggra5563.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MSDTIQQQSQSSTDLRGKRALITGGHRGIGRQISISLAQAGADIIIIDRK
GAQGSDVPDICSKLGRKYLAFRADVANVEELKRAGEQACKDGIDILVNNA
GMSIVKPFEELTVADWDITMNVNLRSAFLLSQIVVRNANGMIARKKGVII
NISSVSAYVPLLHHTAYSCSKAGMNQLTIQMAFELGQHNIRVNGVAPTVV
LTEMGRKVWGGEKDEK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf