Ggra5545.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A2V3IKJ4 (DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKJ4_9FLOR) HSP 1 Score: 394 bits (1013), Expect = 7.100e-132 Identity = 203/322 (63.04%), Postives = 240/322 (74.53%), Query Frame = 0
Query: 21 RSRKRLRNSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREKDAQFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSSGQVCVAMAYQGYRKGIQ--------------------------------YVLAGRREQAIAEELFLSHVKGLPIAGVSPQKAWKEYTNAGRDRIATDKVMRTARSKRQARWVDERLKADGTFRGRKRQLMI 310
R+RK LR SPVDL +GTPGS+ MR +QLLY+SRVSTIVLDEADELVS AGFG QL GLMS LRE++A FV + ATVP ME L+RWH GN+EV S+LHRAT S RVKTTF+RVDG+EDAKL+KLI++FSVA+ R +GK+LIFCDNV+R +AI++ LR++GTDVVHLSGEGRD+DDR DW AF GQV VA+ + + +GI Y+L RREQ IAE+LFL+HVKGLPIAGVSPQKAWK YT AGRDRIATDKV++ ARSKR ARWVDER ADGTFRGRKRQ+ +
Sbjct: 167 RARKLLRESPVDLFVGTPGSVATMREQQLLYISRVSTIVLDEADELVSPAAGFGDQLAGLMSTLRERNAHFVYAAATVPTAMETGLQRWHDGNIEVVRSSKLHRATPSSRVKTTFVRVDGAEDAKLRKLIDIFSVAKHRANSGKVLIFCDNVQRREAIMQTLRARGTDVVHLSGEGRDRDDRYTDWNAFVDGQVSVAVCSKSFGRGIDDHQIRTVIMFDVPMTGSEYLHRIGRIRGTGRAYILVSRREQPIAEDLFLAHVKGLPIAGVSPQKAWKGYTGAGRDRIATDKVVKIARSKRYARWVDERASADGTFRGRKRQISV 488
BLAST of Ggra5545.t1 vs. uniprot
Match: R7Q761 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q761_CHOCR) HSP 1 Score: 216 bits (550), Expect = 4.100e-62 Identity = 126/320 (39.38%), Postives = 187/320 (58.44%), Query Frame = 0
Query: 23 RKRLRNSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREK-DAQFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFS-VAQKRTKAGKILIFCDNVKRGQAIVRELRSK-GTDVVHLSGEGRDKDDRSADWEAF-----SSGQVCVAMAYQGYRKGIQ--------------------------------YVLAGRREQAIAEELFLSHVKGLPIAGVSPQKAWKEYTNAGRDRIATDKVMRTARSKRQARWVDERLKADGTFR 302
++ LR +PVD+++GTPG++ + +++L+Y+S+V +V+DEAD L++ GF Q ++ L +K D QFV +GATVP ++ +E+ + H G LEV G R H+A +KTTFIRVDG E+AKL K +E+ V +++ A ++L+FCD +R + +V LR G +VVHL G D DR DW++F + Q VA+ + + +G+ +VL G REQA+AE LFL HVKG + + P+ AWK YT AG+DRI T+ ++ AR K QARWVDER A G+ R
Sbjct: 168 KRALREAPVDVLVGTPGAVNNLIDQKLIYLSKVQAVVVDEADALLAEKGGFADQTLPIVDSLGKKEDVQFVYAGATVPGSVREEIEKRHDG-LEVVKGKRFHKALGPADLKTTFIRVDGGEEAKLAKAVEIAGRVLRQKGGADRLLVFCDERERRERLVDLLREHVGENVVHLCGRN-DYQDRERDWDSFLGTKTNGEQTRVAVCAKSFGRGLDHHGIGTVLLVDVPWTGSEYLHRVGRIRGSGKAFVLVGNREQAVAEALFLGHVKGESLDSIQPRSAWKGYTTAGKDRITTEPMVNFARRKGQARWVDERPHAIGSAR 485
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A830HHH2 (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HHH2_9CHLO) HSP 1 Score: 87.0 bits (214), Expect = 3.030e-15 Identity = 73/220 (33.18%), Postives = 111/220 (50.45%), Query Frame = 0
Query: 23 RKRLRNSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREKDAQFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSS---------GQVCVAMAYQG--YRKGIQYVL 231
R L +PVDLVI TP + + E+ L+ V T+VLDEAD LVS AGF T L+ +R D + + ATV ++K L + + + A LHR + K TF+RV G +D KLQ L + ++ K ++L+FC+ V+ +A L +G +VV GE K +R+ EAF+ VC +A +G +R + +V+
Sbjct: 187 RTVLARAPVDLVIATPKRLSDVHAEESLFFGDVKTVVLDEADTLVS--AGFNEVQT-LLERMRHPDRKSILVSATVTPAVQKLLAK-NFPQAKRAATKSLHRVPKN--AKHTFLRVPGDQD-KLQVLAD--TIRASHAKGNRVLVFCNTVQSCRAASHRLNEEGMNVVCHHGEV-PKSERARAVEAFARDGSEHEGPPAMVCTDLAARGLDFRADVDHVV 396
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A6P6UZ34 (DEAD-box ATP-dependent RNA helicase 39-like n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6UZ34_COFAR) HSP 1 Score: 74.3 bits (181), Expect = 5.820e-11 Identity = 59/217 (27.19%), Postives = 106/217 (48.85%), Query Frame = 0
Query: 28 NSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREKDA-------QFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSSGQ------VCVAMAYQGYRKGIQYVL 231
N+P+DLV+GTPG + E + + +VLDEAD + + GFGP + + L+ + + Q V AT+ ++K + G + + S LH+ +S R FI++ GSE+ KL+ L++V + +K ++++FC+ + +A+ L G V+ GE ++R + E F S VC +A +G + +V+
Sbjct: 259 NTPIDLVVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMF--DRGFGPDIRKFLGPLKNRASKHDGLGFQTVLVSATMTKAVQKLVDEEFQGIVHLRT-STLHKKIASAR--HDFIKISGSEN-KLEALLQVLEPSL--SKGNRVMVFCNTLNSSRAVDHFLHENGISTVNYHGEV-PAEERVENLEKFKSEDGDCPTLVCTDLAARGLDLDVDHVI 466
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A068TXU1 (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068TXU1_COFCA) HSP 1 Score: 73.2 bits (178), Expect = 1.200e-10 Identity = 58/217 (26.73%), Postives = 106/217 (48.85%), Query Frame = 0
Query: 28 NSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREKDA-------QFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSSGQ------VCVAMAYQGYRKGIQYVL 231
N+P+DL++GTPG + E + + +VLDEAD + + GFGP + + L+ + + Q V AT+ ++K + G + + S LH+ +S R FI++ GSE+ KL+ L++V + +K ++++FC+ + +A+ L G V+ GE ++R + E F S VC +A +G + +V+
Sbjct: 114 NTPIDLIVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMF--DRGFGPDIRKFLGPLKNRASKHDGLGFQTVLVSATMTKAVQKLVDEEFQGIVHLRT-STLHKKIASAR--HDFIKLSGSEN-KLEALLQVLEPSL--SKGNRVMVFCNTLNSSRAVDHFLHENGISTVNYHGEV-PAEERVENLEKFKSEDGDCPTLVCTDLAARGLDLDVDHVI 321
BLAST of Ggra5545.t1 vs. uniprot
Match: DEAD-box ATP-dependent RNA helicase 39 isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000901D223 (DEAD-box ATP-dependent RNA helicase 39 isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000901D223) HSP 1 Score: 73.2 bits (178), Expect = 1.410e-10 Identity = 60/217 (27.65%), Postives = 103/217 (47.47%), Query Frame = 0
Query: 28 NSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREKDAQFVDSG-------ATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSSGQ------VCVAMAYQGYRKGIQYVL 231
NSP+D+V+GTPG + E L + +VLDEAD + + GFGP + + L+ + A+ D G AT+ ++K + G +E S H+ +S R FIR+ GSE+ KL+ L++V + +K ++++FC+ + +A+ L V+ GE + R + E F VC +A +G + +V+
Sbjct: 248 NSPIDMVVGTPGRVLQHIEEGNLVYGDIRYVVLDEADTMF--DRGFGPDIRKFLRPLKTRAAKVDDQGFQTVLVTATMTKAVQKLVDEEFQG-IEHLRTSSFHKKIASAR--HDFIRLSGSEN-KLEALLQVLEPSL--SKGNRVMVFCNTLNSSRAVDHFLTENQISTVNYHGEV-PAEQRVENLEKFKRDDGDCPTLVCTDLAARGLDLDVDHVI 455
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A662WUR3 (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUR3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.170e-10 Identity = 52/172 (30.23%), Postives = 89/172 (51.74%), Query Frame = 0
Query: 31 VDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVL------REKDAQFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKG-TDVVHLSGE 195
+DLVIGTPG + ++ +VSR++T+V+DEAD L GF +L ++ + R + Q + + AT+ +++ L++ G L ++HR S++R + F+RV D+K L E + ++R A K ++FC N ++ LR G D V L G+
Sbjct: 198 LDLVIGTPGRVAKCISKGDFFVSRINTVVVDEADTLFDAKMGFRKELDAVLGPIQASAAKRNQPLQMILAAATIRPPLDQVLKKKFG-ELRTVSDDKIHRTPSTIREE--FVRV--MPDSKQSALREALQLHKRR--AAKTMVFCRNSASVRSTEHMLREHGFQDAVCLHGD 362
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A251THY7 (Putative RNA helicase, DEAD-box type, Q motif protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251THY7_HELAN) HSP 1 Score: 72.0 bits (175), Expect = 3.310e-10 Identity = 61/224 (27.23%), Postives = 107/224 (47.77%), Query Frame = 0
Query: 21 RSRKRLRNSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREK-------DAQFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSSGQ------VCVAMAYQGYRKGIQYVL 231
R ++ NSP+D+V+GTPG + E L + +VLDEAD + + GFGP + + L+ + D Q V AT+ + ++K + G +E S LH+ +S R FI++ GSE+ KL+ L++V + K ++++FC+ + +A+ L V+ GE +R + + F S VC +A +G + +V+
Sbjct: 235 RPQEDALNSPIDMVVGTPGRVLQHIQEGNLVYGDIKYLVLDEADTMF--DRGFGPDIRKFLGPLKNRAQKADGLDFQTVLVSATMTNAVQKLVDEEFQG-IEHLRTSTLHKKVASAR--HDFIKLSGSEN-KLEALLQVLEPSL--AKGNRVMVFCNTLNSSRAVDHFLSENQLATVNYHGEV-PAVERVENLKKFKSNDGDCPTLVCTDLAARGLDLDVDHVI 449
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A4D9B415 (ATP-dependent RNA helicase DDX18/HAS1 n=6 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9B415_SALSN) HSP 1 Score: 72.0 bits (175), Expect = 3.320e-10 Identity = 59/217 (27.19%), Postives = 103/217 (47.47%), Query Frame = 0
Query: 28 NSPVDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVLREKDAQFVDSG-------ATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKGTDVVHLSGEGRDKDDRSADWEAFSSGQ------VCVAMAYQGYRKGIQYVL 231
NSP+D+V+GTPG + E L + +VLDEAD + + GFGP + ++ LR + ++ G AT+ ++K + G + S LH+ +S R FI++ GSE+ KL+ L++V + K ++++FC+ + +A+ L V+ GE + R + E F S VC +A +G + +V+
Sbjct: 257 NSPIDMVVGTPGRVLQHIEEGNLVYGGIRYVVLDEADTMF--DRGFGPDIRKFLAPLRSRASKLDGLGFQTVLVTATMTTAVQKLVDEEFQGIAHLRTSS-LHKKIASAR--HDFIKLSGSEN-KLEALLQVLEPSL--AKGNRVMVFCNTLSSSRAVDHFLSENQISTVNYHGE-IPAEQRVENLEKFKSNDGDCPTLVCTDLAARGLDLDVDHVI 464
BLAST of Ggra5545.t1 vs. uniprot
Match: A0A2P4Y4S2 (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4S2_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.670e-10 Identity = 53/172 (30.81%), Postives = 89/172 (51.74%), Query Frame = 0
Query: 31 VDLVIGTPGSIEVMRNEQLLYVSRVSTIVLDEADELVSTNAGFGPQLTGLMSVL------REKDAQFVDSGATVPHTMEKELRRWHGGNLEVALGSRLHRATSSLRVKTTFIRVDGSEDAKLQKLIEVFSVAQKRTKAGKILIFCDNVKRGQAIVRELRSKG-TDVVHLSGE 195
+DLVIGTPG + ++ +VSR+ T+V+DEAD L GF +L ++ + R + Q + + AT+ +++ L++ G L V +H+ SS+R + F+RV+ ++K L E + ++R A K +IFC N ++ LR G D V L G+
Sbjct: 169 LDLVIGTPGRVAKCISKGDFFVSRIDTVVVDEADTLFDAKMGFRKELDAVLGPIQASAAKRNQPLQMILAAATIRSPIDQVLKKKFG-QLRVVSDDEIHKTPSSIREE--FVRVNP--ESKHSALREALHLHRRR--AAKTMIFCRNSASVRSTEHMLREHGFQDTVCLHGD 333 The following BLAST results are available for this feature:
BLAST of Ggra5545.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5545.t1 ID=Ggra5545.t1|Name=Ggra5545.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=334bpback to top |