Ggra5543.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5543.t1
Unique Name	Ggra5543.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	173

Homology

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BLAST of Ggra5543.t1 vs. uniprot
Match: A0A2V3IXD3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXD3_9FLOR)

HSP 1 Score: 203 bits (517), Expect = 3.860e-64
Identity = 107/149 (71.81%), Postives = 123/149 (82.55%), Query Frame = 0

Query:    1 MNIDSPPQEPLGNEALAPVAELQQYGASIIEELDRAEGELTNAENQPFNGISPQIMQDISRLREKQFDMFRRHVEIEQQYKIQNTVSEENSVHKMAFGAIAKTMRKKEKATAALLQHLERFDDELRDVMDKFETCRATQDEAVPSSEAD 149
            MN D+P QE L  + LAPVAELQ+YGASII ELDRAE EL ++ENQPF+GISPQ+MQDIS LR+KQFDMFR+HVEIEQQYKIQN VSE N+VH+  F +IAKT+RKKEKATA LL  LE+FD +LRDVMDKFETCRA Q E   S + D
Sbjct:    1 MNADTPSQEHLTTDTLAPVAELQEYGASIISELDRAEAELNDSENQPFSGISPQVMQDISELRKKQFDMFRQHVEIEQQYKIQNAVSEGNNVHQPGFTSIAKTLRKKEKATAGLLHKLEQFDGQLRDVMDKFETCRAAQREQDSSVQTD 149

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BLAST of Ggra5543.t1 vs. uniprot
Match: M2X399 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X399_GALSU)

HSP 1 Score: 62.0 bits (149), Expect = 3.610e-9
Identity = 34/112 (30.36%), Postives = 63/112 (56.25%), Query Frame = 0

Query:   21 ELQQYGASIIEELDRAEGELTNAENQPFNGISPQIMQDISRLREKQFDMFRRHVEIEQQYKIQNT-VSEENSVHKMAFGAIAKTMRKKEKATAALLQHLERFDDELRDVMDK 131
            +L +    +  EL  AE  L ++ N+PF    P++++ + RLR KQF+++    E+E+++   +   S       ++FG  A+++R++E AT  +LQ +   D ELR V+ K
Sbjct:   12 QLDELEEGLEAELAAAEARLADSRNRPFGERGPELLEQVERLRRKQFEVYIDQAELERRFPFPSKKFSSSGEKEDLSFGTFAESLREREVATDRILQKITDLDVELRSVLTK 123

The following BLAST results are available for this feature:

BLAST of Ggra5543.t1 vs. uniprot

BLAST of Ggra5543.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IXD3	3.860e-64	71.81	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
M2X399	3.610e-9	30.36	Uncharacterized protein n=1 Tax=Galdieria sulphura...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000842_pilon	contig	tig00000842_pilon:880806..881324 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5543.t1	Ggra5543.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000842_pilon 880806..881324 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5543.t1 ID=Ggra5543.t1|Name=Ggra5543.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=173bp
MNIDSPPQEPLGNEALAPVAELQQYGASIIEELDRAEGELTNAENQPFNG
ISPQIMQDISRLREKQFDMFRRHVEIEQQYKIQNTVSEENSVHKMAFGAI
AKTMRKKEKATAALLQHLERFDDELRDVMDKFETCRATQDEAVPSSEADK
TDSPQVSPDAGRQPAEEKGNQR*