Ggra5508.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5508.t1
Unique NameGgra5508.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Homology
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BLAST of Ggra5508.t1 vs. uniprot
Match: A0A2V3J117 (DUF1995 domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J117_9FLOR)

HSP 1 Score: 372 bits (956), Expect = 8.800e-128
Identity = 186/272 (68.38%), Postives = 219/272 (80.51%), Query Frame = 0 
Query:    1 MESHKFRPRCAVGFTLNCAALPAGVPSNAKAAASQIRQSIRTALISGHRRVCVDTLLTAIDPRSRTFDDPAAEIVFKALIESVQPLLPDSEPSVQVVVSGSAAALRVQKWLARSQLQGVSVDVLGAEERHDARSVVVIDPPTGRGVLQFRKLLREAHGREAHVVVHNQPREDSLYKLLGFGGYLPLEMMRYESAFVMAPFALQESEGAQSGRFVILKQFPGAWQLWRYLGRAPTMLKVDSEGDGEDSYTLCQEFKRRPGSDELIEAITNVLG 272
            M + K RPR A  F + C+ +P GVPSNAK+AASQIRQS+RTALISGHRRVCVD LL A+DPR+R FD+ AAE+VF AL++SVQP+LP+S   VQVVV GSAAALR QKWLARS+L+GV VDV+GAEE  DA SV+VIDPPT  GVL+FR+ LREAH R A VVVHN PR+DSLYKLLGFGGYLP EMMRYESAF++APF LQ +EG  + RFVI+++FP AWQLWR+LG   + L+ D       SY LCQEFK +PG DELI+AITNVLG
Sbjct:    1 MYTAKKRPRHAFAFPVLCSTVPQGVPSNAKSAASQIRQSVRTALISGHRRVCVDVLLAAVDPRARLFDEDAAEVVFNALVQSVQPVLPESTELVQVVVPGSAAALRAQKWLARSELKGVVVDVIGAEEHRDASSVLVIDPPTESGVLEFRRFLREAHARGAQVVVHNHPRDDSLYKLLGFGGYLPFEMMRYESAFMLAPFTLQATEGGSNCRFVIMRRFPSAWQLWRHLGEERSFLQEDGSTFDTGSYKLCQEFKDQPGGDELIQAITNVLG 272
The following BLAST results are available for this feature:
BLAST of Ggra5508.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1178.800e-12868.38DUF1995 domain-containing protein n=2 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 26..263
e-value: 2.2E-9
score: 37.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:624994..625812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5508.t1Ggra5508.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 624994..625812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5508.t1 ID=Ggra5508.t1|Name=Ggra5508.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MESHKFRPRCAVGFTLNCAALPAGVPSNAKAAASQIRQSIRTALISGHRR
VCVDTLLTAIDPRSRTFDDPAAEIVFKALIESVQPLLPDSEPSVQVVVSG
SAAALRVQKWLARSQLQGVSVDVLGAEERHDARSVVVIDPPTGRGVLQFR
KLLREAHGREAHVVVHNQPREDSLYKLLGFGGYLPLEMMRYESAFVMAPF
ALQESEGAQSGRFVILKQFPGAWQLWRYLGRAPTMLKVDSEGDGEDSYTL
CQEFKRRPGSDELIEAITNVLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995