Ggra5507.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5507.t1
Unique NameGgra5507.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length361
Homology
BLAST of Ggra5507.t1 vs. uniprot
Match: A0A2V3IZS0 (Replication factor C subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS0_9FLOR)

HSP 1 Score: 606 bits (1563), Expect = 2.350e-217
Identity = 311/357 (87.11%), Postives = 336/357 (94.12%), Query Frame = 0
Query:    1 MASEGLLWVDKYRPSTFTELSYNASLTKNLQSLSNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKLEKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLDVKKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQQATMMD 357
            M++EGLLWVDK+RPSTF+ELSY++ LTKNLQSLSN ++PHLLFYGPSGAGKRTR HCVLRALFGQ VEKKKVVHRTLK+E KQ+EVTTVAS HHIEVNPSESG  DRLVVQELIKDMASSAPLD+KKSLKVIV+HDVDQM++LAQQALRRTMERYSKTCRVIMVAES+TK++EPLRSRC+GIRVA PS SDI  VLQSVA KEGITLP+ L QRIAETS RN+RRALLQFEATRVSVGAL LP++AQVMLGDWEY CQDLAVMLTRSQTA QLIAVRK+LQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAF+ARFMQIYA FL+QQA MMD
Sbjct:    1 MSTEGLLWVDKHRPSTFSELSYHSVLTKNLQSLSNTEVPHLLFYGPSGAGKRTRVHCVLRALFGQVVEKKKVVHRTLKVETKQIEVTTVASAHHIEVNPSESGNNDRLVVQELIKDMASSAPLDMKKSLKVIVLHDVDQMSQLAQQALRRTMERYSKTCRVIMVAESITKVLEPLRSRCLGIRVALPSKSDIGVVLQSVAHKEGITLPDALVQRIAETSGRNLRRALLQFEATRVSVGALELPSDAQVMLGDWEYVCQDLAVMLTRSQTAHQLIAVRKKLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFAARFMQIYAAFLKQQAAMMD 357          
BLAST of Ggra5507.t1 vs. uniprot
Match: R7Q9E5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9E5_CHOCR)

HSP 1 Score: 509 bits (1312), Expect = 5.470e-179
Identity = 259/367 (70.57%), Postives = 310/367 (84.47%), Query Frame = 0
Query:    1 MASEGLLWVDKYRPSTFTELSYNASLTKNLQSL-SNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL--EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLD-------VKKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQQATMMD 357
            MAS+ LLWVDKYRPS+F ELS++  LTK L++L S+ D+PHLLFYGPSGAGKRTRA CVL+ALFG   +KKKVVHR  K+    KQVEVTTVAS HH+E NPSESG  DRLVVQELIKDMAS AP+D       +KKSLKVIV+H+VDQM+RLAQQALRRTME+YS+TCR+IM+AESVT+++EPLRSRC+GIRV  P+   I SVL  +A++EG++LPE L++R+A+ S RN+RRA+LQFEATRVSVG L LP  A +M GDWEYAC D A+++TRSQ+A QL+ VRKRLQELLAHA+P DVILRRL+E IL IADDEICPEIC+++AKFDRNLT GTKPIFHLEAF+ARFMQ+YA FLR QA M+D
Sbjct:    1 MASDSLLWVDKYRPSSFDELSFHEDLTKRLRNLCSSNDIPHLLFYGPSGAGKRTRAGCVLKALFGPRADKKKVVHRVFKVGESSKQVEVTTVASSHHVEFNPSESGNNDRLVVQELIKDMASFAPIDMTSSNVSIKKSLKVIVLHEVDQMSRLAQQALRRTMEKYSRTCRIIMIAESVTRVLEPLRSRCLGIRVGLPTEGHIQSVLSGIAKREGVSLPEPLSKRLAQQSSRNLRRAILQFEATRVSVGGLDLPPGAPIMRGDWEYACNDAAILMTRSQSAQQLVHVRKRLQELLAHAIPPDVILRRLVENILNIADDEICPEICQLSAKFDRNLTNGTKPIFHLEAFAARFMQVYAQFLRSQAVMLD 367          
BLAST of Ggra5507.t1 vs. uniprot
Match: A0A7S2ZIE5 (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIE5_9RHOD)

HSP 1 Score: 349 bits (896), Expect = 1.780e-115
Identity = 185/384 (48.18%), Postives = 259/384 (67.45%), Query Frame = 0
Query:    3 SEGLLWVDKYRPSTFTELSYNASLTKNLQSLSN-ADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL--EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLDV---KKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVS--------VGAL--SLPA--------------EAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQQATMM 356
            + GLLWVDKYRP+T  E+ ++  L + L+ ++  AD+PHLLF+GP G+GKRTR  C+LR ++G A EK KV HR+ K+    K++E+T ++SVHHIE NPS++G  DRL+VQELIK++AS+APLDV   K   KVIV+H+VD ++R  QQALRRTME+YS+TCR+I++A+S+TKIIEPLRSRC  +RV  PS  +I +VLQ V++KEG  LP+  A ++     +N+RR LLQ +++++         VGA   ++P+                 V   DWE  C D+A +L R Q+  +L+ VR R  ELL HA+P D I  R+  E+LR AD EI P IC  AA+++  L +G K I HLEAF+ARFMQIY  ++  Q +M+
Sbjct:    5 NRGLLWVDKYRPATLEEMDFHLELKERLEGMAQRADIPHLLFHGPPGSGKRTRVSCLLRLIYGPAAEKLKVEHRSFKVGDPPKEIEMTILSSVHHIEANPSDAGFSDRLIVQELIKEIASNAPLDVTAVKVPFKVIVLHEVDSLSRTGQQALRRTMEKYSRTCRLILMADSLTKIIEPLRSRCNLVRVPSPSEKEICAVLQKVSKKEGFELPDQFAVKVTRACSKNLRRGLLQLQSSKMDNYPFAEDQVGATPPNIPSCTSFLSSSVGFFNPTQPVSRADWELVCIDIASLLMREQSNKRLLLVRTRFYELLTHAIPADAIFERVTMELLRSADQEIAPAICECAAEYEHRLKQGQKAIIHLEAFAARFMQIYKEYIDNQYSML 388          
BLAST of Ggra5507.t1 vs. uniprot
Match: A0A5J4YYK4 (Replication factor C subunit 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYK4_PORPP)

HSP 1 Score: 325 bits (834), Expect = 5.390e-106
Identity = 176/381 (46.19%), Postives = 242/381 (63.52%), Query Frame = 0
Query:    5 GLLWVDKYRPSTFTELSYNASLTKNLQSL-SNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL--EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLDV---------------------------------KKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFL 349
            GL+WVDK+R +   +L  + +L   L +L    D+PHL FYGP GAGKRTR   VL  LFG + EK +V HR  KL    K+VE+T V S HH+E+NPS+ G+KDRLVVQE+IK++ASS PLD                                  K + KV+V+HDVD+M+RLAQQALRRTME+Y++TCR+IM+A S +K+IEPLRSRC+G+RV  PS +++V VL+ VA KEG  + +    ++  +S RNMRRALLQ EA++      S  AE QV   DWE AC  ++ ++   Q    L+ VR++L +LL HA+P D+I   ++  +LR  D E+ P++   AA ++  + KG+KPI HLEAF ARFMQ+Y  +L
Sbjct:   15 GLMWVDKHRSTNLAKLEVHKALNVRLLNLVRQGDVPHLFFYGPPGAGKRTRVMGVLHELFGASAEKLRVQHRVFKLGDPPKEVEMTLVMSNHHVEMNPSDVGIKDRLVVQEMIKEIASSVPLDAFQTTKKKEQNAAGPEPQGAAAAGANTSNNSAAHKPAFKVLVLHDVDRMSRLAQQALRRTMEKYARTCRIIMLATSASKVIEPLRSRCLGVRVPLPSDTELVQVLRHVANKEGFIVTDSFGAKVVASSGRNMRRALLQLEASKSQNYPFS--AEQQVTKADWELACASISDLMLVQQAPRTLLTVRQKLYDLLTHAIPADIIFHAIVANLLRQVDQELAPQLVAHAAMYEHRMQKGSKPILHLEAFCARFMQLYKAYL 393          
BLAST of Ggra5507.t1 vs. uniprot
Match: A0A2P6NPP5 (Replication factor C subunit 3 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NPP5_9EUKA)

HSP 1 Score: 323 bits (827), Expect = 1.540e-105
Identity = 163/351 (46.44%), Postives = 242/351 (68.95%), Query Frame = 0
Query:    3 SEGLLWVDKYRPSTFTELSYNASLTKNLQSLSNAD-MPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKLEKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLDV---KKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFL 349
            ++G LWVD+YRP++  +L  +  LT  L+ +  +D +PHLLFYGPSGAGK+TR   VLR+LFG +VEK KV H+ +K+  K +E++ V+S HH+EVNPS+   +DR+VVQE+IK++A S PLD    +KS KV+V+H+VD++++ AQ ALRRTME+Y  TCR+I+V  S +K+I+PLRSRC+ +RV  P+  +I S LQS+A+KEG+ L   LA RIAE S RN+R+A+L FEA +V            +   DWE   + +A  +++ Q+  +L  +R R  ELL H +P ++I++ L  E+L   D E+  ++ + AA +++ +  G+KPIFHLEAF A+FM +Y  FL
Sbjct:    4 NDGTLWVDRYRPTSLEKLDIHTDLTNQLKKMCTSDNLPHLLFYGPSGAGKKTRVKAVLRSLFGASVEKVKVEHKAIKINTKTIEISIVSSSHHVEVNPSDVEFQDRVVVQEIIKEIAQSVPLDAGTAQKSFKVVVLHEVDKLSKDAQHALRRTMEKYVATCRLILVCNSTSKVIDPLRSRCLPVRVPLPTIKEITSTLQSIAKKEGVNLSTDLANRIAEQSGRNLRKAILSFEAAKVK--QYPFAPNQVIERADWEDFIKQMADEISQEQSPQRLQLIRSRFYELLVHCIPPEIIMKNLTMELLGRVDTELKYDVVKWAAHYEQRMQTGSKPIFHLEAFVAKFMSLYKQFL 352          
BLAST of Ggra5507.t1 vs. uniprot
Match: M2XY78 (Replication factor C subunit 3/5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY78_GALSU)

HSP 1 Score: 323 bits (829), Expect = 3.170e-105
Identity = 169/378 (44.71%), Postives = 249/378 (65.87%), Query Frame = 0
Query:    5 GLLWVDKYRPSTFTELSYNASLTKNLQSL-SNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKLEK--KQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLD---VKKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLG----------------DWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQQATM--MDE 358
            GLLWVDKYRP T   L  +   T+ L SL     +PHLLFYGPSG GKRTR + +LR +FG A+EK++V HR LK+ +  K+VE+TT+ S HHIE+ P++ G  DRLV+QE++K++ASS P++   V +  KV+V+HD+D++++ AQQALRRTME+Y+  CR+IM AESVT+++EP+RSRC+GIR+  P   +I  VLQ +A+KEG+ LP+  A ++   S+ N+R+A+L  +  R    A++ P   Q                    DWE  C D+A ++ R Q   QL  +R +L EL  HA+PGD+I R++   +LR+ D+E+ P++C  AA ++  + +G+K IFHLEAF A+ M IY + +  Q +M  MD+
Sbjct:   28 GLLWVDKYRPKTLETLDIHPEWTEKLASLCEQGTLPHLLFYGPSGVGKRTRIYALLRQVFGIAIEKRQVEHRFLKVGEPPKEVELTTITSAHHIELCPADVGYNDRLVIQEIVKEIASSKPIELGNVHRGYKVVVLHDIDEVSKQAQQALRRTMEKYTSCCRIIMSAESVTRVMEPIRSRCLGIRIPCPKKEEIEQVLQKIAKKEGLVLPDCYANQLVTQSKGNLRKAILLLQVGR----AIAYPFSQQXXXXXXXXXXSWISSQETGWDWERLCYDIANIVIREQNPKQLCNIRNKLYELFCHAIPGDMIFRKITLHLLRMMDEEVAPQVCHWAAHYEYGMKRGSKEIFHLEAFLAKVMYIYYSHIHTQYSMAWMDD 401          
BLAST of Ggra5507.t1 vs. uniprot
Match: replication factor C subunit 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014256272 (replication factor C subunit 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014256272)

HSP 1 Score: 318 bits (814), Expect = 1.380e-103
Identity = 166/356 (46.63%), Postives = 244/356 (68.54%), Query Frame = 0
Query:    7 LWVDKYRPSTFTELSYNASLTKNLQSLSN-ADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL-EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLD--VKKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQ--QATMM 356
            LWVDKYRP++ ++L Y+     NL+ L N  D PHLL YGPSGAGK+TR  C+LR ++G  VEK ++ H+T      K++E+TT+AS +HIEVNPS+ G++DR+V+QELIK +A +  L+   ++  KV+++ +VD++T+ AQ ALRRTME+Y  TCR+I+ + S +K+I  +RSRC+G+RVA PS  +I  +LQ++ +KEG+TLP  L +RIAE S RN+RRA+L  EA RV     S  A+ +V   DWE   ++ A  + + Q+   L+ VR RL ELL H +P D+I++ LL+E++   D ++  EI ++AA ++  L  G+K I+HLEAF A+FM IY  FL    +A MM
Sbjct:    3 LWVDKYRPTSLSKLDYHKDQAANLKKLVNRGDFPHLLVYGPSGAGKKTRIMCLLREVYGAGVEKLRIEHQTFTTPSNKKIEITTIASNYHIEVNPSDVGIQDRVVIQELIKTVAQTQQLESSTQREFKVVILTEVDRLTKDAQHALRRTMEKYMSTCRLILCSNSTSKVIPAIRSRCLGVRVAAPSLDEITQILQTICKKEGLTLPSELGRRIAEKSGRNLRRAVLMCEACRVQQYPFS--AQQEVQEPDWEIFLRETANKIVQEQSPKMLLEVRGRLYELLTHCIPADIIMKALLKELILNCDGQLKSEITQIAAFYEHRLQMGSKVIYHLEAFVAKFMSIYKRFLEDGLEAMMM 356          
BLAST of Ggra5507.t1 vs. uniprot
Match: A0A8B7YGV1 (replication factor C subunit 3-like n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7YGV1_ACAPL)

HSP 1 Score: 317 bits (812), Expect = 2.760e-103
Identity = 168/349 (48.14%), Postives = 239/349 (68.48%), Query Frame = 0
Query:    7 LWVDKYRPSTFTELSYNASLTKNLQSL-SNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL-EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLD--VKKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQ 351
            LWVDKYRPS+ ++L ++     NL+ L    D PHLL YGPSGAGK+TR  C LR L+G  VEK ++ H++     KK++EV+T+AS +HIEVNPS++G+ DR+V+QEL+K +A +  LD   +K  KV+++ +VD++T+ AQ ALRRTME+YS TCR+I+ A S +K+I  +RSRC+GIRV  PS  +I  +LQ V +KEG++LP  L++RIAE S+RN+RRALL  EA +V     S   E  V   DWE   ++ A  +   QT  +L+ VR +L ELL H +P DVI++ LL+E++   D ++  EI +VAA ++  L  G+KPI+HLEAF  +FM IY  FL +
Sbjct:    3 LWVDKYRPSSLSKLDFHKEQAANLRKLVQGGDFPHLLIYGPSGAGKKTRIMCTLRELYGSGVEKLRIEHQSFTTPSKKKIEVSTIASNYHIEVNPSDAGIYDRVVIQELLKTVAQTQQLDSSAQKDFKVVLLTEVDRLTKDAQHALRRTMEKYSATCRLILCANSTSKVIPAIRSRCLGIRVPAPSIDEICQILQVVCKKEGLSLPAQLSKRIAEKSDRNLRRALLMCEACKVQQYPFSETQEIPVP--DWEVFLRETANAIVNEQTPQRLLEVRGQLYELLTHCIPPDVIMKGLLKELISNCDGQLKSEITQVAAFYEHRLQLGSKPIYHLEAFVVKFMSIYKRFLEE 349          
BLAST of Ggra5507.t1 vs. uniprot
Match: replication factor C subunit 3-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0384CC (replication factor C subunit 3-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0384CC)

HSP 1 Score: 315 bits (806), Expect = 2.230e-102
Identity = 169/357 (47.34%), Postives = 242/357 (67.79%), Query Frame = 0
Query:    7 LWVDKYRPSTFTELSYNASLTKNLQSL-SNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL-EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLDV--KKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQQATMMDEG 359
            LWVDKYRP++  +L Y+ +LT +L+ L S+ D PHL+FYGPSG+GK+TR  CVLR L+G    K K+  +T      K+VE++++AS +HIEVNPS++G+ DR+V+Q+LIK +A S  LD   +K  KV+++ +VD++T+ AQ ALRRTME+Y+ TCR+I+   S +K+I  +RSRC+GIRV  P+  +I  +L +V +KEG+TLPE LA+RI+E S RN+RRALL  EA RV     S   + Q+   DWE   +  A  +T  Q+  +L  VR RL ELLAH +P DVI++ L++E++   D  +  E+ R+AA ++  L +G K I+HLEAF A+FM IY  FL       DEG
Sbjct:    3 LWVDKYRPNSLAKLDYHKNLTAHLKKLASSRDFPHLMFYGPSGSGKKTRIMCVLRELYGPGAMKLKIQQQTFTTPSNKKVEISSIASNYHIEVNPSDAGIYDRVVIQDLIKTVAQSHQLDSGSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYTATCRIILYCNSTSKVIPAIRSRCLGIRVPAPTNEEISQILNNVCRKEGLTLPEELARRISEKSGRNLRRALLMCEACRVQQYPFS--DDQQIQEADWEVYLKATAQAITEIQSPQRLFEVRGRLYELLAHCIPADVIMKGLVQELVSNCDGSLKAEVSRIAAFYEHRLQRGNKVIYHLEAFVAKFMSIYKRFL-------DEG 350          
BLAST of Ggra5507.t1 vs. uniprot
Match: replication factor C subunit 3-like n=3 Tax=Penaeus TaxID=133894 RepID=UPI0018A6FB69 (replication factor C subunit 3-like n=3 Tax=Penaeus TaxID=133894 RepID=UPI0018A6FB69)

HSP 1 Score: 313 bits (802), Expect = 8.680e-102
Identity = 164/354 (46.33%), Postives = 239/354 (67.51%), Query Frame = 0
Query:    7 LWVDKYRPSTFTELSYNASLTKNLQSL-SNADMPHLLFYGPSGAGKRTRAHCVLRALFGQAVEKKKVVHRTLKL-EKKQVEVTTVASVHHIEVNPSESGLKDRLVVQELIKDMASSAPLDV--KKSLKVIVMHDVDQMTRLAQQALRRTMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVAQKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVMLGDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEEILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLRQQATMM 356
            LWVDKYRP   ++L ++     +L+ L    D PHLL YGPSGAGK+TR  C+LR L+G  VEK ++ H+  +   KK++E+ T+AS +HIEVNPS+ G+ DR+V+QELIK +ASS  LD   ++  KV+V+++VD++T+ AQ ALRRTME+Y  TCR+I+ A S +K+I  +RSRC+G+R+  P+  D+V VLQ+V +KEG++LP  LA+RIA+ S RN+RRA+L  EA RV     S   +  + + DWE   Q+ A  +   Q+ ++L+ VR R+ ELL H +P +VI + LL+E++R  D E+  E+ R+AA  +  L  G+K I+H+EAF A FM IY  FL    + M
Sbjct:    3 LWVDKYRPRELSKLDFHLEKGAHLKKLVEGGDFPHLLVYGPSGAGKKTRIMCLLRELYGPGVEKLRIEHQNFQTPSKKKLEIVTIASNYHIEVNPSDVGIYDRVVIQELIKTVASSQQLDTSGQREFKVVVLNEVDKLTKDAQHALRRTMEKYMATCRLILCANSTSKVIPAIRSRCLGVRIPAPTVEDVVKVLQAVCKKEGLSLPTELAKRIADKSNRNLRRAILMCEACRVQQYPFS--PQQDISIPDWEVFLQETAAKIVEEQSPNRLLDVRGRIYELLTHCIPPEVIFKGLLKELVRNCDGELKCEVTRLAAYHEHRLNLGSKAIYHIEAFIAAFMAIYKKFLEDSMSAM 354          
The following BLAST results are available for this feature:
BLAST of Ggra5507.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZS02.350e-21787.11Replication factor C subunit 3 n=1 Tax=Gracilariop... [more]
R7Q9E55.470e-17970.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZIE51.780e-11548.18Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YYK45.390e-10646.19Replication factor C subunit 3 n=1 Tax=Porphyridiu... [more]
A0A2P6NPP51.540e-10546.44Replication factor C subunit 3 n=1 Tax=Planoprotos... [more]
M2XY783.170e-10544.71Replication factor C subunit 3/5 n=1 Tax=Galdieria... [more]
replication factor C subunit 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142562721.380e-10346.63replication factor C subunit 3-like n=1 Tax=Anneis... [more]
A0A8B7YGV12.760e-10348.14replication factor C subunit 3-like n=3 Tax=Astero... [more]
replication factor C subunit 3-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0384CC2.230e-10247.34replication factor C subunit 3-like n=1 Tax=Xenia ... [more]
replication factor C subunit 3-like n=3 Tax=Penaeus TaxID=133894 RepID=UPI0018A6FB698.680e-10246.33replication factor C subunit 3-like n=3 Tax=Penaeu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..187
e-value: 3.5E-47
score: 162.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..235
NoneNo IPR availablePFAMPF13177DNA_pol3_delta2coord: 33..185
e-value: 4.7E-12
score: 46.3
NoneNo IPR availableGENE3D1.10.8.60coord: 188..246
e-value: 4.5E-15
score: 57.0
NoneNo IPR availableGENE3D1.20.272.10coord: 252..345
e-value: 1.8E-25
score: 91.0
NoneNo IPR availablePANTHERPTHR11669:SF1REPLICATION FACTOR C SUBUNIT 3coord: 7..346
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 7..346
NoneNo IPR availableCDDcd00009AAAcoord: 30..179
e-value: 1.63676E-8
score: 50.9927
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 252..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:623411..624493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5507.t1Ggra5507.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 623411..624493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5507.t1 ID=Ggra5507.t1|Name=Ggra5507.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=361bp
MASEGLLWVDKYRPSTFTELSYNASLTKNLQSLSNADMPHLLFYGPSGAG
KRTRAHCVLRALFGQAVEKKKVVHRTLKLEKKQVEVTTVASVHHIEVNPS
ESGLKDRLVVQELIKDMASSAPLDVKKSLKVIVMHDVDQMTRLAQQALRR
TMERYSKTCRVIMVAESVTKIIEPLRSRCVGIRVARPSTSDIVSVLQSVA
QKEGITLPEHLAQRIAETSERNMRRALLQFEATRVSVGALSLPAEAQVML
GDWEYACQDLAVMLTRSQTASQLIAVRKRLQELLAHAVPGDVILRRLLEE
ILRIADDEICPEICRVAAKFDRNLTKGTKPIFHLEAFSARFMQIYATFLR
QQATMMDEGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR008921DNA_pol3_clamp-load_cplx_C