Ggra5506.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5506.t1
Unique NameGgra5506.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length286
Homology
BLAST of Ggra5506.t1 vs. uniprot
Match: A0A2V3J2M2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2M2_9FLOR)

HSP 1 Score: 405 bits (1041), Expect = 2.510e-140
Identity = 205/282 (72.70%), Postives = 230/282 (81.56%), Query Frame = 0
Query:    1 MQMDGSDFDVYDDDFAEASVEAISLAALRPPAPNDPPLDHAFPQNPPRRIHSALSXXXXXXXXXXXXXXXXXXXHPSLWHHHVFTLPHNAIRAELLDLYDMLHAMSPRTAPLLTDWHYVFDDFLARYLLFEKEALIPWVYASHSDALPDRSSLEKRAAAIGEARTELSQSVCLMRTMSFTNVIPLLMRAARQLTDAVLTYMDIQDKNFPTVIRSFRTREDALNVERLMTKRMDVGILLRWIHSRSQRTQLRTKLLSPKGWILWFRRGNKTLIDHQSIVDAIL 282
            MQ++ ++F VYDDDFAEAS+EAISLAALRP    D  LDHAFP NPPRRIHSAL+                   HPSLWHHHV  LPHNAIRAEL+DL  +LHA+SPRTAPLLTDWH  FDDFLARY  FEK+ALIPWVYASHSD LPDRS+LEKRAA I +AR ELSQSV LMRTMSF NVIPLL+RA+R+LTDAVL+Y D+QD+NFP+VIRSFRTREDA NVERLM +RMDVGILLRWI SR+QR QLRT+LLS KGWI W R+GNKTL+DH SIV AI+
Sbjct:    1 MQLEDTEFGVYDDDFAEASIEAISLAALRPAPQPDLSLDHAFPPNPPRRIHSALAACRPPQTPALARLPHHP--HPSLWHHHVLALPHNAIRAELVDLCALLHAVSPRTAPLLTDWHIPFDDFLARYFQFEKDALIPWVYASHSDTLPDRSALEKRAALITQARNELSQSVSLMRTMSFANVIPLLVRASRELTDAVLSYFDVQDRNFPSVIRSFRTREDACNVERLMARRMDVGILLRWIASRTQRAQLRTRLLSAKGWISWLRKGNKTLVDHLSIVHAIV 280          
BLAST of Ggra5506.t1 vs. uniprot
Match: A0A7S1XGN0 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGN0_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 6.270e-8
Identity = 57/227 (25.11%), Postives = 96/227 (42.29%), Query Frame = 0
Query:   79 WHHHVFTLPHNAIRAELLDLYDMLHAMSPRTAPLLTD-------WHYVFDDFLARYLLFEKEALIPWVYASHSDALPDRS------SLEKRAAAIGEARTELSQSVCLMRTMSFTNVIPLLMRAARQLTDAVLTYMDIQDKNFPTVIRSFRTREDALNVERLMTKRMDVG--------ILLRWIHSRSQRTQLRTKLLSPKGWILWFRRG-NKTLIDHQSIVDAILG 283
            W   VF+LPHNAIR EL+DLY +L A+  R A    +       W  VF  F+  Y   E   L+P +  +  D +  +        +E     + +   E+++ V  +  +   +V PLL +A       +L Y   ++   P+ I  F +      + + M   + VG        +L  W+  + Q +  + K L      + F+R  +K L  H+ IV+   G
Sbjct:   52 WAQEVFSLPHNAIRRELIDLYTILGAVYKRNARTAREEDEKFSHWWSVFSAFVEEYFDIEARILLPLIGPAEEDPVHKQDIAVLMYQMEDARIKLVKKLREVNEVVEKLFVLPMKDVFPLLCKALDHFVPMLLDYFIEEEDVLPSYILGFHSLVMKDVILQKMADFVLVGREPQLFIVMLSAWMDDKEQLSNWKKKALRGYNRFINFQRWESKYLRTHKKIVEDFHG 278          
The following BLAST results are available for this feature:
BLAST of Ggra5506.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2M22.510e-14072.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XGN06.270e-825.11Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:621379..622236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5506.t1Ggra5506.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 621379..622236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5506.t1 ID=Ggra5506.t1|Name=Ggra5506.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=286bp
MQMDGSDFDVYDDDFAEASVEAISLAALRPPAPNDPPLDHAFPQNPPRRI
HSALSPRRTPTAHSPAVTHLPHHPHPSLWHHHVFTLPHNAIRAELLDLYD
MLHAMSPRTAPLLTDWHYVFDDFLARYLLFEKEALIPWVYASHSDALPDR
SSLEKRAAAIGEARTELSQSVCLMRTMSFTNVIPLLMRAARQLTDAVLTY
MDIQDKNFPTVIRSFRTREDALNVERLMTKRMDVGILLRWIHSRSQRTQL
RTKLLSPKGWILWFRRGNKTLIDHQSIVDAILGVP*
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