Ggra5504.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5504.t1
Unique NameGgra5504.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1162
Homology
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A2V3IZT0 (Heterogeneous nuclear ribonucleoprotein C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZT0_9FLOR)

HSP 1 Score: 838 bits (2164), Expect = 1.330e-285
Identity = 549/1035 (53.04%), Postives = 624/1035 (60.29%), Query Frame = 0
Query:    1 MSASHTSAQNANSTSLLQNPSGIVSHVRALPQQPSLETRSLP-EPDETQQQ--LPVAQSSPQEPKVPVSPTTPTNNPSISISPNAVDDVPNSPATQQNPNPSLSAPAPVQIDARSPSHAPPASPNTDLAAAKTDPGAQMLSASNETVSKVDMSPPPNAMAAPSCPVSVNPSSPNTQPTMPEQKNIAKGPEQAGSHSLQGDDAQNFAAHEAKQSADVSFVQHTQSTTPSKVAASVLPPPLHHSPEESNDLPHNSTVEQTVHSLQHPHAAQSTPDPTTQPMQS--VTQGTVDSQNAVDPKTGDRGKDQPSAAAPPTSISQPATSLRNDLEASASHSVRNAPQTSGTQPQPPASASTTST---RNPQGDR------PLPRNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGIIMPNSVANHYTNPGPVQGNMGVNMGNTMHPGVGVNSAMGNNRPAWSMQSGMSSQDGKSGWVNGSRVPRGGRNIQAAAPNMGNLPMHPPPXXXXXXXXXXXXXXYGYDMHPGNTTYGQVGMSG-GRDDSYARQDYIGSQGFGADYNRNP--QLYNTNGVGTYPEEQYNQTNNRGAYGNRTDHEYDPAAVTPTQRPGAAMGDGYAWNRSSGGRGVGYG--AMTGGTNAPNQQRMGASYSTGGQYSNQEYSEN-QYQGQGQVQYGSSYDSRTPYANAGTNNTQGYGTYGTSGGSYGHGNETREQYGSHSYNARYGQGRGNSQYRNSGWNETGAPRPMNNPMGGYYNASNTMNRSGGTRGQAETAPENRYLEYDYGRNNANSEYGGPQGYGNRQ 1015
            MSASHTS  N + TS   +PS  VS V    Q   LETRSLP +PD TQQQ   P AQ SPQEPKVPVS              NAV+D   + A Q N  PS SAPA  QI+ R+ S  PP+SP T+             SA+  +V KV+  PP                                                             +  Q +Q+  P K        P   +PE++       T  +  H                   +   VTQGT  +  AVD +T D                                 VR        QP  PA     S     NP   R       LPRNLPK+ K+RPKNARVFIGNLASEYTS +EIVEIFHKYGTLIEEPVLRRSFGFVQYS AE+AS+AVK+EQGR+IGGIALDLSIADNREVKKGTHIQNNTPFQHPK H +GQF Q RGRVRDRDH+G   Q  RKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGI+LRILCMSPTAKGYARHCEN FRNMTGLNADIL+IVATNLGEALGKAMRD IPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERG+IMP+ VAN YTN GPVQGN G NM    H  +G N  MG++RP W MQ GM   D KSGW  GSR PRGGRNI   +P MG+LP+HPP  XXXXXXX      YGYD H G+T YGQ  M G GRD+ Y+R  Y                Q Y  NG+ +Y  +QY Q+       +  DHEYDPAAVTPTQRPGA +GDGY WNR +G R + YG  A T  TN    QR+  SY+ GGQYS+ EY+ N QY  QGQ QYG +YDSR  Y N G N  QGY  YG +G  Y  GN+TR+QY +  Y+ RYGQGR N+ YR+SGW+E+ + RPMNN MG YYNA N + R+GG R QA+ + +NRY      RN+ ++ Y  P GYGNRQ
Sbjct:    1 MSASHTSDPNTHPTSHPSHPSATVSDV----QNSLLETRSLPPQPDNTQQQHQSPAAQPSPQEPKVPVSXXXXXXXXXXXXXSNAVEDTTTALANQSN-LPSGSAPATEQIEPRNSSPRPPSSPETNRHLPPPGLADHSQSATTTSVPKVEPHPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSTTH-QSSQTHAPLKAETVAPSQPSFQTPEQATA----DTSAKADHKAXXXXXXXXXXXXXXXXHKDHIVTQGTA-TPRAVDAQT-DADNXXXXXXXXXXXXXXXXXXXXXXXXXXXQERVRPQKHHPDEQPSFPAGNDINSQVRDLNPSSPRLLLSTRSLPRNLPKYVKSRPKNARVFIGNLASEYTSPREIVEIFHKYGTLIEEPVLRRSFGFVQYSTAESASLAVKNEQGRMIGGIALDLSIADNREVKKGTHIQNNTPFQHPKSHLSGQFPQTRGRVRDRDHSGLPQQGARKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIFLRILCMSPTAKGYARHCENVFRNMTGLNADILYIVATNLGEALGKAMRDTIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGVIMPSVVANQYTNMGPVQGNRGGNM----HQNMGANGGMGSSRPQWGMQHGMPPPDNKSGWGLGSRGPRGGRNIPNPSP-MGSLPVHPP--XXXXXXXVMNGSGYGYDSHGGSTNYGQSNMGGTGRDEDYSRSGYXXXXXXXXXXXXXXAAQSYTGNGMNSYTSDQYGQSGXXXXXXSGADHEYDPAAVTPTQRPGATVGDGYNWNRGTGTRDMAYGGNAQTT-TNGSGSQRLHGSYTPGGQYSSNEYTNNGQYHDQGQGQYGGAYDSRHSYGNVGNNAGQGYDGYGNAGEPYASGNDTRDQYNTQPYDPRYGQGRSNAPYRSSGWSESVSGRPMNNQMGMYYNAPNQVGRTGGMRSQADASQDNRYGXXXXXRNDMSAGYTAPPGYGNRQ 1015          
BLAST of Ggra5504.t1 vs. uniprot
Match: R7QA32 (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA32_CHOCR)

HSP 1 Score: 449 bits (1154), Expect = 3.540e-134
Identity = 297/588 (50.51%), Postives = 349/588 (59.35%), Query Frame = 0
Query:  302 PSAAAPPTSISQPATSLRNDLEASASHSVRNAPQTSGTQPQPPASASTTS-TRNPQGD------RPLPRNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDH-TGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGIIMPNSVANHYTNPGPVQGNMGVNMGNTMHPGVGVNSAMGNNRPAWSMQSGMSS-----QDGKSGWVNGSRVPRGGRNIQAAAPNMGNLPMHPPPXXXXXXXXXXXXXXYGYDMHPGNTTYGQVGMSGGRDDSYARQDYIGSQGFG------------------------------ADYNR------NPQLYNTNGVGTYPEEQYNQTNNRGA--YGNRTDH---EYDPAAVTPTQR-PGAAMGDGYAWNR 834
            P+ +A P +   P TS  +   A+   SVR AP  + T P P      TS T+ P  D      RP PR LPK  K+RP+NARVFIGNLASEYT   +I++IFHKYG LIEEPVLRRSFGFVQYS+AEAAS AV  EQGRIIGGI +DLSIADNREVK+GTH+ NNTPF  P P  AG+ +  RGRVR+RD  +  +    RKRRRS+SP SA +KGGVHPPQY R RPDP+NG+YLRILCMSPTA+ YAR CENTFR+MTGL AD+LHIVA  LGEALG+AMRD IPYVMVVAS+DV+ GTCTIRTLEKTGYEKSGRGNGVIPL+EAVEVCLIERG+I P ++A    N  P  G     MG T H G      MG++   W+  SG        +  K GW+ G        N +AAA ++     H PP              YGY+   GN   G  G  G    +     +  SQG+G                               DY R      NP L   +  G Y +    Q NN+ A  Y  R D+   EYDPAAV P QR P     +G  WNR
Sbjct:  340 PTTSASPHTA-DPRTSSPSPHSAAPPSSVRPAPAHATTPPGPRNRRRHTSPTKQPTADVPAQYERPFPRGLPKTVKHRPENARVFIGNLASEYTDVAQIIKIFHKYGDLIEEPVLRRSFGFVQYSSAEAASRAVAGEQGRIIGGIGIDLSIADNREVKRGTHVANNTPFGQPAP--AGK-AHARGRVRERDFGSEDRNDKSRKRRRSLSPASAAKKGGVHPPQYRRMRPDPRNGVYLRILCMSPTARSYARQCENTFRSMTGLPADVLHIVAAGLGEALGRAMRDVIPYVMVVASKDVDDGTCTIRTLEKTGYEKSGRGNGVIPLREAVEVCLIERGVIAPQNIAQQM-NGAPRGG-----MGRTGHGGRQGPHGMGSHGRQWNSHSGAHPGNAPVETAKPGWMTGQPRAPHPSNPRAAAGSVAPGIHHQPPHGGVGNVVMPGGA-YGYNGVEGNR--GHYGSHGPGPQAAPVPPHRPSQGYGLVPAQSQGGYEXXXXXXXXXXXXXXGHQNGGDYMRRSGAPVNPAL-GMHPPGGYMDRYRGQVNNQNANSYNGRGDNRESEYDPAAVMPAQRGPNPNYENG--WNR 911          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A1X6NL64 (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL64_PORUM)

HSP 1 Score: 216 bits (551), Expect = 6.620e-54
Identity = 138/326 (42.33%), Postives = 181/326 (55.52%), Query Frame = 0
Query:  342 QPPASASTTSTRNPQGDRPLPRN--LPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGT-----------------HIQNNTPFQHPKPHTAGQF--SQPRGRVRDRDHTGPQPQSVRKRRRSVSP----------NSALRKGGVHPPQYGR--QRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGIIMP 634
            +P    ST   R+   D PL R+  LP     R +N+RVFIGNLASE T+  E+  IF KYG L+E PVLRRSFGFVQ+   EAA+ A+  EQGR +GG+ +DLS+ADNRE+++                               P ++G    S   G    +   GP      KRRRS SP          +  + KG V  P+YGR  QRP  +NGI +R+L M  +++ YA   E + RN  G+N D+++I A  LGE LG A  + IPY MVV+S+D    TCTIRTLE TGYEK G GNGVI + +A+E+  IE G+  P
Sbjct:  315 KPLGKPSTLPGRSGGLDSPLARSSMLP-----RARNSRVFIGNLASEATTEGELASIFSKYGRLMETPVLRRSFGFVQFETPEAAATAISSEQGRSVGGMRVDLSLADNRELRRAAGDGPAGASXXXXXXXXXXXXXXXXXXXXXPPSSGALGASSAGGSAMPQWTRGP------KRRRSASPTPLGGPPPPRSGRVIKGLVRAPEYGRGRQRPQSRNGILVRVLVMGSSSRSYAHTVETSLRNTLGVNTDLVYIEACKLGEGLGLAGSNQIPYAMVVSSKDESGSTCTIRTLEPTGYEKVGHGNGVISVNDAMEIISIEEGLHPP 629          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A7S3EF73 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EF73_9RHOD)

HSP 1 Score: 205 bits (522), Expect = 9.790e-52
Identity = 117/258 (45.35%), Postives = 161/258 (62.40%), Query Frame = 0
Query:  373 PKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERG 630
            P N+RVFIGNLASE  + +E+V++F KYG L+EEPV+RRSFGFVQYS+  AA+ A++ EQG+I+GG  +DLS ADNR+ ++     +N   +H +          RGR       G      RKRRRSVSP +     G       ++RPDP NG+ +RIL M   A+ YA  CE   R++  L+ D   I ++ LGE+L ++    +PYV+VV+SRD E  TCTIRTLE TGYEK+    GVI  +EA++V + + G
Sbjct:  167 PPNSRVFIGNLASENLTKQEVVDVFEKYGRLVEEPVMRRSFGFVQYSSQAAAAEAIRCEQGKILGGRRVDLSFADNRDPRR-----SNDGGRHGR---RDDERDSRGREDRHRRDGGYDNDRRKRRRSVSPRAR----GFGNESGRKRRPDPVNGVKVRILVMGSHARDYASQCEYIIRSLLMLSTDFEQIDSSKLGESLRRSRDQNVPYVIVVSSRDEEKKTCTIRTLEATGYEKAKSEKGVIGFREALDVLVADEG 412          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A7S0FZY4 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY4_9RHOD)

HSP 1 Score: 203 bits (517), Expect = 1.600e-50
Identity = 117/258 (45.35%), Postives = 159/258 (61.63%), Query Frame = 0
Query:  373 PKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERG 630
            P N+RVFIGNLASE  + +E+V++F KYG L+EEPV+RRSFGFVQYS+   A+ A++ EQG+I+GG  +DLS ADNR+ ++      N   +H +          RGR       G      RKRRRSVSP S     G       ++RPDP NGI +RIL M   A+ YA  C+   R++  L+ D   I ++ LGE+L ++    +PYV+VV+SRD E  TCTIRTLE TGYEK+    GVI  +EA++V + + G
Sbjct:  370 PPNSRVFIGNLASENLTKQEVVDVFEKYGRLVEEPVMRRSFGFVQYSSQAPAAEAIRCEQGKILGGRRIDLSFADNRDPRR-----TNEGGRHGR---RDDDRDGRGREDRHRRDGGYDNDRRKRRRSVSPRSR----GFGNESGRKRRPDPVNGIKVRILVMGSHARDYASQCDYIIRSLLMLSTDFEQIDSSKLGESLRRSRDQNVPYVIVVSSRDEEKKTCTIRTLEATGYEKAKSEKGVIGFREALDVLVADEG 615          
BLAST of Ggra5504.t1 vs. uniprot
Match: M2Y4L5 (RNA-binding protein (Nab3), putative n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4L5_GALSU)

HSP 1 Score: 189 bits (480), Expect = 4.700e-46
Identity = 108/270 (40.00%), Postives = 159/270 (58.89%), Query Frame = 0
Query:  365 LPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQ---PQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGI 631
            + K + NRP ++RVFIGNLASE T+  E+V IF KYG LIEEPV+RRSFGFVQY NA++A  A++ EQGR+IGG+ +DLS+ADNR+ ++            P+ H+        G  + R +TG     P     R  ++   +   KG    P+    R D +NG+ +R+L M   A+GYA  CE T R   GL  D+++I A  LG++L  A    +PYV+VV S+D   G+C++R L+  GY+K   G+  +P +E + + + E  +
Sbjct:  236 IAKSSFNRPADSRVFIGNLASERTTVAELVSIFSKYGNLIEEPVIRRSFGFVQYDNADSAYRAIEAEQGRVIGGMPIDLSLADNRDSRRN-----------PRTHSVV------GPDKSRKNTGTDRFNPYERAGRPNTIGRPARQSKGNFRRPR----RFDSRNGVAVRVLVMGQHARGYAHSCEATIRAFLGLQTDVVYIEANKLGDSLELAKEQLVPYVIVVNSKDEREGSCSLRILDFEGYQKVKGGS--LPFREVLNIIVEEEDL 482          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A7V5I4F8 (RRM domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I4F8_9BACT)

HSP 1 Score: 174 bits (441), Expect = 6.370e-41
Identity = 104/275 (37.82%), Postives = 155/275 (56.36%), Query Frame = 0
Query:  363 RNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNR--EVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGI-YLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGIIMP 634
            + LP+       +AR+FIGNLASE TS  E++ IF KYG +IE+P+L RS+ F+QY N E+  +A+++EQGR+IGG  LDLS+A  R  +   G H       +    H +               TGP    V  +R  +  +S  RK      + G  RP P+ G  Y+RIL +  T++  A   +N  R++ G++AD+ +I + +LG AL +A    + YV+VV+S+D   GTC+IRT EKTG+E +G G  +IP  EA+ +   E  I +P
Sbjct:  406 QTLPRRHPEGTNDARLFIGNLASETTSPVELISIFSKYGRIIEQPLLLRSYAFIQYDNPESTQLAIRYEQGRLIGGRHLDLSVASGRRNDSGSGNHGTRRATGREAAAHHS---------------TGP---VVEGKRGPLQQSSGWRKRDAAALETGGPRPPPRPGAPYVRILVIGTTSRSMAHAMQNVIRSL-GISADVAYIFSDSLGTALKEAYAQCVRYVIVVSSKDASKGTCSIRTYEKTGFEYAG-GGSIIPFHEALAIIFREERINLP 660          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A7J7ILX9 (RRM domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILX9_9RHOD)

HSP 1 Score: 165 bits (418), Expect = 4.640e-38
Identity = 100/273 (36.63%), Postives = 153/273 (56.04%), Query Frame = 0
Query:  363 RNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGI-YLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAVEVCLIERGIIMP 634
            + LP+       +AR+FIGNLASE TS  E++ IF KYG ++E+P++ RS+ F+QY   E+  +A+++EQGR+IGG  LDLS+A  R    G+    N    H   H     S P G+           Q + +R+R  S    +  GG  PP        P+ G  Y+RIL +  T++  A   +N  R++ G++ D+ +I +T+LG AL +A    + Y++VV S+D   G C++RT EKTGYE +G GN ++P  EA+ +   E  I +P
Sbjct:  446 QTLPRRHPESTNDARLFIGNLASESTSQVELLSIFSKYGRIMEQPLMLRSYAFIQYDCPESTQLAIRYEQGRLIGGRHLDLSVASGRR-GSGSSSNANANDSH---HLGSAGSGPEGK------RAASNQGMNRRKRDAS---TMDMGGPRPP--------PRPGAPYVRILVIGTTSRPMAHAMQNVIRSL-GISTDVAYIFSTHLGTALKEAYAQCVRYMIVVTSKDASKGACSLRTYEKTGYEHAGGGN-IMPFHEALAIIFREERINLP 695          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A7S0ZI55 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI55_9RHOD)

HSP 1 Score: 150 bits (380), Expect = 1.520e-34
Identity = 97/263 (36.88%), Postives = 141/263 (53.61%), Query Frame = 0
Query:  361 LPRNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRN-MTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAV 622
            LP+N P   K+ P ++R+FIGNLASE+TSA+++VEIF KYGT+IE P +R+S+ F+QY NA++   A++HE GR +  ++ +LSIA  RE K       N+  ++      GQ+ Q                      R ++P S            GR      +   +R+L M P AK Y R C+N   +  + +  D+  I    LG AL  A  + IP VMVVA RD ++ TC++RTLE +GYEK   G   I L +A+
Sbjct:  231 LPKNAPPALKSVP-HSRLFIGNLASEHTSAEQLVEIFGKYGTIIELPTIRKSYAFIQYDNADSVLQAIEHENGRTLHSLSWELSIAGTRERKSA----QNSSDKYRNGSAFGQYPQ----------------------RPITPGSR-----------GRASTAKLDVDRIRVLVMGPQAKPYGRKCQNWLMSRFSPIPVDLAVIDREKLGSALRTAQDEHIPLVMVVAGRDEQSRTCSLRTLEPSGYEKVS-GQAQISLDDAM 454          
BLAST of Ggra5504.t1 vs. uniprot
Match: A0A6T5WAM3 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5WAM3_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 1.140e-24
Identity = 86/262 (32.82%), Postives = 124/262 (47.33%), Query Frame = 0
Query:  361 LPRNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKYGTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNREVKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRSVSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTFRNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRTLEKTGYEKSGRGNGVIPLKEAV 622
            LP+N P   KN P   R+FIGN ASE TSA E+VEIF +YGT+IE+P +R+S+ FVQY + E    A+  E  R   G++ +LSIA  R     T   + +        +AG  ++  G                    + S  + +   GV               + +R++ M   A+GYA            L++D++      L  +L  A    IP V+VVA RD     C++RTLE TGYEK   G   +PL+EA+
Sbjct:  150 LPKNGPSEFKNTP-GTRLFIGNFASEGTSADELVEIFSRYGTIIEQPTIRKSYAFVQYDSPEPVLRAIAAENHRTENGLSWELSIAGTRPAAASTSALSAS--------SAGAAARYSGGT------------------AYSTGAGV---GV---------------VQVRVMAMGTQARGYAERVSRAASERLALSSDVVSTDREQLRTSLRTAQDARIPVVLVVAGRDERTSVCSMRTLELTGYEKVA-GRSELPLEEAL 365          
The following BLAST results are available for this feature:
BLAST of Ggra5504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IZT01.330e-28553.04Heterogeneous nuclear ribonucleoprotein C n=1 Tax=... [more]
R7QA323.540e-13450.51RRM domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1X6NL646.620e-5442.33RRM domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S3EF739.790e-5245.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FZY41.600e-5045.35Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
M2Y4L54.700e-4640.00RNA-binding protein (Nab3), putative n=1 Tax=Galdi... [more]
A0A7V5I4F86.370e-4137.82RRM domain-containing protein n=2 Tax=cellular org... [more]
A0A7J7ILX94.640e-3836.63RRM domain-containing protein n=1 Tax=Cyanidiococc... [more]
A0A7S0ZI551.520e-3436.88Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A6T5WAM31.140e-2432.82Hypothetical protein n=1 Tax=Erythrolobus australi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 377..444
e-value: 8.4E-10
score: 48.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 378..438
e-value: 1.5E-7
score: 31.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 376..448
score: 13.890656
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 368..459
e-value: 2.0E-14
score: 55.4
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 525..629
e-value: 9.0E-9
score: 36.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1074..1099
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1002..1024
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1052..1161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 972..1024
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..492
NoneNo IPR availablePANTHERPTHR13968HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINcoord: 181..523
NoneNo IPR availablePANTHERPTHR13968:SF26NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 3coord: 181..523
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 359..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:615232..618717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5504.t1Ggra5504.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 615232..618717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5504.t1 ID=Ggra5504.t1|Name=Ggra5504.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1162bp
MSASHTSAQNANSTSLLQNPSGIVSHVRALPQQPSLETRSLPEPDETQQQ
LPVAQSSPQEPKVPVSPTTPTNNPSISISPNAVDDVPNSPATQQNPNPSL
SAPAPVQIDARSPSHAPPASPNTDLAAAKTDPGAQMLSASNETVSKVDMS
PPPNAMAAPSCPVSVNPSSPNTQPTMPEQKNIAKGPEQAGSHSLQGDDAQ
NFAAHEAKQSADVSFVQHTQSTTPSKVAASVLPPPLHHSPEESNDLPHNS
TVEQTVHSLQHPHAAQSTPDPTTQPMQSVTQGTVDSQNAVDPKTGDRGKD
QPSAAAPPTSISQPATSLRNDLEASASHSVRNAPQTSGTQPQPPASASTT
STRNPQGDRPLPRNLPKFAKNRPKNARVFIGNLASEYTSAKEIVEIFHKY
GTLIEEPVLRRSFGFVQYSNAEAASMAVKHEQGRIIGGIALDLSIADNRE
VKKGTHIQNNTPFQHPKPHTAGQFSQPRGRVRDRDHTGPQPQSVRKRRRS
VSPNSALRKGGVHPPQYGRQRPDPKNGIYLRILCMSPTAKGYARHCENTF
RNMTGLNADILHIVATNLGEALGKAMRDAIPYVMVVASRDVEAGTCTIRT
LEKTGYEKSGRGNGVIPLKEAVEVCLIERGIIMPNSVANHYTNPGPVQGN
MGVNMGNTMHPGVGVNSAMGNNRPAWSMQSGMSSQDGKSGWVNGSRVPRG
GRNIQAAAPNMGNLPMHPPPPPSMSNVANGGNGGYGYDMHPGNTTYGQVG
MSGGRDDSYARQDYIGSQGFGADYNRNPQLYNTNGVGTYPEEQYNQTNNR
GAYGNRTDHEYDPAAVTPTQRPGAAMGDGYAWNRSSGGRGVGYGAMTGGT
NAPNQQRMGASYSTGGQYSNQEYSENQYQGQGQVQYGSSYDSRTPYANAG
TNNTQGYGTYGTSGGSYGHGNETREQYGSHSYNARYGQGRGNSQYRNSGW
NETGAPRPMNNPMGGYYNASNTMNRSGGTRGQAETAPENRYLEYDYGRNN
ANSEYGGPQGYGNRQSAGTSGGNAAGGNASALNTGVDIGRLNHLISAFQQ
KQAAQGVSQDGGSRAMQRMGARRDGVPPPPPPLPSASGAPAPPVPPQNVS
HLLSVPGVQQALQHIGGGRLGSYPMPPKGSSGFTGGPYHGNPQHGSPPQG
GRRGPGYYQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR036621Anticodon-bd_dom_sf
IPR035979RBD_domain_sf