Ggra5494.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5494.t1
Unique NameGgra5494.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1446
Homology
BLAST of Ggra5494.t1 vs. uniprot
Match: R7QA78 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA78_CHOCR)

HSP 1 Score: 139 bits (349), Expect = 2.400e-29
Identity = 165/529 (31.19%), Postives = 233/529 (44.05%), Query Frame = 0
Query:  527 RRRAYGQRPDYDGPTENETREEWLDRRRKKTETRDAVRFVIEQIINRAVYGDRRRGRRVYSRRPGPSSSQGSRIKRDSTKRESLDDMVNSTSSANLEVSNSRKQEKAPANSTTTSLNTALNPQNVSLRDKDVDPHIDGKDEDITTTATPSVSKPTQSF---PFQEETPRQAPQRRAAPAPLRPAPWAPIISDAKMQ-QNVISPVTAQVRAEAAQHAAKALRTGNRSAQQSGESLGLHVSSSSSPKAVEMLATGSHVQGSTQSEHSLAESDMTLIPVKGSLPHESSNNRVDQSFAHSTVNRLATSNCYKEDSVTIPPTLGGNVKVLMKPNTRRDPGKEGQG--YVLSQNGNIARTLHDSSHNIRSEVERNRSAPRRGRGGKSEFSRRSRREYSSRSDEVAMNVDKRPSLADVNAKLPRGNTG-ERTREGVEQDDGEESRAWAEGSRTSPP-SFDEITRAFLNQPAAFPLVGAPLLPSVPVVPVLSACPPAGSSSSYGNVSN--AWSENKQWQPSERQAEHVPSQWWKAST 1045
            RR  Y  R +YDGP  NE+RE+WL+RRR++TE R+ V+ +++  ++RAVYG +   +R Y RR    S+Q  R K  +  R        S  S   E +  +    APA S     N+A  PQ                            S+P Q+    P              APAPLRPAPWAP    +  + +NV    T  +  +A+    K      R +Q S  SL      SS P   +        +  + + H    +   +IPVK S           QS   S  +R       + DSVTIP   GG ++V+ +P+  R   ++G G   VLS   N+      +  N     ++ R APRR RGGK +  RR RR    +SD+           A  + +  RG  G   T   +  D  +ES AWA  +    P SFD ITRAF NQPA FPLVGAPLLP       +S   P   S+S  N SN  AW+ +  W  ++++   V + WW++ +
Sbjct:  150 RRHPYRAR-EYDGPAANESREQWLERRRRETEIRNVVKSILQMCVHRAVYGIKPGPKRPYGRRGSSQSAQHPRRKDYNRPR-----WTGSPGSKTPESAPGKPSAPAPAASPEVRRNSASKPQ----------------------------SRPQQAALAKPLPAXXXXXXXXXXVAPAPLRPAPWAPKAPGSSPETKNVHGSRTEGLPVDAS----KIEDWSMRQSQVSSPSLDPTPMQSSVPSRQQP-------RSRSGAGHVPPSAVRNIIPVKAS-----------QSSKASGADRQL-----EVDSVTIPAPSGG-IRVVQRPDRGRGANRQGPGGSAVLSNGKNLLSGAAVTPAN--GPFDKPRYAPRR-RGGKLDVPRRDRRAPYRKSDD-----------ARASGEDQRGGYGVPLTSHSIPLDAKQESEAWAANNGPKQPASFDAITRAFSNQPAPFPLVGAPLLPLXXXXXXIST--PDEGSASTANDSNRGAWNASGTWTGTQKE---VKTDWWQSKS 597          
The following BLAST results are available for this feature:
BLAST of Ggra5494.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QA782.400e-2931.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 737..765
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 669..690
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 743..765
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1218..1233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1069..1084
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 654..668
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1256..1270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..560
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1022..1445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1320..1361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1369..1408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1279..1301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 863..877
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..707
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1104..1120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..965
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 939..959
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..560
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..651
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1159..1203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 878..923
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1421..1445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:458075..462631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5494.t1Ggra5494.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 458075..462631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5494.t1 ID=Ggra5494.t1|Name=Ggra5494.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1446bp
MKRQSYLGPNRRLPKAPLPFNLPSLRREAGGDGAGGGIAGAGAKWASPRA
EAVEETREEEKHDERSAGSKTAWGGAGLRVRTQPDFPELSRPSVPPLGNA
AKSAKKTEETKAGRDTEEKPETHAAQPSTSSTSTTAKPDMEEDDWAEDDN
GMDFTAEVSLPEVNIPDVPPPPPRKAPSLPHSPTPLAPRFIPGHGYQRRN
VVPPPAAHWAHAIKLQQMDRMGDSRGRPTPRMRQPEVAAGSTPSGIDLKL
LEEQKTIMKTKAELAQEARRKEEAERERIQKERAQKKLRELEERLRLKEE
RRRAGGQAVSRKQGSSSTDPAGSRRSSVHTAPPADISGKADRRNTGLKAR
TASGVPEHESSRRVVLQRPREETEQPISREGAEHVTSEQGRDGTRGVLAT
EEKAAETSAVESSNIKDSLPATASFQESTSTETPAQTSASTYAVPTPQSS
RRNGRSTVTSHVTTEAPTPHALPVSSTAGRVRSSSRSLEPTSNGYERRRS
SPSRRERSHRYIPQESRGHEYGSYGRRRRAYGQRPDYDGPTENETREEWL
DRRRKKTETRDAVRFVIEQIINRAVYGDRRRGRRVYSRRPGPSSSQGSRI
KRDSTKRESLDDMVNSTSSANLEVSNSRKQEKAPANSTTTSLNTALNPQN
VSLRDKDVDPHIDGKDEDITTTATPSVSKPTQSFPFQEETPRQAPQRRAA
PAPLRPAPWAPIISDAKMQQNVISPVTAQVRAEAAQHAAKALRTGNRSAQ
QSGESLGLHVSSSSSPKAVEMLATGSHVQGSTQSEHSLAESDMTLIPVKG
SLPHESSNNRVDQSFAHSTVNRLATSNCYKEDSVTIPPTLGGNVKVLMKP
NTRRDPGKEGQGYVLSQNGNIARTLHDSSHNIRSEVERNRSAPRRGRGGK
SEFSRRSRREYSSRSDEVAMNVDKRPSLADVNAKLPRGNTGERTREGVEQ
DDGEESRAWAEGSRTSPPSFDEITRAFLNQPAAFPLVGAPLLPSVPVVPV
LSACPPAGSSSSYGNVSNAWSENKQWQPSERQAEHVPSQWWKASTRAMGG
DVTRENRDPTYREIVPPADQSDNYDREEKAEVADSIAIRSATSNQGPMDK
HGHPVKTRSRKPHRNTRKPKRGFAGSAEKARQNSNEDLLAGSGSVDKDAL
KVAKPHVDSFDQTSRTLPQVGSHSLASGESHLAVRPSSSNQTVEVTTTAQ
LEAIIPKQAGKEQNVPRIAEGETSHESADDKIQSNKSTTRPWSAGKMANK
KSPDTPIVPRKPRRSAPRDLRDTYVGANGNPNDLGSEDQRRSTTQTSKPR
GADVVNIPAKGGQTGNRSGDDGHHVGKTNEANSEERSIAFRKPPRNSKNE
FYEKRSSEQTGAVKDLDVVNRTKTSTAKESAGSNGSQVTPNASSPSSSNI
NTVNELNSNRMGKEHEKSTFGNSLDANGQGNRNFHTTSNGAVKPT*
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