Ggra5488.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5488.t1
Unique NameGgra5488.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length190
Homology
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A2V3J0R9 (Calcium load-activated calcium channel n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R9_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 9.050e-101
Identity = 150/185 (81.08%), Postives = 175/185 (94.59%), Query Frame = 0
Query:    1 MTLADAYGAFSIVGIVSVSTLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKSRMDAARMAAKQQRK 185
            MTLADAYGAF IVGIV+V+TLLAEL SY+LVY+T+DYVR C+RVRELNKKL+KEDRK+VSVEKRKSHEK++DR+EEELKQASQKMDGLK+RS++LIG++FL LYRMVAA+WTGHVVARLPFLPIK+IQ LSFRGL+G DYYQCSFGFIYTL TMGIK+NIP+LLGFT PKS ++ +RMAA+QQRK
Sbjct:    1 MTLADAYGAFVIVGIVTVATLLAELLSYLLVYSTKDYVRACDRVRELNKKLEKEDRKVVSVEKRKSHEKSIDRLEEELKQASQKMDGLKMRSSVLIGLSFLLLYRMVAAAWTGHVVARLPFLPIKIIQALSFRGLQGNDYYQCSFGFIYTLCTMGIKSNIPKLLGFTSPKSILNPSRMAARQQRK 185          
BLAST of Ggra5488.t1 vs. uniprot
Match: R7Q8H6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8H6_CHOCR)

HSP 1 Score: 228 bits (582), Expect = 1.700e-73
Identity = 116/186 (62.37%), Postives = 149/186 (80.11%), Query Frame = 0
Query:    1 MTLADAYGAFSIVGIVSVSTLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKSRMDAARMAAKQQRKS 186
            MTLADAYGAF+I GIV  +TL AE  +++LVY+T+ Y + C+RV+ELNK+L K D K+VSV+KRK H+K ++ IE++LK ASQ MD +KLR +IL G++F FLYR+VAA+WTG VVARLPFLP K IQ  + RGL G+D Y CSFGFIYTL T+GIKANIP+ +G  P KS  +A+RMAA+QQ+KS
Sbjct:    1 MTLADAYGAFAIAGIVVCATLCAEFLTWMLVYSTDQYKKACDRVKELNKQLAKADAKVVSVDKRKKHDKLIESIEDDLKVASQSMDAVKLRGSILTGISFFFLYRVVAAAWTGVVVARLPFLPFKFIQTFASRGLDGKDKYSCSFGFIYTLCTIGIKANIPKAIGAVPVKSAFNASRMAARQQKKS 186          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A7S0ZBL7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBL7_9RHOD)

HSP 1 Score: 113 bits (282), Expect = 3.780e-28
Identity = 60/167 (35.93%), Postives = 106/167 (63.47%), Query Frame = 0
Query:   12 IVGIVSVSTLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMV---AASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKSRMDA 175
            I+G+V + T   E  S+ ++Y T++Y R   R++ELN  L+KE   +V+++KRK+HEK V R+EE+LK A+ ++   K + NI + + ++ +Y  +     + +G  + ++PF P+ + +    RG++ ED  +  F F+Y +S+M +KANI + LGF+PP+S  DA
Sbjct:    8 ILGLVVLMTFSVEGLSWYVLYRTDEYKRNSLRIKELNVNLEKEKSTLVALDKRKAHEKKVARLEEDLKAATAELSRSKFKLNIFVSMCYMVMYYYLNNYVFNNSGP-IGKVPFEPMFMAKSFVHRGIQSEDVKEIGFAFMYAISSMSVKANIQKALGFSPPRSNFDA 173          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A1S3JMC1 (Calcium load-activated calcium channel n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JMC1_LINUN)

HSP 1 Score: 111 bits (278), Expect = 1.250e-27
Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 0
Query:   15 IVSVST-LLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKS 171
            I+S+ T L+ E  +++LVY TE Y R    V + +KKL+K   K  S E  +S +K ++R EE+LK  ++ +  +K++S   IG AF  L  M  + + G VVA+LPF+PI  +Q +S R L G+DY  CSF F+Y +STM I+ NI +LLGF P ++
Sbjct:   10 IISICTALMGEGLTWLLVYRTEYYQRLKVEVEKASKKLEKT--KEYSNEADRSQKKKIERQEEKLKNNNRDLSMVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFIPITWLQGISHRNLAGDDYSDCSFIFLYIVSTMSIRQNIQKLLGFAPSRA 165          
BLAST of Ggra5488.t1 vs. uniprot
Match: D6WNP6 (Calcium load-activated calcium channel n=21 Tax=Endopterygota TaxID=33392 RepID=D6WNP6_TRICA)

HSP 1 Score: 111 bits (277), Expect = 1.810e-27
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 0
Query:   19 STLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKS 171
            + LL E  ++++VY TE Y +    V   +K+L+K  ++       K H+K ++R EE LK  ++ +  +K++S   IG AF  L  M  + + G VVARLPF+P+  IQ LS R L G+DYY CSF F+Y L TM I+ NI +LLGF P ++
Sbjct:   15 TALLGEGLTWLMVYRTEKYQKLKTEVERQSKRLEKR-KEAHGDSLDKQHKKKIEREEERLKNNNRDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVARLPFMPLTWIQGLSHRNLPGDDYYDCSFIFLYILCTMSIRQNIQKLLGFAPSRA 166          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A6F9DVW7 (Calcium load-activated calcium channel n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DVW7_9ASCI)

HSP 1 Score: 111 bits (277), Expect = 1.900e-27
Identity = 62/160 (38.75%), Postives = 100/160 (62.50%), Query Frame = 0
Query:   12 IVGIVSVSTLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKS 171
            IV I  ++ LLAE  ++++VY TE + +  + V   +KKL+K    +      K+ ++ ++  EE+LK  S+ +  ++++S   IG  F  L   +++ + G VVA+LPFLPI L Q +S RGL G+D+  CSF F+Y LSTM I+ NI +LLGF+P ++
Sbjct:    8 IVFISVITALLAEGLTWLMVYRTEKFQKLKQEVERQSKKLEKRKEAMGEAAANKNQKRRLNIEEEKLKSNSRDLSAVRMKSMFAIGFCFTALLGTLSSVFEGKVVAKLPFLPISLFQGISHRGLMGDDFTDCSFIFLYILSTMSIRQNIQKLLGFSPSRA 167          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A3M7RP28 (Calcium load-activated calcium channel n=2 Tax=Brachionus TaxID=10194 RepID=A0A3M7RP28_BRAPC)

HSP 1 Score: 110 bits (276), Expect = 2.910e-27
Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 0
Query:   19 STLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKS 171
            + LL+E FS++L+Y TE Y R    +   +KK++K+   +      K+H+K ++R EE+LK  ++++  +K++S   I  AF+ L  M  + + G VVA+LPF PI  I+ +S R L GEDY  CSF F+Y LSTM I+ N+ ++LG  P ++
Sbjct:   15 TALLSEGFSWLLIYRTEKYKRLQAEIERQSKKIEKQKESLADASD-KNHKKRLERQEEKLKLNNRELSMVKMKSMFTISFAFMALLSMFNSIFEGRVVAKLPFEPISWIRGISHRNLNGEDYTDCSFLFLYILSTMSIRQNLQKILGVEPSRA 166          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A5J4Z0K6 (Calcium load-activated calcium channel-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0K6_PORPP)

HSP 1 Score: 110 bits (276), Expect = 3.310e-27
Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = 0
Query:   20 TLLAELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHV-VARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKSRMDA 175
            TL+ E  S++ VY T+D+ R   R+ ELN+K+ KE   IVS+++RK HEK + R+EE+LK A++ ++ LKLR  I + + +   Y  +     G   +AR+PF P+   +    RGL   D  +  FGF+Y +S+  IK+N+ +LLG  PP+S   A
Sbjct:   19 TLVVEGVSWLAVYRTDDFKRASARIVELNEKVAKEKELIVSIDRRKVHEKKIARMEEDLKSANEAVNKLKLRVTIFVSLCYAAAYYYLNNFVFGKTALARVPFEPVSFFKGFVSRGLNSNDLQEVGFGFLYAISSTAIKSNMTKLLGHAPPRSSYSA 175          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A6G1SGL1 (Calcium load-activated calcium channel n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SGL1_9ACAR)

HSP 1 Score: 108 bits (271), Expect = 1.160e-26
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 0
Query:   15 IVSVSTLLA-ELFSYVLVYNTEDYVRTCERVRELNKKLDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPKS 171
            ++S ST  A E  ++++VY TE+Y R    V +  KKLDK    I  +   KS ++ +DR EE LK  ++ +   K++S   +G  F  +  M  + + G VVA+LPF+P  +IQ LS R L+G D   CSF F+Y LSTM ++ANI + LGF PP+S
Sbjct:   12 LISFSTASAGEFLNWLMVYRTENYKRLKAEVEKQGKKLDKRKENIGELVD-KSLKRKLDREEERLKANNRDLSMAKMKSMFFVGFVFTAILGMFNSIFHGRVVAKLPFIPFSMIQNLSHRNLEGTDMSDCSFIFLYILSTMSLRANIQKCLGFAPPRS 168          
BLAST of Ggra5488.t1 vs. uniprot
Match: A0A164X6L5 (Calcium load-activated calcium channel n=2 Tax=asterids TaxID=71274 RepID=A0A164X6L5_DAUCS)

HSP 1 Score: 108 bits (270), Expect = 2.610e-26
Identity = 55/162 (33.95%), Postives = 97/162 (59.88%), Query Frame = 0
Query:   11 SIVGIVSVSTLLAELFSYVLVYNTEDYVRTCERVRELNKKLD--KEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAFLFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYTLSTMGIKANIPRLLGFTPPK 170
            ++VGI   + ++ E  S++L+Y T  Y      + + +KKL+  K D     +  +KS  K +DR+E  LK++S+ +   K +S  ++ +    ++  +   + G  VA+LPF+PIKL+Q +S RGL+GED+  CS  F+Y L ++ I+ N+ + LGF+PP+
Sbjct:   16 TVVGISICTAIVCEAISWLLIYRTSSYKSLKSTIDKASKKLETMKTDPTAPKISAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGFLNNLFEGKAVAKLPFVPIKLVQKMSHRGLQGEDFTDCSMAFLYFLCSISIRTNLQKFLGFSPPR 177          
The following BLAST results are available for this feature:
BLAST of Ggra5488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0R99.050e-10181.08Calcium load-activated calcium channel n=1 Tax=Gra... [more]
R7Q8H61.700e-7362.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZBL73.780e-2835.93Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1S3JMC11.250e-2742.41Calcium load-activated calcium channel n=1 Tax=Lin... [more]
D6WNP61.810e-2741.18Calcium load-activated calcium channel n=21 Tax=En... [more]
A0A6F9DVW71.900e-2738.75Calcium load-activated calcium channel n=1 Tax=Pha... [more]
A0A3M7RP282.910e-2739.22Calcium load-activated calcium channel n=2 Tax=Bra... [more]
A0A5J4Z0K63.310e-2738.85Calcium load-activated calcium channel-like n=1 Ta... [more]
A0A6G1SGL11.160e-2641.14Calcium load-activated calcium channel n=1 Tax=Ace... [more]
A0A164X6L52.610e-2633.95Calcium load-activated calcium channel n=2 Tax=ast... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 8..168
e-value: 6.8E-13
score: 58.8
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 15..166
e-value: 8.6E-19
score: 67.9
IPR008559Calcium load-activated calcium channelPANTHERPTHR20917PNAS-RELATEDcoord: 10..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:446114..446827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5488.t1Ggra5488.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 446114..446827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5488.t1 ID=Ggra5488.t1|Name=Ggra5488.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=190bp
MTLADAYGAFSIVGIVSVSTLLAELFSYVLVYNTEDYVRTCERVRELNKK
LDKEDRKIVSVEKRKSHEKAVDRIEEELKQASQKMDGLKLRSNILIGVAF
LFLYRMVAASWTGHVVARLPFLPIKLIQPLSFRGLKGEDYYQCSFGFIYT
LSTMGIKANIPRLLGFTPPKSRMDAARMAAKQQRKSNME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008559TMCO1