Ggra5485.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5485.t1
Unique NameGgra5485.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1151
Homology
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A2V3J0U8 (Telomere repeat-binding factor 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0U8_9FLOR)

HSP 1 Score: 471 bits (1213), Expect = 3.290e-143
Identity = 410/1171 (35.01%), Postives = 588/1171 (50.21%), Query Frame = 0
Query:    1 MSASAIPPDARSSEQPPSSSQPLA-QPLRLGPHSTQPNRLTDTPRARRPLSASHAARGESISLARRAAAVAKKKRERARAHFEQQGFGTNLDNVLRDYVAANASTRQNVSQTKAKRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSKSVKTADKQHSRASSSVPLQSTPSTCTPASTPRMRS-EPSLPIPLRSTAGPSI--VQPPRVSQKLAFPSLPAI----QIHRSHAQRSLLHSKQIEPELVSPMAGVRRAQTLPQTHHSENLPVYGYHQMVRSRPFQEPNESIRASNLSGFHLHSSPGMAKNPSAESRPMAVPIRLEHRSLISPGNVSLLSSGGGAPHDPTFARSLEERTLPHVHPNF----GPRADQRASDVIHHASAVHPIRTSHPQQFEAVSHAYSSSALHISQELPVSTPVTQRSYGMNREERLQPVRFLGAPIHQGHTYPHQPVVQNVVTESNQFRPLHSMKERNISEPTNEIYPVPSDDNAGQDISSRYARYIPREPRPDSQRDVHVPRPNRQSLEEVAQNHRGDVNHQEHSEVRNLRDSDLGPRGRPRMIVSESLDGDTH-LRATNSENRFTHHQTEDEQDHYIRASGNDVQFGSRQGDG--EAHQRTSSPSDSQYSQDDHDINRSGLDHSVANIHMGVGDQQPALVQTGTGECIHNEDSMHQVEVPREVLDNDDDDADDDHISH-PHTDPNGTNLYHANDDEDD-QLTPHHPFSLVNHDVGPSEDGEARDDS----HTLGLSEPQQ--GIDLQVRLVEEPQDC-YVPERPRSPSMDLEQRSHGQHLSPFS--ARDEKMKSTQLGVIVESQRAGHSLGQGRDRGAPSGPQRAKSEKQITNNLSRSGESLRFTDRDSPDNCTG-HGGFYAGRDDENGYRDRRVIARIFDKDPDVH-------QLDSSARERSVAGEINE-----LPGNGNGMISNESEFMRKRDFKEENEEIGNDRL-DGTDTRGMLAAGAYMNRDGMRRGSPLSQPAGLRLHNSNEEDSTLDVQNRSSFDGKNVPVNPSSSDSSREVIPLVNAAHTFKVKRIKPITQRREKVLVSEGQGGA-ERELPASLRRDHGVPIEHDKSVMRNRKADTDQEGCEENSLTTGGRHRVEAGASLANLLNPTSLDCGPGSNAYNR 1130
            MSASA+PP+ARS++   S++  L  Q  +       PNR     R+R+  SA+H ARG+SISLARRAAAVAKKKRE ARA FE+QG GT +DNVLR+YV+ANASTR NVSQ K++R KRIKWT  EV ALR GVQK+GEGRWAVILRENAD F+PVRISVDLKDKWRNLSKS K +     R + + P QS P            S  PS    + S + P+   VQ  ++  K AF +LP I    Q+H+   Q + +  K   P + +    V   + +P+ H S+NLP + Y  + R+ P  +P + ++ S  S  ++++S  +  + + E +  A         L++P +VS L     +  +  F R  +     H   +     G R   R + V+HH  + + I  +  Q + +V+  Y+  ++  +    V      RSYG++     +  +    P      + HQP  Q + +E++ FRP+H  KE   S+P      +   + +   + SR+  Y P   R   +RD +  RP R   E +  +   + +H E+      RD     R   + I+ +S D   H LR  +S+NRF     E+   H IR +  + +F   Q +   E   R SS S S++ +DD +  +  L+HS  NIH+G+  QQ  LV+TG GE IHNEDSM  VEVPREVLDND++D  +D I   PHTDPN  NL+H +DDEDD QL P HPF LVNH+  P++D    D      + LGL++ QQ   + L VR++E+     Y  +R R       +  H +    F   AR+E  K +Q    VE+    + + + ++R A +  Q    + Q    + RS    RF      DNC+  HG     RD   G   R V A +      V        QL S AR+  +  E  +     +  N + +   +S+   +    E  E   + R+ DG         G+  +   ++R    S+  G R+HN+       +V    S   +++  N S SD+SRE+IPLVN A TF+V RIK     R+K   S G   A +R+         GV I         R     Q   +E    + GRHRVE  AS+ANLLNP  LD    +NA+ R
Sbjct:    1 MSASALPPEARSADHSVSATPQLTPQQPKXXXXXXXPNRSPPLSRSRKCSSANHTARGQSISLARRAAAVAKKKREHARAQFERQGLGTGIDNVLRNYVSANASTRPNVSQNKSRRHKRIKWTEGEVQALRSGVQKHGEGRWAVILRENADRFHPVRISVDLKDKWRNLSKSNKISMP---RPAPNAPTQSAPPPIAXXXXXXXSSLRPSARSTIASWSEPASTPVQSSQLHHKPAFRALPGIAASHQLHQQSPQANFISPKVSLPHVANQTPDVSSTRLVPRPHRSDNLPQFHYPSVSRALP--DPFDGLQTSGASAVNINTSSQLGSHSATEPKVAA---------LVNPQSVSALVRR--SQDENHFTRHQDALRPTHARTSISVDVGIRQSHRPTGVMHHTPSSNSIPPARSQPYASVAQLYTPGSVVTTGSQQVVPGPVSRSYGIHHNGSTRAPKPSATPFSPSVVH-HQPATQPLESETHHFRPVHEAKEP-ASDPHQTGQSLAHHEESNHGLGSRFRPYGPAVQRNLPRRDSNASRPLRLKPEVLPTHSGQEDSHSENPSKLRERDDVTSARIHSQNIIGQSDDNSMHHLRPIHSDNRFGQEPREELNTH-IRVTAPEDRFVPDQHESGEELPHRRSSHSGSRFDRDDDEDVQDDLEHSSGNIHLGIDGQQQELVRTGEGEDIHNEDSMRHVEVPREVLDNDEEDPTEDDIDRRPHTDPNHPNLFHGSDDEDDDQLAPPHPFGLVNHE-DPNDDVPRVDSQQQPVNALGLTDGQQENAMGLHVRIIEDTSSGDYGTDRNRDQISSTAEPDHEEDRPHFGSLARNESGKGSQCSDTVENDSHRNLVAKRKERVATNEYQHHSKDIQTGQTVVRSIGGARFGRHSQSDNCSSAHGSEQRSRD--VGPAGRTVSALVGGSVNHVRHIIGGVSQLSSDARDGELNDESQDFSACAMQSNDSDLGPQKSQLGAEAHLDEAGEANESQRMMDGRAVSITTRPGSARSYGFIQRSHRDSRLFG-RVHNA--AGDMAEVSEELSPHSRDLSGNASGSDTSREIIPLVNPASTFQVTRIKSSVPGRDKP--SNGSCYAFDRDQALGHSIYSGVGIGRVSDATEGRGVGGHQRYGDEGKEESEGRHRVEDVASVANLLNPDCLDQSTYANAHKR 1144          
BLAST of Ggra5485.t1 vs. uniprot
Match: R7Q7E6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7E6_CHOCR)

HSP 1 Score: 108 bits (269), Expect = 3.450e-20
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0
Query:   90 LDNVLRDYVAANASTRQNVSQTKAKRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSKSVKT 174
            +D+VL   +  +ASTR NVSQ K KR KR++W+  EV ALR GV +YG+GRWAVILRE A+ F+P RISVDLKDKWRNL KS KT
Sbjct:    1 MDDVLAGLIGCSASTRANVSQNKGKRAKRVRWSQPEVCALRTGVARYGQGRWAVILREFANDFHPCRISVDLKDKWRNLFKSQKT 85          
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A7S3TFS5 (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TFS5_EMIHU)

HSP 1 Score: 64.3 bits (155), Expect = 1.610e-8
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   98 VAANASTRQNVSQTKAKRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSK 170
            VA  A T     Q+K  R   ++WT +EV+ L+ G QKYGEGRWA ILRE    F+  R +V LKDKWRNL+K
Sbjct:   58 VAKQARTGGKQPQSKCGR---LRWTSEEVEQLKRGYQKYGEGRWADILREFK--FHKHRTNVHLKDKWRNLNK 125          
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A2V3IUB0 (Telomere repeat-binding factor 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUB0_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 8.060e-8
Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 0
Query:  115 RQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSKSVKTA 175
            R+K ++W+ +EV+AL  GV+ +G G+WA ILR ++ +FN VR SVDLKDKWRNL+  V+ A
Sbjct:   17 RRKTVRWSNREVEALLAGVRTHGVGKWARILR-HSPVFNGVRTSVDLKDKWRNLTSPVRAA 76          
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A7C9A9Q5 (Uncharacterized protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A9Q5_OPUST)

HSP 1 Score: 67.0 bits (162), Expect = 1.410e-7
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0
Query:  114 KRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSK 170
            +R+ R KWTP+E DALR GVQK+G+G W +IL    ++F   R  VDLKDKWRN+++
Sbjct:  473 RRRTRKKWTPEEEDALRTGVQKFGKGNWKLILHSYREIFRE-RTDVDLKDKWRNMTR 528          
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A7S0KDI4 (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KDI4_MICPS)

HSP 1 Score: 65.5 bits (158), Expect = 2.280e-7
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  118 RIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLS 169
            RI WT +EV+ALR GV K+G+G W  IL E   +F   R +VDLKDKWRN+S
Sbjct:  299 RISWTDEEVEALREGVNKHGKGNWKAILVEKRHVFQQERTTVDLKDKWRNMS 350          
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A6I9U844 (telomere repeat-binding protein 2-like n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U844_SESIN)

HSP 1 Score: 65.5 bits (158), Expect = 3.460e-7
Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  114 KRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSK 170
            KR+K  KW+  E D LR GVQKYG+G W VIL    D+F   R  VDLKDKWRNL++
Sbjct:  390 KRRKARKWSTLEEDTLRAGVQKYGKGNWKVILTTQRDIFEG-RTEVDLKDKWRNLTR 445          
BLAST of Ggra5485.t1 vs. uniprot
Match: uncharacterized protein LOC123213822 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA6531 (uncharacterized protein LOC123213822 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA6531)

HSP 1 Score: 65.5 bits (158), Expect = 3.640e-7
Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  113 AKRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNL 168
            AKR+K+ +W+ +E +ALR GVQK+G G W +IL+ N D F+  R  VDLKDKWRN+
Sbjct:  405 AKRRKKKRWSLEEEEALRKGVQKFGSGNWKLILKSNQDTFSE-RTEVDLKDKWRNM 459          
BLAST of Ggra5485.t1 vs. uniprot
Match: A0A2Z7C2Q7 (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7C2Q7_9LAMI)

HSP 1 Score: 65.5 bits (158), Expect = 3.760e-7
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  114 KRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPVRISVDLKDKWRNLSK 170
            KR+K  KW+P E D LR GV+KYG+G W VIL    D+F   R  VDLKDKWRNL++
Sbjct:  418 KRRKIRKWSPLEEDTLRTGVEKYGKGHWKVILTAYHDIFED-RTEVDLKDKWRNLTR 473          
BLAST of Ggra5485.t1 vs. uniprot
Match: uncharacterized protein LOC114712251 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3954F (uncharacterized protein LOC114712251 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3954F)

HSP 1 Score: 64.7 bits (156), Expect = 7.570e-7
Identity = 29/58 (50.00%), Postives = 44/58 (75.86%), Query Frame = 0
Query:  114 KRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENADLFNPV-RISVDLKDKWRNLSK 170
            KR+++++W+ +E DALR GV+K+G+G W  ILR  +++F    R  VDLKDKWRNL++
Sbjct:  482 KRKRKVRWSSEEEDALRAGVKKFGKGNWKPILRFYSEIFTKTGRTEVDLKDKWRNLTR 539          
The following BLAST results are available for this feature:
BLAST of Ggra5485.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0U83.290e-14335.01Telomere repeat-binding factor 5 n=1 Tax=Gracilari... [more]
R7Q7E63.450e-2064.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3TFS51.610e-852.05Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A2V3IUB08.060e-854.10Telomere repeat-binding factor 5 n=1 Tax=Gracilari... [more]
A0A7C9A9Q51.410e-754.39Uncharacterized protein n=2 Tax=Opuntia streptacan... [more]
A0A7S0KDI42.280e-757.69Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A6I9U8443.460e-757.89telomere repeat-binding protein 2-like n=1 Tax=Ses... [more]
uncharacterized protein LOC123213822 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA65313.640e-755.36uncharacterized protein LOC123213822 n=1 Tax=Mangi... [more]
A0A2Z7C2Q73.760e-757.89Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
uncharacterized protein LOC114712251 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3954F7.570e-750.00uncharacterized protein LOC114712251 isoform X1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 117..171
e-value: 2.7E-7
score: 40.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 113..169
score: 7.537855
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 120..168
e-value: 6.3E-7
score: 29.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 113..173
score: 11.512457
NoneNo IPR availableGENE3D1.10.246.220coord: 121..194
e-value: 1.6E-17
score: 65.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1130..1150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 973..1020
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..876
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 574..607
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1122..1150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 841..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 982..1020
NoneNo IPR availablePANTHERPTHR46993:SF6MYB TRANSCRIPTION FACTORcoord: 108..171
NoneNo IPR availablePANTHERPTHR46993MYB TRANSCRIPTION FACTORcoord: 108..171
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 119..170
e-value: 1.64102E-17
score: 75.2963
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 115..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:430103..433555 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5485.t1Ggra5485.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 430103..433555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5485.t1 ID=Ggra5485.t1|Name=Ggra5485.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1151bp
MSASAIPPDARSSEQPPSSSQPLAQPLRLGPHSTQPNRLTDTPRARRPLS
ASHAARGESISLARRAAAVAKKKRERARAHFEQQGFGTNLDNVLRDYVAA
NASTRQNVSQTKAKRQKRIKWTPQEVDALRCGVQKYGEGRWAVILRENAD
LFNPVRISVDLKDKWRNLSKSVKTADKQHSRASSSVPLQSTPSTCTPAST
PRMRSEPSLPIPLRSTAGPSIVQPPRVSQKLAFPSLPAIQIHRSHAQRSL
LHSKQIEPELVSPMAGVRRAQTLPQTHHSENLPVYGYHQMVRSRPFQEPN
ESIRASNLSGFHLHSSPGMAKNPSAESRPMAVPIRLEHRSLISPGNVSLL
SSGGGAPHDPTFARSLEERTLPHVHPNFGPRADQRASDVIHHASAVHPIR
TSHPQQFEAVSHAYSSSALHISQELPVSTPVTQRSYGMNREERLQPVRFL
GAPIHQGHTYPHQPVVQNVVTESNQFRPLHSMKERNISEPTNEIYPVPSD
DNAGQDISSRYARYIPREPRPDSQRDVHVPRPNRQSLEEVAQNHRGDVNH
QEHSEVRNLRDSDLGPRGRPRMIVSESLDGDTHLRATNSENRFTHHQTED
EQDHYIRASGNDVQFGSRQGDGEAHQRTSSPSDSQYSQDDHDINRSGLDH
SVANIHMGVGDQQPALVQTGTGECIHNEDSMHQVEVPREVLDNDDDDADD
DHISHPHTDPNGTNLYHANDDEDDQLTPHHPFSLVNHDVGPSEDGEARDD
SHTLGLSEPQQGIDLQVRLVEEPQDCYVPERPRSPSMDLEQRSHGQHLSP
FSARDEKMKSTQLGVIVESQRAGHSLGQGRDRGAPSGPQRAKSEKQITNN
LSRSGESLRFTDRDSPDNCTGHGGFYAGRDDENGYRDRRVIARIFDKDPD
VHQLDSSARERSVAGEINELPGNGNGMISNESEFMRKRDFKEENEEIGND
RLDGTDTRGMLAAGAYMNRDGMRRGSPLSQPAGLRLHNSNEEDSTLDVQN
RSSFDGKNVPVNPSSSDSSREVIPLVNAAHTFKVKRIKPITQRREKVLVS
EGQGGAERELPASLRRDHGVPIEHDKSVMRNRKADTDQEGCEENSLTTGG
RHRVEAGASLANLLNPTSLDCGPGSNAYNRRRENDAKDLGSHELSGLQEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf