Ggra5483.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5483.t1
Unique NameGgra5483.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length594
Homology
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A2V3J0S4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0S4_9FLOR)

HSP 1 Score: 397 bits (1021), Expect = 6.770e-131
Identity = 216/345 (62.61%), Postives = 252/345 (73.04%), Query Frame = 0
Query:  245 MDDENSPPLRPPARPQSPLLLPSERIPLAPPHIDHNASTPSAYESPTPPTSPSTDYPYGAVARVVPPSPDADGYRERRTLRVSDPLQTVHLITDSSQSECSQGPYLDQAQRESTQRRRQRIADTTILGIAIFVVTGVVFLVMTTGFTAMVTNQNSPRLQIFSAWPDGGVIPLEYGCHAPDGVPISIPLRWQDVPPSATNLVILFSHPGALHESKVDPVHWFVTDIPLGPDHDNHMPANASTNPALLPHGAVQRANVYSHGGYYWPPCSNITSVFTIHAYAVEAPAVIERVDDAREIMMRFDGVPFAKLRGTYSHSAPP------ASQSEQTDDAHSEPSSSNHGT 583
            M DE + PLRP   P+SPLL PSERIPLAP H DHNASTPSAYESP+PPTSPST+YPYGAVARVVP   D+   + RR   ++DP QTVHLITDSS SE S   Y+D  + E + R RQR+ DT ILG  I  +T +V ++M +G   MV N+NS +L+IFS WPDGGVIPL+YGCHA    PISIPLRW++VP SATNL++LFSHPGALH+S VDPVHWFVT+I L     + M  NAS N AL+P GAVQRAN +SH GYYWPPCSN TSVFT+HAYAVEAPAVIE   DAREI+MR DGVP AKL GTYS  +P       + Q    DD HS   +S + T
Sbjct:    1 MADEQTVPLRP--VPRSPLLSPSERIPLAPAHTDHNASTPSAYESPSPPTSPSTEYPYGAVARVVP---DSYVTQNRRLNGLADPQQTVHLITDSSASEYSADRYVDHTRLEIS-RLRQRLMDTYILGAVIVAITTIVSVIMASGLATMVANRNSAKLEIFSDWPDGGVIPLKYGCHAHGHHPISIPLRWENVPASATNLIVLFSHPGALHDSTVDPVHWFVTNIRLDEAAPSFMAPNASVNAALMPGGAVQRANAFSHQGYYWPPCSNTTSVFTVHAYAVEAPAVIEDTYDAREIIMRLDGVPGAKLHGTYSRHSPSNMDLSSSLQGHSHDDHHSNAGASQNDT 339          
BLAST of Ggra5483.t1 vs. uniprot
Match: R7Q6F2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6F2_CHOCR)

HSP 1 Score: 242 bits (618), Expect = 2.070e-70
Identity = 114/204 (55.88%), Postives = 154/204 (75.49%), Query Frame = 0
Query:  355 RESTQRR-RQRIADTTILGIAIFVVTGVVFLVMTTGFTAMVTNQNSPRLQIFSAWPDGGVIPLEYGCHAPDGVPISIPLRWQDVPPSATNLVILFSHPGALHESKVDPVHWFVTDIPLGPDHDNHMPANASTNPALLPHGAVQRANVYSHGGYYWPPC-SNITSVFTIHAYAVEAPAVIERVDDAREIMMRFDGVPFAKLRGTY 556
            RE ++R  R+ + D  ILG ++ V+T +VF+++ +G T ++ N+N P+L++FS WP+GG+IPL+YGCHAPDG P+SIPLRW++VP +ATNLV+LF++PGA+ + ++DPVHWF+TDIPL  D D  +PANAS NP L+P  + QRAN  S  G YWPPC +N TS F +H YA+EAP VI    DAREIM RF GVP A+L G Y
Sbjct:  145 REYSRRELREGMKDRYILGCSVLVMTAIVFVIIVSGMTTILANRNYPQLEVFSDWPNGGLIPLKYGCHAPDGHPVSIPLRWRNVPRAATNLVVLFANPGAISKRRMDPVHWFITDIPLEDDKDGSIPANASLNPELMPPNSKQRANAGSSKGVYWPPCVTNGTSFFIVHIYAIEAPPVISDFRDAREIMNRFVGVPVARLTGWY 348          
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A2V3J0R0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R0_9FLOR)

HSP 1 Score: 235 bits (599), Expect = 1.490e-69
Identity = 129/178 (72.47%), Postives = 145/178 (81.46%), Query Frame = 0
Query:   64 VSTARTKPSVH---NSLPA-DSLPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPSTAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGRK 237
            VS ++ KP      NSL A DSLPRYA + STLGLLR  DYIGT+SFAHSGA+LAAA GMD+LG  +VGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLC+ TAA+TF LY+   P   REESA+EF +DT+GV AFCVIGA+NGVRARVP  V  LCG ATATFGGVVRD+L GR+
Sbjct:   23 VSASQRKPEQAARPNSLAAHDSLPRYA-NVSTLGLLRAADYIGTISFAHSGAMLAAAAGMDLLGTALVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCLLTAATTFVLYSRNPPDQQREESALEFASDTVGVAAFCVIGAINGVRARVPALVTTLCGTATATFGGVVRDLLVGRE 199          
BLAST of Ggra5483.t1 vs. uniprot
Match: R7Q7M5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M5_CHOCR)

HSP 1 Score: 199 bits (506), Expect = 5.230e-56
Identity = 112/177 (63.28%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   61 ASTVSTARTKPSVHNSLPADSLPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPSTAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGRK 237
            +S   +A T P  H  LP DSLPR+ T S T G LR  DY+GT+SFAH+GALLAA  GMD LG  +VGTITAVGGGTIRDAVIL  RPFWTEE EYLYLC+  +  TFA++    P    + SA+ FV D+ GV AF VIGA NGVRA VP  V V+CGMATATFGG VRDVLC RK
Sbjct:   29 SSNERSASTSPISHE-LPVDSLPRFPTLS-TPGGLRALDYVGTLSFAHTGALLAATSGMDALGTCVVGTITAVGGGTIRDAVILNARPFWTEEPEYLYLCLLASGLTFAMW----PREKEDNSALHFVTDSAGVAAFAVIGAQNGVRAGVPAIVSVVCGMATATFGGAVRDVLCNRK 199          
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A830HNH6 (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HNH6_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 3.620e-41
Identity = 91/157 (57.96%), Postives = 112/157 (71.34%), Query Frame = 0
Query:   82 LPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVILAKRP-FWTEEVEYLYLCIATAASTFALYAACAPSTAREES-AVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGR 236
            LPR+   ++  GLLRF DY+GTV+FA SGAL A+A GMD LG  +VGTITAVGGGT+RD ++  + P FW  E EYLY+CIAT A+TF L+   + S     + AV    D +G+GAFCVIGA NGVRA VP+    +CGMATATFGGV+RD LC R
Sbjct:  167 LPRFPEPNAG-GLLRFLDYVGTVAFASSGALTASAAGMDALGCGIVGTITAVGGGTVRDFLLGVRGPCFWMAEAEYLYMCIATTAATFFLWPNISQSQMNPTAEAVIETGDFLGLGAFCVIGAHNGVRAGVPLVAAAICGMATATFGGVIRDTLCKR 322          
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A836CDZ5 (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.630e-41
Identity = 87/157 (55.41%), Postives = 105/157 (66.88%), Query Frame = 0
Query:   80 DSLPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPSTAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGR 236
            D L RY + SS  G+LR  D  GTV FA+SG + A   GMD+LG T+VGTITAVGGGT+RD ++     FW  E EYLY+C+A A  TF  Y+A A      +S +   AD +GVGAFCVIGA N VR R+  A+ V CGM TATFGGV+RDVLC R
Sbjct:   22 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQR 178          
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A7S0IDQ1 (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IDQ1_MICPS)

HSP 1 Score: 158 bits (399), Expect = 2.940e-39
Identity = 96/187 (51.34%), Postives = 121/187 (64.71%), Query Frame = 0
Query:   65 STARTKPSVHNSLPA--------DSLPRYATSSSTL--GLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVI-LAKRPFWTEEVEYLYLCIATAASTFA----LYAACAPSTAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGR 236
            S A +KP+++ + P         DS+PR+  S      GLLR  D+ GT  FA +G L AA  GMD+LG+T+VGTITAVGGGT+RD ++   +R FW EE+EYL++C+ T  +TF     L  AC      E   V++ AD IGVGAFCVIGAMNG+RA VP A  V CGM TATFGGV+RDVL  R
Sbjct:   95 SPASSKPTMNAAEPVPATPAPHPDSMPRFPWSDGATVPGLLRGADWFGTAVFAMTGTLAAATRGMDILGSTIVGTITAVGGGTVRDLLLGRGRRAFWMEEIEYLWICVGTGVATFLAWPHLERACGVKDTDEW--VDW-ADAIGVGAFCVIGAMNGIRAGVPCAAAVACGMFTATFGGVIRDVLMSR 278          
BLAST of Ggra5483.t1 vs. uniprot
Match: C1MVB5 (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MVB5_MICPC)

HSP 1 Score: 155 bits (392), Expect = 4.080e-38
Identity = 89/163 (54.60%), Postives = 107/163 (65.64%), Query Frame = 0
Query:   80 DSLPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVI-LAKRPFWTEEVEYLYLCIATAASTFALYAACAPSTAREESAVEF-----VADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGR 236
            D +PRY   S   G LRF DY GT SFA +G L AAA GMD+LG  +VGTITAVGGGT+RD ++   +R FW EE+EYL++C+ T   TF  +    P+  RE    E        D IGVGAFCVIGA NG+RA VP+  V+ CGM TATFGGV+RDVL  R
Sbjct:  144 DGMPRYPELSIP-GTLRFLDYFGTASFAMTGTLAAAARGMDLLGCVVVGTITAVGGGTVRDLLLGRGRRAFWMEEIEYLWICLGTGVLTFLSW----PTLRREFGVDESDWWVEAWDAIGVGAFCVIGAQNGIRAGVPLPAVIACGMFTATFGGVIRDVLMSR 301          
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A6A4Y628 (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y628_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.600e-36
Identity = 85/172 (49.42%), Postives = 104/172 (60.47%), Query Frame = 0
Query:   78 PADSLPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPSTA-------------REESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGR 236
            P + LPR+ + +S  G LR  D+ GT  FA SG+L AA  G D+LG T+VGTITAVGGGT+RDA++L K PFW +E EYL L  A AA  F  +    P  A               E  +    D +GVGAF VIGAMNG+RA+ P+ V  LCGM TATFGG+ RD L  R
Sbjct:   45 PREGLPRWPSLTSATGCLRSLDWFGTAVFAVSGSLTAATTGCDLLGCTLVGTITAVGGGTLRDALVLQKPPFWVDEWEYLVLSAAAAAGAFYFWGDVDPGRAFFGLDGLTLKAADGGEGTLMDWGDAVGVGAFAVIGAMNGIRAQCPLLVSALCGMMTATFGGLTRDTLLHR 216          
BLAST of Ggra5483.t1 vs. uniprot
Match: A0A7R9SZ31 (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9SZ31_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 3.050e-36
Identity = 88/174 (50.57%), Postives = 112/174 (64.37%), Query Frame = 0
Query:   71 PSVHNSLPADSLPRYATSSSTLGLLRFGDYIGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVI-LAKRPFWTEEVEYLYLCIATAASTFALYAACAPSTAREESA-------VEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGR 236
            P VH     D +PRY  + +  G LR  DY GT SFA +G+LLAAA GMD  G T VGTITAVGGGT+RD ++   +R FW EE EYL++   TA +TF     C   +A+++         +E  +D +GVGAFCVIGA NG+RA VP+   VLCG+ TATFGG+VRD+L  R
Sbjct:   77 PKVH----PDGMPRYP-NFTVPGALRLADYFGTSSFAMTGSLLAAASGMDAFGCTAVGTITAVGGGTVRDILLGQGRRAFWMEEQEYLWIAAGTALATF-----CGWESAKKQFGFTDDDYWIE-ASDALGVGAFCVIGAQNGIRAGVPMIAQVLCGIMTATFGGIVRDILVQR 239          
The following BLAST results are available for this feature:
BLAST of Ggra5483.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0S46.770e-13162.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q6F22.070e-7055.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J0R01.490e-6972.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7M55.230e-5663.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A830HNH63.620e-4157.96Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A836CDZ55.630e-4155.41UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S0IDQ12.940e-3951.34Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
C1MVB54.080e-3854.60Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A6A4Y6282.600e-3649.42Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A7R9SZ313.050e-3650.57Hypothetical protein n=1 Tax=Ostreococcus sp. 'luc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005115Glycine transporterPFAMPF03458Gly_transportercoord: 99..171
e-value: 1.5E-17
score: 63.2
coord: 188..236
e-value: 5.8E-15
score: 54.9
IPR036610PEBP-like superfamilyGENE3D3.90.280.10coord: 405..556
e-value: 9.2E-15
score: 56.8
IPR036610PEBP-like superfamilySUPERFAMILY49777PEBP-likecoord: 406..525
IPR008914Phosphatidylethanolamine-binding proteinPFAMPF01161PBPcoord: 424..545
e-value: 3.6E-6
score: 27.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 558..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 555..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..360
NoneNo IPR availablePANTHERPTHR30506:SF3UPF0126 INNER MEMBRANE PROTEIN YADScoord: 94..237
NoneNo IPR availablePANTHERPTHR30506INNER MEMBRANE PROTEINcoord: 94..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..369
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 370..394
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 395..593
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..206
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 370..392
NoneNo IPR availableTMHMMTMhelixcoord: 210..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:426591..428751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5483.t1Ggra5483.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 426591..428751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5483.t1 ID=Ggra5483.t1|Name=Ggra5483.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=594bp
MSVRAMSALRHAARFAARRAQLQRSPPARVFCDASSPSPSPSPSPSSSSP
SSPQKPRARAASTVSTARTKPSVHNSLPADSLPRYATSSSTLGLLRFGDY
IGTVSFAHSGALLAAAGGMDVLGATMVGTITAVGGGTIRDAVILAKRPFW
TEEVEYLYLCIATAASTFALYAACAPSTAREESAVEFVADTIGVGAFCVI
GAMNGVRARVPIAVVVLCGMATATFGGVVRDVLCGRKSSSSAVAMDDENS
PPLRPPARPQSPLLLPSERIPLAPPHIDHNASTPSAYESPTPPTSPSTDY
PYGAVARVVPPSPDADGYRERRTLRVSDPLQTVHLITDSSQSECSQGPYL
DQAQRESTQRRRQRIADTTILGIAIFVVTGVVFLVMTTGFTAMVTNQNSP
RLQIFSAWPDGGVIPLEYGCHAPDGVPISIPLRWQDVPPSATNLVILFSH
PGALHESKVDPVHWFVTDIPLGPDHDNHMPANASTNPALLPHGAVQRANV
YSHGGYYWPPCSNITSVFTIHAYAVEAPAVIERVDDAREIMMRFDGVPFA
KLRGTYSHSAPPASQSEQTDDAHSEPSSSNHGTAPKHVQHSLT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005115Gly_transporter
IPR036610PEBP-like_sf
IPR008914PEBP