Ggra5471.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5471.t1
Unique NameGgra5471.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1019
Homology
BLAST of Ggra5471.t1 vs. uniprot
Match: A0A2V3J150 (Putative ATP-dependent RNA helicase DDX20 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J150_9FLOR)

HSP 1 Score: 530 bits (1364), Expect = 1.770e-167
Identity = 300/625 (48.00%), Postives = 391/625 (62.56%), Query Frame = 0
Query:   69 DYQERSCFDCPNFPNPALITFQRLQSALEQQSTAETENMMQRNAVMAASVSPGRFADGLENESIPQQRCESNISDVAKFGSPRSLSQRNHSSVRSVSIDHSQNTEAI--------ATHSAKQQ----VPLSSSGELPE---PTP------------------------------------NLVKRRRIMPT---RYTYSHDEIWRLRHYNRSLDARTLGASAVIVLTEDPVPPTPIRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDERNQVLMLETSLGSKI 639
            D +    F C NFPNPAL+ +Q+L +            M   +A        G      + E +P   C++  +   +  S +S + +N + + S S       + +        A H  ++Q    +P +SS   P    PTP                                      V+++ I  T   RYTYS + +  LRH +R+         A I+ T +P   TP     NL FADM+L   I+NAL +LSF +PSPIQQ A+PRGR G D+IAHA+SGTGKT+AF +IVLE+LL+L       TSVLILVPTREL DQVA VFR L++FM   PRV  +KGG  E+ID Q+LSL+  H+VIGTPGRVI LI+K + VVDH+NL V+DEADRL +S + HSVPEICA+LPSRRQT+AFSAT+EPWLR++L+ VMR PA+FSFP S H +D+ DMLRRA+LD V QYK+ V G ++ KL+ V+ LL  + F  CI F+NDK+YVAKV+MH K  G++T I+NA+L+Q QR+R I  I+ G++QI+VA+DLLARG+DFE CDL++QLDVP NPATYLHRVGRAGRYG+ GSSFL YN R+D   QV  LETSLGS I
Sbjct:   42 DQRHLPAFSCDNFPNPALLVYQQLLT------------MPVSDAAPVRRQLYGSLQHWFKEEPLPVAHCQTGPTTALR-PSAKSNAVKNQTPLNSTSTTQPNPVDDVPPDANHHDAFHPDQRQKHRRIPRNSSRPTPPAAPPTPAKEAESPIHRTVTETHRSLQTCTPIGMQSHLQPKSRKQVEQQSIHSTPVKRYTYSINRLNNLRHRDRASFPHLTSQHAAILQTIEPPSSTPAETFPNLTFADMHLPPSILNALSALSFHKPSPIQQCAVPRGRLGTDIIAHARSGTGKTLAFTIIVLETLLALKFTAKAITSVLILVPTRELVDQVAAVFRGLTRFMETKPRVQTLKGGRAESIDAQELSLSPAHIVIGTPGRVIALIKKSILVVDHVNLFVMDEADRLVDSTYLHSVPEICALLPSRRQTLAFSATYEPWLRNVLMDVMRDPAYFSFPNSEHPSDETDMLRRAVLDHVHQYKVAVVGGINDKLKGVSDLLKNTLFNLCITFINDKKYVAKVVMHFKTFGYRTQILNASLEQYQRERAIADIQSGRVQIVVATDLLARGVDFEACDLVIQLDVPQNPATYLHRVGRAGRYGKGGSSFLFYNLRSDCI-QVRALETSLGSPI 652          
BLAST of Ggra5471.t1 vs. uniprot
Match: R7QA43 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA43_CHOCR)

HSP 1 Score: 270 bits (689), Expect = 1.490e-74
Identity = 161/406 (39.66%), Postives = 232/406 (57.14%), Query Frame = 0
Query:  253 DQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFP-------------TSTHSNDD--IDMLRRAILDKVRQYKIPVSGSL---DTKLERVTA----LLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDERNQVLMLETSLG 636
            D  L F+D+ L  PI+ AL       PSP+Q  A+P  R G D+I  AKSGTGKT+ F ++  E+  S +  +G   + L++ PTREL  Q+A V +SL       P V +  GG PE  D  ++    P + + TPGR + L+++G   V  + LLVLDEADRL + +   +VP IC MLP R+QT+AFSAT+   L+ +L KVMR+                     ST S D    D  ++A+L  VRQ KI V   +   +TKLE  TA    L+ K+ F FCI F N K+    V+  L   GF +  ++A + Q +R   +     G LQ++VA+DLLARG+D + CDL++ LD+P++ ATYLHRVGRAGR+G+ G S +++++  DE  ++  +E  LG
Sbjct:   95 DAGLTFSDLALPPPILCALARQEITHPSPVQLRALPAARLGADVIVQAKSGTGKTLVFGIVAAEAAASSSSLQGP--AALLIAPTRELAAQIARVTQSLCDGFENSPHVSLFIGGCPEREDAARIVQLPPAIAVATPGRALALVERGNLRVAAMKLLVLDEADRLLDGSLGDTVPRICEMLPMRKQTLAFSATYPAKLQVLLRKVMRNATHIQVQRRPQLSEEVGEKDASTASKDTNAADPNQKAVLLGVRQRKIQVERGVNTSETKLEAKTAALVALIQKNPFSFCIVFTNSKKRNKSVVDRLSRAGFASADIHAGIRQLERTAIMKSAADGNLQVLVATDLLARGVDIDICDLVVHLDIPHDSATYLHRVGRAGRFGKLGLSVVIHDS-GDEAAELHSMEKGLG 497          
BLAST of Ggra5471.t1 vs. uniprot
Match: A0A1Y1XXT5 (DEAD-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXT5_9FUNG)

HSP 1 Score: 225 bits (573), Expect = 1.730e-61
Identity = 135/365 (36.99%), Postives = 207/365 (56.71%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIM-NALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDD-IDMLRRAILDKVRQYKIPVSGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNG 612
            + I++N+ F D  +S P++   L    +R+PSPIQ  A+P GR G D++A AKSGTGKTI F VI LE++ +L++    F  VL+L PTRE+  Q+  V  +++ F+  + +V V  GG P  I E    L + H+ +GTPGRV  LIQ G F    + L VLDEAD+L E  F   +  I   LP  +Q++AFSAT++  L + + + +  P +    + T S +  +      +        I    +   K  R+  LLSK  F  CI F+N +    ++  +L  +G+    ++  L+QR+R  T+   +  +L+++V SDL+ARG+D E  DL++ LD+P +P TY HRVGR GR+G  G
Sbjct:   12 VLINENVTF-DTLISNPLLLKGLNQSGYRKPSPIQLKALPLGRLGLDLVAQAKSGTGKTIVFSVISLEAV-NLHV---NFPQVLVLAPTREIAVQIKEVMTAVASFIEGL-QVQVFIGGLP--ISEDLSKLRNCHIAVGTPGRVQALIQAGSFPTHALKLFVLDEADKLMEDVFFVQIEVIYKSLPQTKQSMAFSATYDNGLLEKINRFVHMPQYVMLCSETPSLEGWVQQYYEVVSSDGDSNAIQKFAAYKGKFRRLEELLSKVPFYQCIIFLNHRGRAVELSENLTRKGWPALYISGGLNQRERLATLSKARNFQLRVLVCSDLIARGVDIERVDLVVNLDMPRDPETYFHRVGRTGRFGTRG 368          
BLAST of Ggra5471.t1 vs. uniprot
Match: A0A6A4WRJ1 (RNA helicase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WRJ1_AMPAM)

HSP 1 Score: 227 bits (578), Expect = 8.690e-61
Identity = 139/382 (36.39%), Postives = 209/382 (54.71%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPV------SGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDER 625
            + + +++ FA + LS+P++  LR   F RPSPIQ  AIP GR   D+I  AKSGTGKT    V+ LE+L++      G    L+L PTRE+  QVA V  ++   + P   V  + GG P A D   L     +V +GTPGR+  L+       D + L V+DEAD+L E AF   +  I + LP+ +Q +A SAT+   L  +L + MRSP F     S+ +           L  +RQY + V      +  L  KLE +  +LS  SF  C+ F N +     +   L + G+ +  ++++L Q +R   +  +   + +++V +DL ARG+D E  DL++QLDVP++ ATYLHRVGRAGRYG  G++  L +   +E+
Sbjct:   17 VAVSEDVTFAGLLLSEPVLLGLRRAGFERPSPIQLRAIPLGRCAVDLIVQAKSGTGKTCVLAVLALEALVAAP--PSGRCRALVLAPTREVAVQVAQVITAIGVEV-PGLAVQTLIGGLPLAQDVANLRRC--NVAVGTPGRIRQLVDCEALNTDSVRLFVMDEADKLMEDAFVDDINFIYSTLPASKQMIALSATYPDTLASLLARYMRSPTFVRLGKSSPA-----------LLGIRQYVMTVPCEPLVTKQLKVKLEALVNILSTVSFTQCLVFSNHQTRAETLCSQLSSRGWPSAHLSSSLSQERRLEALSQLTSLRCRVLVTTDLGARGVDSEHADLVVQLDVPWDGATYLHRVGRAGRYGSLGAAVALVSLGEEEQ 382          
BLAST of Ggra5471.t1 vs. uniprot
Match: A0A6J1Q3R1 (RNA helicase n=1 Tax=Temnothorax curvispinosus TaxID=300111 RepID=A0A6J1Q3R1_9HYME)

HSP 1 Score: 221 bits (564), Expect = 1.580e-59
Identity = 140/387 (36.18%), Postives = 218/387 (56.33%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDERNQVLMLETSLG 636
            I+I+ ++ F  M L Q I++ L S  F++PSPIQ  AIP GR G D+I  AKSGTGKT+ F +I LE+L  L+I+      VLI+ PTRE+  Q+ +V +++   +  + RV    GG P  ++E +  L+  HV +G PGR+  LI+KG   V  + L VLDEAD+L E +F   +  I + LPS +Q +A SAT+   L   L   M SP      TS + +  I +  R  +  V  Y   +   + TK++ +  + +K SFK  + F N +     V   + + GF +  +    D  +R   I +++  + +I++ +DL ARG+D E+ ++++ LD+P +PATYLHR+GRAGRYG  G S  + +   +E +    L  S+G
Sbjct:   18 IKIEGDVTFFQMRLPQDILDGLMSAGFQKPSPIQLKAIPLGRCGFDLIVRAKSGTGKTLVFGIIALETL-DLSIQSP---QVLIIAPTREIAIQITHVIQAVGAKIEEL-RVEYFVGGMP--LEEDKKKLSKCHVAVGAPGRIKHLIEKGFLHVSKVRLFVLDEADKLMEISFQKDINYIFSKLPSSKQIIASSATYPGDLETFLQTYMSSPVL----TSPNIDGPILIGIRQFVAVVPAYPNAMK-QVQTKVDELVKIFTKISFKQSLVFSNYQSRAQSVSNKINSLGFSSSYIAGNQDMTKRLEAIENLRNLECRIMLTTDLTARGIDIENVNMVVNLDIPNDPATYLHRIGRAGRYGSYGISITIIS--ENELSSFKKLLASIG 390          
BLAST of Ggra5471.t1 vs. uniprot
Match: A0A1X2GMP3 (DEAD-domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GMP3_9FUNG)

HSP 1 Score: 220 bits (561), Expect = 2.590e-59
Identity = 140/389 (35.99%), Postives = 218/389 (56.04%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGSLD---------------TKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRND 623
            ++ID+++ F+ +  +Q I+  L    + RPSPIQ  AIP GR G D+IA AKSGTGKT+ F VI LE++ +LN+K      VL++ PTRE+  Q+ +V ++L + M P      + GG P   D+Q+L  +   V++GTPGR++ L+       + INL V+DEAD+L    F   +  I + LP ++Q+VAFSATF     D LL  +    F   P + H   D+  L     ++V+QY+  V    D                K E +  LLSK  F  C+ F N      ++   L   G++TG +++ L Q +R + +  ++Q  L+++V SDL+ARG+D +  +L++ +D P +  TYLHR+GR+GRYG +G +  L  T +D
Sbjct:   11 VQIDKDIDFSPLIHNQYILQGLEKSGYARPSPIQLKAIPLGRLGVDLIAQAKSGTGKTVVFGVIALEAV-NLNVKGP---QVLMVAPTREIAVQICDVVQNLGQCM-PGFHCSALIGGLPMQADQQRLQHS--QVLVGTPGRLMALLSSQKLPTNTINLFVMDEADKLMSDTFRPQIDYIYSRLPLKKQSVAFSATFT----DALLASLNK--FVVNPHTIHLTQDVPTL-----EEVQQYQTAVQIDTDDAEEAPYLRAMKVYKAKYEAIGKLLSKVEFYQCMVFTNSFSRSVELAAWLTKMGWKTGYISSGLTQAKRLKVMEDMRQFNLRVLVCSDLIARGIDIDRVNLVINVDYPRDVETYLHRIGRSGRYGTSGIAVNLVATEDD 381          
BLAST of Ggra5471.t1 vs. uniprot
Match: A0A369SKE7 (RNA helicase n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SKE7_9METZ)

HSP 1 Score: 225 bits (573), Expect = 4.060e-59
Identity = 135/377 (35.81%), Postives = 209/377 (55.44%), Query Frame = 0
Query:  258 FADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGS------LDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDERNQV 628
            FA + LSQ ++  LR   + +PSPIQ  +IP  R G D+IA AKSGTGKT  F+V+ LE ++ L I       VLIL PTRE+  Q+  V  ++ KF+  +   + + GG P  +D Q+    + H+ +GTPGRV+ LI+ G      I L VLDEAD+L E  F+  + +I   LP+ +Q +A SAT+   L  +L+K M++P      +           +R +L  V+QY   +S           K+++++ +L+K  F  C+ F N +    +V   L   G+ +  +     Q+ R   I  +     +++++SDL ARG+D E+ DL++ LD+P +P TYLHRVGRAGR+G +G +  L  T  DER ++
Sbjct:   29 FASLLLSQNVLRGLRDAGYIKPSPIQLKSIPVARCGLDLIAQAKSGTGKTCVFVVVALE-IVDLTICSP---QVLILAPTREIAIQINQVVNTIGKFVGGLSSQVFI-GGLPVKLDNQKTK--NCHLAVGTPGRVLQLIESGALATKSIRLFVLDEADKLLEKNFTEQLNQIFKHLPTSKQILALSATYPECLTKLLIKCMKNPQVIRLDS-----------KRPVLHGVKQYFCKISSYALSHKIFSLKIDKLSYILTKIPFHQCLVFSNYQTVATEVNKALNACGWPSIYIYGAQSQKDRMDAIKKMNDFSCRVLISSDLTARGVDIENIDLVVNLDLPNDPETYLHRVGRAGRFGSSGIAITL--TTADERQKL 385          
BLAST of Ggra5471.t1 vs. uniprot
Match: uncharacterized protein LOC106807357 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E39E (uncharacterized protein LOC106807357 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E39E)

HSP 1 Score: 231 bits (590), Expect = 4.720e-59
Identity = 140/380 (36.84%), Postives = 210/380 (55.26%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKI----PV-SGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDE 624
            I I +++ FA + LS  + N LR+  F+RPSPIQ  AIP GR G D+I  AKSGTGKT  F VI LE+L++    +   T VL+L PTRE+  Q+  VF  +   + P  +     GGT   + +  L     HV +GTPGR++ LI++ +   D I + VLDEAD+L E +F   +  I + LP  +Q +A SAT+  +L + L   MR+P F            +D    A+L   + Y I    P+   + D KL+ +  LLS  +F  C+ F N +     +   L   G+ T  +  + DQ+QR   +  +K  + +I+V++DL +RG+D E  +L++ LDVPY+  TYLHRVGRAGR+G  G++  +     +E
Sbjct:   25 IHITEHVDFAGLLLSGSVQNGLRTAGFKRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTVIALENLVA----ESAATQVLVLAPTREIAIQITEVFHMIGSGI-PNLKCAHFIGGT--TLQQDVLKAKRCHVAVGTPGRIMQLIEQQILKTDSIRMFVLDEADKLLEESFQEQINWIYSTLPENKQILALSATYPEYLAEHLTHYMRNPMFVR----------LDSSNPALLGVQQYYHIVPFHPIPQKAFDNKLKALFELLSTVTFHQCLIFSNYQTRAQTLSEQLNARGWPTAYICGSQDQKQRTHILTQLKLLQCRILVSTDLTSRGIDAEYVNLVVNLDVPYDTDTYLHRVGRAGRFGSIGAAVSIATIGKEE 387          
BLAST of Ggra5471.t1 vs. uniprot
Match: probable ATP-dependent RNA helicase DDX20 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589A3B (probable ATP-dependent RNA helicase DDX20 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589A3B)

HSP 1 Score: 230 bits (587), Expect = 6.160e-59
Identity = 133/376 (35.37%), Postives = 207/376 (55.05%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFT-SVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRYGRNGSSFLLYNTRNDE 624
            + I  N+ FA + LS P++  L+S  F RPSPIQ  AIP GR G D+I  AKSGTGKT  F VI LE L     +   F   VL+L PTRE+  Q+ +V R + + ++ +     + GG P   D Q+L     H+ +GTPGR+  LI+ G+   D I + +LDEAD+L E  F   +  I + LP  +Q +A SAT+  +L   L   MR+P F     S  +   I+   R++      +K       + K + VT +LS  +F+ C+ F N +     +   L + G+ T  +   LDQ+ R+  +  +K  K ++++++DL +RG+D +  DL++ LD+P +  TYLHR+GRAGR+G  G++  + +   +E
Sbjct:   18 VLISDNIDFAGLLLSHPVLQGLKSSGFERPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFSVIALEGL-----QTASFALQVLVLAPTREIAIQIWDVIRGIGRNVSRLSCQTFI-GGMPLQEDRQKLKKC--HIAVGTPGRIKQLIENGMMTTDSIRMFILDEADKLLEEGFQEQINWIYSSLPENKQMLALSATYPEYLAQHLTAYMRNPTFLRLNISDPALLGINQYFRSVPFHPLPHK-----QFENKTKVVTEILSSVNFQQCLIFSNLQTRAQNMADTLTSLGWPTACIAGRLDQKDRNEAMSKLKTYKCRVLISTDLTSRGIDADKVDLVMNLDIPKDHETYLHRIGRAGRFGTFGAAVTIISQGQEE 380          
BLAST of Ggra5471.t1 vs. uniprot
Match: ATP-dependent RNA helicase DbpA-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188559CF (ATP-dependent RNA helicase DbpA-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188559CF)

HSP 1 Score: 224 bits (571), Expect = 3.280e-58
Identity = 138/359 (38.44%), Postives = 200/359 (55.71%), Query Frame = 0
Query:  250 IRIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHAKSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRSLSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGVFVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWLRDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGSLDTKLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQRQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLHRVGRAGRY 608
            +R+ +++ FA + LS+P++  L+   F RPSPIQ  AIP GR G D+I  AKSGTGKT    V+ LE L +      G    L+L PTRE+  QVA V  ++   + P   V  + GG P A D   L      V +GTPGRV  L+       D + L V+DEAD+L E AF   +  I + LP+ +Q VA SAT+   L D+L + MR+P F     S+ +   +  +R+ +L     Y+  V   L  KL+ +  LLS  SF  C+ F N +     +   L   G+ +  +++ L Q +R   +  +   + +++VA+DL ARG+D E  DL++QLDVP++ ATYLHRVGRAGRY
Sbjct:   27 VRVSEDVTFAGLLLSEPVLLGLQQAGFERPSPIQLRAIPLGRCGVDLIVQAKSGTGKTCVLAVLALELLAAAA--PSGRCQALVLAPTREVAVQVAQVVAAIGSHV-PGLAVHTLIGGLPLAQDVANLRRC--QVAVGTPGRVRQLVDSEALNTDAVRLFVMDEADKLMEDAFVDDINFIYSTLPASKQMVALSATYPETLADLLARYMRTPTFVRLGKSSSA---LLGIRQYVLTV--PYQPLVQKQLKLKLDALVHLLSTVSFTQCLVFSNHQTRAETLSTQLTARGWPSTHLSSALSQERRLEALARLTSLRCRVLVATDLGARGVDSEHADLVVQLDVPWDGATYLHRVGRAGRY 375          
The following BLAST results are available for this feature:
BLAST of Ggra5471.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1501.770e-16748.00Putative ATP-dependent RNA helicase DDX20 n=1 Tax=... [more]
R7QA431.490e-7439.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1Y1XXT51.730e-6136.99DEAD-domain-containing protein n=1 Tax=Basidiobolu... [more]
A0A6A4WRJ18.690e-6136.39RNA helicase n=1 Tax=Amphibalanus amphitrite TaxID... [more]
A0A6J1Q3R11.580e-5936.18RNA helicase n=1 Tax=Temnothorax curvispinosus Tax... [more]
A0A1X2GMP32.590e-5935.99DEAD-domain-containing protein n=1 Tax=Hesseltinel... [more]
A0A369SKE74.060e-5935.81RNA helicase n=1 Tax=Trichoplax sp. H2 TaxID=28788... [more]
uncharacterized protein LOC106807357 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E39E4.720e-5936.84uncharacterized protein LOC106807357 n=1 Tax=Priap... [more]
probable ATP-dependent RNA helicase DDX20 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589A3B6.160e-5935.37probable ATP-dependent RNA helicase DDX20 n=1 Tax=... [more]
ATP-dependent RNA helicase DbpA-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188559CF3.280e-5838.44ATP-dependent RNA helicase DbpA-like n=1 Tax=Polli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 528..609
e-value: 7.0E-23
score: 92.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 501..609
e-value: 3.4E-21
score: 75.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 501..651
score: 16.713261
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 275..479
e-value: 9.8E-42
score: 154.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 287..464
score: 25.297049
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 256..466
e-value: 7.1E-55
score: 187.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 481..653
e-value: 1.3E-34
score: 120.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 331..624
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 281..447
e-value: 5.0E-34
score: 117.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 885..906
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..811
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 827..875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..929
NoneNo IPR availablePANTHERPTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDcoord: 258..663
NoneNo IPR availablePANTHERPTHR47959:SF4ATP-DEPENDENT RNA HELICASE DBPAcoord: 258..663
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 487..618
e-value: 6.62367E-32
score: 119.149
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 256..284
score: 10.041273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:394168..397224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5471.t1Ggra5471.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 394168..397224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5471.t1 ID=Ggra5471.t1|Name=Ggra5471.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1019bp
MSQHTAQDEPVEDTIKPDFTPLPVTTSHTIAHAAAMPRARLEDNSQQHVV
NEQQIRRIREIEEQVTADDYQERSCFDCPNFPNPALITFQRLQSALEQQS
TAETENMMQRNAVMAASVSPGRFADGLENESIPQQRCESNISDVAKFGSP
RSLSQRNHSSVRSVSIDHSQNTEAIATHSAKQQVPLSSSGELPEPTPNLV
KRRRIMPTRYTYSHDEIWRLRHYNRSLDARTLGASAVIVLTEDPVPPTPI
RIDQNLLFADMYLSQPIMNALRSLSFRRPSPIQQAAIPRGRFGCDMIAHA
KSGTGKTIAFIVIVLESLLSLNIKKGGFTSVLILVPTRELTDQVANVFRS
LSKFMNPMPRVLVVKGGTPEAIDEQQLSLTSPHVVIGTPGRVIMLIQKGV
FVVDHINLLVLDEADRLAESAFSHSVPEICAMLPSRRQTVAFSATFEPWL
RDMLLKVMRSPAFFSFPTSTHSNDDIDMLRRAILDKVRQYKIPVSGSLDT
KLERVTALLSKSSFKFCIAFMNDKRYVAKVLMHLKNEGFQTGIMNATLDQ
RQRDRTILHIKQGKLQIIVASDLLARGLDFEDCDLILQLDVPYNPATYLH
RVGRAGRYGRNGSSFLLYNTRNDERNQVLMLETSLGSKIAVVDNLNARNL
TTIHRLNESQNPQLSTSVPAASRVCNSRSSQVSGESHMKDMDNIRHSRGI
ARPDADIDEAQGSLQAATSNSTTFVRTETPLMAKDMSSFDSHTTPVNNTR
DLRVRVRDLRTTIERSRDHLRGSVVEKKCSPKKMDNLVRRKSGAPGYAED
DEEKRGSQDSDPRSRPSSANRTGPCNAPRLRRRDPRRGRASDSEHLDMAK
MVIEDKGREETLRHADIKGKEHPESSCAPKGVSSPRANEERKHYRLDMRN
ETSHKLVSSSDKALSRDSSETPIDDRIESGADTVRELVPVSKENTEDRIQ
YLRSERHSDMHKTAGQDKEVAVNAAEHEPYDMWDAYARDAYAAGFREAYG
EAFRMRRDLQESLQDTHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif