Ggra547.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra547.t1
Unique NameGgra547.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length443
Homology
BLAST of Ggra547.t1 vs. uniprot
Match: A0A2V3IBT3 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT3_9FLOR)

HSP 1 Score: 377 bits (968), Expect = 1.170e-122
Identity = 204/442 (46.15%), Postives = 283/442 (64.03%), Query Frame = 0
Query:    2 RWYAHLDALQSRNPRIFSGSVLRRICEKDAGALRLKGIGVSLSNCLGIRRIYDAYYKPRLRKQKSRSAEFEHLKITVSQFLRMAVCFSVCAKEVVWEEHTLFTCVCNQQLVDRFIDVFFERSSRCTLRTKATCLKRVCDVGVVFGKDEVVRNQLTLASVLLQNIANGARRAHRTSCQRRKLVPSRVNIPLNPSSMNFLKRRARTVLDDTMRPYLANKRKSSCRIMKPYAYSKLKVWSINFAGLVMLMSGGQRPQVFSQLQLPSRQECLRL-FAERQKSYIELRTVDEKRPRHLDLPLLVLPSAVLPYLKFHVKVIRPAILELARSSQKRSYNPLILHWKTGKGLQPSQVTRALQKFFGSHSTRLENTTTMDLRRSYASMMLRAYLQNQIFPELPEAEFLQKIAQQMNTSVEQLRRTYMSPPGPSNCPETAMLVKFWSMFLNT 442
            RWY  L  L+  +P++F    L  + +   G    KGIG ++ NCLG+RR+Y+ YYKPRL+     +A F HL  TVSQFLR A+C S C+++ VW+EH LF  + +Q++V+RFI++   RSS  T++ + T +KRVCDVGV+   D  +  +L L  ++LQ++ N +R A+R  CQ +K + +R      P  ++ +KRRA   L+ TMR +   K++S     +    S L++W++NF GL+ML+SGGQRPQVFS LQLP+ +E  +L F   Q SYIELRT  EKRPR++DLP ++LP  V+PYL FHVK +RP I E A  S +  + PL +  KT  G +PSQVTR LQ F  SH       T+MDLRR YA+ MLR Y Q  IF  L E  FL+K+AQQMNTSVEQL+RTY++        ETA +VK+W   L++
Sbjct:  137 RWYEQLRHLEKCHPKLFE---LLEVRDAGPGTFYFKGIGATVKNCLGLRRVYETYYKPRLQNNGKGAAAFTHLSTTVSQFLRWAICTSTCSRKDVWKEHVLFRALADQKVVNRFIEMLMLRSSPGTVKNRITSMKRVCDVGVIISGDTAIGMRLKLVLIVLQHMENASRCAYRKRCQAKKDLINRSV----PRHLDLIKRRALGALNFTMRSFWHRKQRSGTDAARKSMRSYLQIWNMNFMGLIMLVSGGQRPQVFSGLQLPNEEEFQQLTFQAEQSSYIELRTGTEKRPRYIDLPFMILPVTVMPYLTFHVKYMRPEIQEAAGRSDEGLFEPLFIDSKTALGFKPSQVTRRLQLFLSSHGIERGCVTSMDLRRDYATRMLRNYRQKCIFSNLTENAFLEKLAQQMNTSVEQLKRTYVAHSSKI-ISETAEVVKYWGAVLDS 570          
BLAST of Ggra547.t1 vs. uniprot
Match: A0A2V3ICD7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD7_9FLOR)

HSP 1 Score: 67.8 bits (164), Expect = 9.620e-10
Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    2 RWYAHLDALQSRNPRIFSGSVLRRICEKDAGALRLKGIGVSLSNCLGIRRIYDAYYKPRLRKQKSRSAEFEHLKIT 77
            RWY  L  L+  +P++F    L  + +   G    KGIG ++ NCLG+RR+Y+ YYKPRL+KQ+ +  E + L+I+
Sbjct:   94 RWYEQLRHLEKCHPKLFE---LLEVRDAGPGTFYFKGIGATVKNCLGLRRVYETYYKPRLQKQRKK--ERQRLRIS 164          
The following BLAST results are available for this feature:
BLAST of Ggra547.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IBT31.170e-12246.15Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3ICD79.620e-1040.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 396..416
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 117..421
e-value: 5.3E-6
score: 28.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000153_piloncontigtig00000153_pilon:29547..30875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra547.t1Ggra547.t1Gracilaria gracilis GNS1m malemRNAtig00000153_pilon 29547..30875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra547.t1 ID=Ggra547.t1|Name=Ggra547.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=443bp
MRWYAHLDALQSRNPRIFSGSVLRRICEKDAGALRLKGIGVSLSNCLGIR
RIYDAYYKPRLRKQKSRSAEFEHLKITVSQFLRMAVCFSVCAKEVVWEEH
TLFTCVCNQQLVDRFIDVFFERSSRCTLRTKATCLKRVCDVGVVFGKDEV
VRNQLTLASVLLQNIANGARRAHRTSCQRRKLVPSRVNIPLNPSSMNFLK
RRARTVLDDTMRPYLANKRKSSCRIMKPYAYSKLKVWSINFAGLVMLMSG
GQRPQVFSQLQLPSRQECLRLFAERQKSYIELRTVDEKRPRHLDLPLLVL
PSAVLPYLKFHVKVIRPAILELARSSQKRSYNPLILHWKTGKGLQPSQVT
RALQKFFGSHSTRLENTTTMDLRRSYASMMLRAYLQNQIFPELPEAEFLQ
KIAQQMNTSVEQLRRTYMSPPGPSNCPETAMLVKFWSMFLNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf