Ggra5437.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5437.t1
Unique NameGgra5437.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length532
Homology
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BLAST of Ggra5437.t1 vs. uniprot
Match: A0A2V3IV39 (Ankyrin repeat domain-containing protein 50 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV39_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 5.670e-71
Identity = 151/352 (42.90%), Postives = 229/352 (65.06%), Query Frame = 0 
Query:  165 DPLAENNVGKTPLSLLPHGSQLAQQMRSKLPAPPVSE-LQQLWLDCKTSPLRASQLQAALRPENITSFSSVIIAHHLLLLAVRQRVLTCSQIQNLGDSRDYILQNVYLPVTKLSRNDGQKLWASTLLSRAEKEGFIRDGSGTLVKVVADLRSEIGHTSSETQQELISIAREVSSQQQRLVLSEQCTKPAVHTFQNLCRGQQQVLSDMQNMAASLQQLHAVLREQQPNHAFAAVVGFCLSMIPVVGGVLAGASLADQEVAFGLSVDLFYSDAEEAVKEILSVDISDIRTVAILMSDGFVNKLDPVARKRVEAVVQQTEFRSLTNVQQSLETLVEELD----DSSKTKEAEIRV 511
            DP A+N+ G+  +SL+   S+LA ++R   P    S  L+QLW+   +S    ++L AALR + ITSFSS I+AH+LLLLAVRQR++   +++ LG SRDYIL  VYLPVTK+     QK   + +LS AEK GFIRD   T VKVVA+LRSEI  ++ + Q  L+++AR+++S  QR+   E+ TK A   F+  C GQQQ++ DMQ M+ SL +LH++LR+ Q N   A ++  CLS+IPVVGG +AGA+LA  ++ FG++ +   +     +   LSVD+S  +++  L S  F++KLDPV +KRV+ VV+ ++FR++  +Q  +  ++ +L+    D S T + E+ +
Sbjct:  686 DPRAKNDAGEYAVSLVSCDSKLATELRLVGPQARASNALEQLWITYASSVPPKNELLAALRSDQITSFSSFIMAHNLLLLAVRQRIIRKEEVRLLGGSRDYILHEVYLPVTKVDLTQEQKCLVAKVLSYAEKLGFIRDA--TFVKVVAELRSEIRESNIQLQTALVTVARKINSIDQRVDTLEKWTKQAAEEFRKACEGQQQMVKDMQRMSTSLNELHSLLRKHQRNRMIAGILSSCLSIIPVVGGAIAGATLATCDLGFGITYEQASALGITGLLAFLSVDLSSFQSIGTLTSKEFLSKLDPVVQKRVDTVVKHSKFRTVARLQNEVNVMMNDLEMGDMDLSATDDEEVEL 1035
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BLAST of Ggra5437.t1 vs. uniprot
Match: A0A1M7UD43 (Ankyrin repeat n=2 Tax=Bradyrhizobium erythrophlei TaxID=1437360 RepID=A0A1M7UD43_9BRAD)

HSP 1 Score: 65.9 bits (159), Expect = 6.330e-8
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0 
Query:   46 SAAEHGDLQLVSELLDRGIDVNSISKSSGLTALLVASMNGQTETVEALLERGADIHVKKK 105
            SAA  GDL  + +LL RG+DVN+ +  SG TAL+ AS+NGQTE V ALL +GA+++ K K
Sbjct:  184 SAARAGDLAAMQKLLARGVDVNATAYESGGTALMAASVNGQTEAVRALLRKGANVNAKDK 243
The following BLAST results are available for this feature:
BLAST of Ggra5437.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IV395.670e-7142.90Ankyrin repeat domain-containing protein 50 n=1 Ta... [more]
A0A1M7UD436.330e-855.00Ankyrin repeat n=2 Tax=Bradyrhizobium erythrophlei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 484..504
NoneNo IPR availableCOILSCoilCoilcoord: 367..387
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 44..183
coord: 103..208
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 106..138
score: 13.442684
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 139..165
score: 8.985412
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 73..105
score: 11.320173
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 107..122
score: 45.46
coord: 155..169
score: 33.83
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 139..168
e-value: 2.0
score: 17.4
coord: 39..68
e-value: 0.24
score: 20.5
coord: 73..102
e-value: 2.7E-4
score: 30.3
coord: 106..135
e-value: 2.9E-6
score: 36.8
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 45..137
e-value: 8.7E-16
score: 58.3
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 140..171
e-value: 0.0015
score: 18.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 73..105
score: 12.68942
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 39..71
score: 8.57608
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 139..171
score: 10.2321
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 106..138
score: 14.82622
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 17..252
e-value: 6.2E-46
score: 159.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 36..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:266013..269003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5437.t1Ggra5437.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 266013..269003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5437.t1 ID=Ggra5437.t1|Name=Ggra5437.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=532bp
MFRNLGNFIKPQHIFILCRAAIREFEREVAASRTHANTDHDHELCSAAEH
GDLQLVSELLDRGIDVNSISKSSGLTALLVASMNGQTETVEALLERGADI
HVKKKNGRTPLHSAALRGHVRVVAALLLHGANVHLSDDWGDTALHDAAER
KKMQVAEMLWKAGADPLAENNVGKTPLSLLPHGSQLAQQMRSKLPAPPVS
ELQQLWLDCKTSPLRASQLQAALRPENITSFSSVIIAHHLLLLAVRQRVL
TCSQIQNLGDSRDYILQNVYLPVTKLSRNDGQKLWASTLLSRAEKEGFIR
DGSGTLVKVVADLRSEIGHTSSETQQELISIAREVSSQQQRLVLSEQCTK
PAVHTFQNLCRGQQQVLSDMQNMAASLQQLHAVLREQQPNHAFAAVVGFC
LSMIPVVGGVLAGASLADQEVAFGLSVDLFYSDAEEAVKEILSVDISDIR
TVAILMSDGFVNKLDPVARKRVEAVVQQTEFRSLTNVQQSLETLVEELDD
SSKTKEAEIRVSANGITVRAKSPEKGIISKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf