Ggra542.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra542.t1
Unique NameGgra542.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length474
Homology
BLAST of Ggra542.t1 vs. uniprot
Match: A0A2V3IEV9 (APH domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV9_9FLOR)

HSP 1 Score: 707 bits (1826), Expect = 1.700e-253
Identity = 354/465 (76.13%), Postives = 397/465 (85.38%), Query Frame = 0
Query:    1 MQNIEHCIPEHEEHRYVAVLRSSGKFLVLKKSGSNKLTLPEVHFDCTPITSVEFLFELRKSLELDGDLHIIEEQRFYSDENDGSIIASLVVVEDTS-GMHISRNLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPSLSSRAKQDLPWYEIGFYSKVLPKIESILREKCIAITGSSEQFQFSYRAAIYRIRTSRGPVFVKFVSKTNKEIAKMNGIMHIVPHTRSFVFHSSSELNSFFCFDFGLSMNDLCFVPQCKKPVTGYEDQQVVASEILDQWASIQQNCVSRIADLTDAEIPIYDDKWIRCGLGQLETYVGQECGSLALQARLRSCCRYVDQTLSLWEKKGIPFTIVHGDLNETNVAQPHGPGSSYLFFDWETAFVGHPFLDLLDIEYHPLHRADMAYLKSWARYTNLAFSEVLEVAKWTKPMQFLVAAIAEMLEGVVPTESRKRLVHISVDDFVDCVETF 464
            +Q  E  +PE+E+H YVAVLRSSGK LVL+KS  ++  LPEVH DCTPIT+V+FL ELR SLE+DG+LHI+E QRFYS  ND  IIASLV+VED S  M +S NLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPS   R KQ LPWYEIGFY K+LPK++SIL+EK I IT S EQFQFSYRAAIYRI TSRG VFVKFVS TNKEIAKM+GI++IVPHT  FVFHSS ELNSFF FDFGLSMNDLCFV +CKK V GYEDQ  +ASE+L QWASIQQNCVSRIA+LT A+IPIYD+ WIR GL QLETYVGQ+  S   Q+RLRSC  +VD+TL+LWEK  I  TIVHGDLNETN+AQPHG GSSYLFFDWETAFVGHPFLDLLD+EYHPL+R++ AYL+SW+RYT L F EVLEVAKWTKPMQFLVAAIAEML+G+VP ESRKRLVHISV+ FV+CVETF
Sbjct:    6 VQREELYVPEYEQHNYVAVLRSSGKSLVLEKSSPSEFNLPEVHSDCTPITAVQFLVELRDSLEIDGELHIVEHQRFYSGGNDSYIIASLVIVEDISDSMIMSGNLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPSPYLRGKQHLPWYEIGFYPKMLPKMQSILQEKGIEITDSPEQFQFSYRAAIYRIPTSRGRVFVKFVSWTNKEIAKMSGILNIVPHTTDFVFHSSLELNSFFSFDFGLSMNDLCFVLRCKKAVAGYEDQHAIASEVLTQWASIQQNCVSRIAELTAAKIPIYDETWIRYGLEQLETYVGQDGVSSVFQSRLRSCHDHVDRTLALWEKIHIFLTIVHGDLNETNIAQPHGRGSSYLFFDWETAFVGHPFLDLLDVEYHPLYRSENAYLESWSRYTKLDFDEVLEVAKWTKPMQFLVAAIAEMLDGIVPIESRKRLVHISVEQFVECVETF 470          
BLAST of Ggra542.t1 vs. uniprot
Match: A0A2V3IH90 (APH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH90_9FLOR)

HSP 1 Score: 291 bits (745), Expect = 4.330e-90
Identity = 156/450 (34.67%), Postives = 250/450 (55.56%), Query Frame = 0
Query:   12 EEHRYVAVLRSSGKFLVLKKSGSNKLTLPEVHFDCTPITSVEFLFELRKSLELDGDLHIIEEQRFYSDENDGSIIASLVVVE-DTSGMHISRNLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPSLSSRAKQDLPWYEIGFYSKVLPKIESILREKCIAITGSSEQFQFSYRAAIYRIRTSRGPVFVKFVSKTNKEIAKMNGIMHIVPHTRSFVFHSSSELNSFFCFDFGLSMNDLCFVPQCKKPVTGYEDQQVVASEILDQWASIQQNCVSRIADLTDAEIPIYDDKWIRCGLGQLETYVGQECGSL-ALQARLRSCCRYVDQTLSLWEKKGIPFTIVHGDLNETNVAQPHGPGSSYLFFDWETAFVGHPFLDLLDIEYHPLHRADMAYLKSWARYTNLAFSEVLEVAKWTKPMQFLVAAIAEMLEGVVPTESRKRLVHISVDDFVD 459
            E+H YVA+L S+G  L++ ++G     LP     C  + S+++L  L +   ++  LHI+E+ +   ++ D     SLV+VE +  G       + +EWK   +     C       FL+ FL         +  LPW  +GFY KV   ++  L       TG  +Q +FSY + +YRI T+ G VFVK+VS+ + EI K + I   +P         +++LN+ F  DFG+ + D CF     +P  GYE+   V+  +L++WA  QQ   S +ADL    +P+ D++WI  GL ++ET+  +   S+  +  +L+    Y++    +W+   +P T+VHGDLNE+N+AQP GPG+S+LFFDWE +++GHPFLDLLD +++P+ R    +L+SWA+Y  ++  +  E+A WTKP+  LV AI E+    +P   RK  V   +  F++
Sbjct:   12 EDHHYVAILTSNGTRLLVDRTGECSFGLPSFVSHCDAVISIKYLSALSEHFGINKCLHIVEDVQCLEEQTDPRHDGSLVIVEVEDDGYCTLERFEHVEWKHLFRTDSLRCDCPYALGFLRGFLTQSGGVDMDRSLLPWCILGFYRKVYSSVDESLEGTSYVRTGCPQQVRFSYHSTVYRIPTATGYVFVKYVSEKSTEIPKTSVITGCLPEVSQSPMCINTKLNALFTVDFGMPLTDTCFA--MNRPAAGYENVLSVSGLVLERWARTQQQSSSFLADLVAGGVPVRDEEWIWRGLLRVETFANRNLSSVPGISCQLQFGRSYLECVFRVWKDIPLPNTLVHGDLNESNMAQPEGPGTSFLFFDWELSYIGHPFLDLLDEKWNPVFRGVGKFLESWAKYAGISLKKAEELAIWTKPVGHLVTAIIELENPSLPEVFRKSSVSSGIQSFIE 459          
BLAST of Ggra542.t1 vs. uniprot
Match: R7Q9W5 (APH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W5_CHOCR)

HSP 1 Score: 66.6 bits (161), Expect = 5.990e-8
Identity = 71/329 (21.58%), Postives = 133/329 (40.43%), Query Frame = 0
Query:  100 ISRNLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPSLSSRA-KQDLPWYEIGFYSKVLPKIESILREKCIAITGSSEQFQFSYRAAIYRIR-------TSRGP-----VFVKFVSKTNKEIAKMNGIMHIVPHTRSFVFHSSSELNSFFCFDFGLSMNDLCFVPQCKKPVTGYEDQQVVASEILDQWASIQQNCVSRIADLTDAEIPIYDDKWIRCGLGQ-LETYVGQECGSLALQARLRSCCRYVDQTLSLWEKKGIPFTIVHGDLNETNVAQPHGPGSSYLFFDWETAFVGHPFLDLL------DIEYHPLHRADMAYLKSWARY 408
            + R L+ IE+K+  +   +V  H      L S + D   +SR  K  +PW   G++ +    I ++L+E  + +       + ++ + + R         TS  P     ++VK +     + A M  ++H V    +    + +E  +            +C     ++ V       +    ++   A + +  V  +  L  A +P+Y  KW+   + + L   +  E G     A+LR+    ++  L      GIP T++HGDL+  N+       S +  FDW +A++GHPF D +      D        A+  Y + W  Y
Sbjct:  454 VPRGLEWIEYKEALESPWKVIGHELEPRSLLSAIVDDISNSRLPKNRVPWRSSGWFKETANWITAVLQENNMKLEQPIAIMRNTFASCVLRCHVRPFVEPTSGAPRKDDILYVKALHSRLLK-ASMIAVIHEVVTEIAPAMVAVNEARN------------MCM----ERSVASSRCPSINTELLMKTIAGVHKRSVPHLEVLKHAGVPVYTAKWLLSNVKEILGCSLVIESGDNVSVAKLRANVPRLESCLKELSSYGIPHTLLHGDLHSLNIGDAVD-NSFHHIFDWNSAYIGHPFSDFVVTRFSEDDPEDEQELAEKVYFQYWREY 764          
The following BLAST results are available for this feature:
BLAST of Ggra542.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEV91.700e-25376.13APH domain-containing protein n=2 Tax=Gracilariops... [more]
A0A2V3IH904.330e-9034.67APH domain-containing protein n=1 Tax=Gracilariops... [more]
R7Q9W55.990e-821.58APH domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002575Aminoglycoside phosphotransferasePFAMPF01636APHcoord: 329..389
e-value: 3.3E-6
score: 27.1
NoneNo IPR availableGENE3D3.90.1200.10coord: 262..451
e-value: 7.2E-7
score: 31.1
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 293..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000153_piloncontigtig00000153_pilon:15696..17117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra542.t1Ggra542.t1Gracilaria gracilis GNS1m malemRNAtig00000153_pilon 15696..17117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra542.t1 ID=Ggra542.t1|Name=Ggra542.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=474bp
MQNIEHCIPEHEEHRYVAVLRSSGKFLVLKKSGSNKLTLPEVHFDCTPIT
SVEFLFELRKSLELDGDLHIIEEQRFYSDENDGSIIASLVVVEDTSGMHI
SRNLQSIEWKQCPQVLEQVCKHSAVSDFLQSFLHDPSLSSRAKQDLPWYE
IGFYSKVLPKIESILREKCIAITGSSEQFQFSYRAAIYRIRTSRGPVFVK
FVSKTNKEIAKMNGIMHIVPHTRSFVFHSSSELNSFFCFDFGLSMNDLCF
VPQCKKPVTGYEDQQVVASEILDQWASIQQNCVSRIADLTDAEIPIYDDK
WIRCGLGQLETYVGQECGSLALQARLRSCCRYVDQTLSLWEKKGIPFTIV
HGDLNETNVAQPHGPGSSYLFFDWETAFVGHPFLDLLDIEYHPLHRADMA
YLKSWARYTNLAFSEVLEVAKWTKPMQFLVAAIAEMLEGVVPTESRKRLV
HISVDDFVDCVETFNAGDVESKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002575Aminoglycoside_PTrfase
IPR011009Kinase-like_dom_sf