Ggra5406.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5406.t1
Unique NameGgra5406.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1213
Homology
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BLAST of Ggra5406.t1 vs. uniprot
Match: A0A2V3IQB0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQB0_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 3.440e-37
Identity = 113/405 (27.90%), Postives = 198/405 (48.89%), Query Frame = 0 
Query:    7 VLVRTKDLHIIEERSRSSALRSENEVVVDTLLKEFNEFGIDSNRLGIITITLHDH--PSGIPELFETFSREQLRKIRVWNMLEEVKLSLASFPVLRTSF--PKDLGFV-FSDGRHRLAAVSRY-RSQVKKTGKEDVETYFHVRMLFDCGEVKSRRVSLHESRPIITNATCVTDVMKCLPSPGSAFAGVKEVLNDKNFHKKLMLPDTDTLRKVIVLSYALFPEAKVLMEKNRESKLFETLAIIQPKKSVMNFLSGIENVCVFTPKRSLGRDLFRGCSMRFKKKAQMSVFGTVIGTHSANSTYRASGLLNRIALSFLIEFPRNLPYAEMDENEEETVIWKTIATLLRSRILRDKSQAKLSDILRFASSAICS--VSRNMFQLLPNNSQAMDTILSRKVPGASSAGTR 403
            VL+    L  I+E S++ +LR  +E +V   + +FNE+G+D  RLG++ I        SG    F +     L++I VWN+ ++V  +L     +      P  L  + FSDGRH+ AAV ++       T +E  +TY  V+ + DC E ++R +SL  SR ++     +TDVM C+P PG   A +K  + D+   +KLMLPD++++R+ + LS+ L+P +K LM+  R + LF T  +++        +     + +   + S         S+  K++ Q+ +    I           + LL R +  FL   P  L +  + E EEET+   ++   L+    R  +Q+ +  ++  A   I +  +S N+F     N    + +L++++P   S  TR
Sbjct:   16 VLLTAAQLRFIKENSKARSLRMVSEEIVKKFVGDFNEYGLDPIRLGLLVIAFEAKLIHSGF---FRSIYMAALKQINVWNIRKQVLHNLHEVQTISVDGVDPNMLRCMKFSDGRHQFAAVQKFILENGVLTPEEFDQTYVQVQFVPDCTENEARIISLQRSRTVLVTTPGITDVMNCMPHPGVGLAKLKSYIKDEATARKLMLPDSESVRRALSLSFGLYPSSKALMKLFRCTNLFSTSILLRKNHGFYQLVVSTTPLPLVLSRYSAVLSKLHKASLTLKERCQLVLIAFAISICMFGINANENELLGRFSKCFLEAVPSGLEFEHISEIEEETIALSSMHFCLKDTFKRFLAQSHVPHVIEKAKKVIRAFPMSSNLFH---ENDLWSEKVLTKELPRLESTETR 414
The following BLAST results are available for this feature:
BLAST of Ggra5406.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQB03.440e-3727.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 569..589
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 557..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 709..729
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..528

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000099_piloncontigtig00000099_pilon:276089..279727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5406.t1Ggra5406.t1Gracilaria gracilis GNS1m malemRNAtig00000099_pilon 276089..279727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5406.t1 ID=Ggra5406.t1|Name=Ggra5406.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1213bp
MSGEQYVLVRTKDLHIIEERSRSSALRSENEVVVDTLLKEFNEFGIDSNR
LGIITITLHDHPSGIPELFETFSREQLRKIRVWNMLEEVKLSLASFPVLR
TSFPKDLGFVFSDGRHRLAAVSRYRSQVKKTGKEDVETYFHVRMLFDCGE
VKSRRVSLHESRPIITNATCVTDVMKCLPSPGSAFAGVKEVLNDKNFHKK
LMLPDTDTLRKVIVLSYALFPEAKVLMEKNRESKLFETLAIIQPKKSVMN
FLSGIENVCVFTPKRSLGRDLFRGCSMRFKKKAQMSVFGTVIGTHSANST
YRASGLLNRIALSFLIEFPRNLPYAEMDENEEETVIWKTIATLLRSRILR
DKSQAKLSDILRFASSAICSVSRNMFQLLPNNSQAMDTILSRKVPGASSA
GTRAQIPAVVPNASLSANGSVSDFVDSSGGHISSERRREPPSAEHQSPET
EEKIKGGRKSRIENLKEPFAENESNKIIDEREKGKKDNRKGGTGTLEGSF
ADDQLQKNTAVERDKVVKDGRGPGIQMKKDSFACQSKKIVDEVAVQSNGT
AGSRKGGEKLSTDRIEKPNEEEELGVEELEESVEDVQAKKPVAGGAMRSE
SYTESKRFSQGGEHLSSDRMKETTGEEQNGIAACKGTTEDTQSNSIEIVD
EELEQTKETVESGDEAESVNSTVERLEEEKVEGQPGIDVLNDSVDEDLSS
SIQIVDEGATHKKQALQRRRGTKRRLSNSSGGRRATKQKLFSINTNDKER
CLYECVQFAMALDEWFQVLSIRFGGKERLLAHVPKVLAHQKVAFFDTNEF
WRKGLQAEDALAECVDDGLIFDYLVDIRRSASECIPETISISGIVYTKRR
LFLVAEKDWNLFSNPKNIGMLAIVYDLHQAEASGPHTDICVWSGKEDESF
LCEVFRNLTKAPCAVFDFTCSDLFLMKSLCQDRDLIPLISKMYRAMPYSY
GAEYRRCYDFLRDRCLEGCDCGGHDVLRDLPNDAETVQNEGPWKPFHSLV
GESDKHVDFRVIPHASLLLRKVKNGKTPSIGDSDSALCGVQNDSNGAPLE
LGAFLSAKDVARITEMNVRARPVLLFPKAQLVDARTAMTDFSNFTSPFDL
RVLHISGVTNEHLWYFMNNDSVGSLLNTSHHDEDICVYLQENYKSRKDFE
MLAKQGVEAFMKPETAYLRIVLSVSRLNRRLRRSSDRDAYKCSVCGAVEL
FVSYGDEYVVPK*
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