Ggra5385.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5385.t1
Unique NameGgra5385.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length478
Homology
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BLAST of Ggra5385.t1 vs. uniprot
Match: A0A2V3ICK7 (Uncharacterized protein n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICK7_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 1.320e-12
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 0 
Query:   21 TCTAEESWRANLRDIEVSDPNFFTSDDAKLSRESSTWKERLAYDGLNATLANCLAVQRLYDVFYKAKELQQIGSEEEFHRLCSTVSQYLRLCVAHLFCAKDDVYRTEVLFVCVASLELTEGFMDFVLECRSARTALRKARHLRTVCRAAWEFMNTDHARSRLRSV 185
            T   E +WR  ++ ++  +P  F + +A++   +   +    Y G+    +NC  ++ + D F    E     SE     L +TVSQ+LR CVA+  C K DV++   LF  V++  L E F+ + LE  S RT   KA  L  +C AA   +N +  R +L  V
Sbjct:  173 TSRTEAAWRFRIKALKKKNPRIFDNKEARMEIRTKAKQGHTVYMGIGVDTSNCDGLRSVMD-FVCCPEFNLNPSERWKKELRTTVSQFLRWCVANSACHKYDVWKRSALFENVSNKTLVETFLGYFLERCSTRTFYSKAEQLSAICEAARPTLN-ESQRGKLGEV 335
The following BLAST results are available for this feature:
BLAST of Ggra5385.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ICK71.320e-1230.91Uncharacterized protein n=5 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 345..477
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000099_piloncontigtig00000099_pilon:100081..101514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5385.t1Ggra5385.t1Gracilaria gracilis GNS1m malemRNAtig00000099_pilon 100081..101514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5385.t1 ID=Ggra5385.t1|Name=Ggra5385.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=478bp
MDALRGVGMQSPTKTRKSSRTCTAEESWRANLRDIEVSDPNFFTSDDAKL
SRESSTWKERLAYDGLNATLANCLAVQRLYDVFYKAKELQQIGSEEEFHR
LCSTVSQYLRLCVAHLFCAKDDVYRTEVLFVCVASLELTEGFMDFVLECR
SARTALRKARHLRTVCRAAWEFMNTDHARSRLRSVSQYLTIVIDGIRSNS
ARSALITDPQCIPFDLLKKCMRTAMDTMSDWISWHKFESRSGVSLNQNQL
RGLVTEWTSAFIPFLVLCSGGQSPQVITHIQVPCDNTFKENIREAHRIGY
IRLSTLHGKRTLCLGLPEVILSDVALPYLGFHVFVILPTIYSLTKKVELQ
NGWRAMLVNKMTGDEIKSWRVAYEVKRFFSEVDPRFSNVTCKSLRSTCML
VLLGAFREKRLLNGRDESHFLDITARYFNTTKTQLRSNVGCRGSAAHRAT
AEELTMFLSKASEYEVRNRESNGDYHR*
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