Ggra5379.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5379.t1
Unique Name	Ggra5379.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	293

Homology

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BLAST of Ggra5379.t1 vs. uniprot
Match: A0A2V3J5C6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C6_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 6.400e-41
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 0

Query:  180 YDPYIATLTPADRKNLEPFGLEPSAFRRDLLKITSWPLAVTDLIGRPFEHPGFGRYASWQRWDSQRLAAVPMQPPKKDRESRHRPGRQACFQHRAHHSPFRFFIPDCIPIDL 291
            +DPY+   T  D  ++  FGL PS FRR+LL+ TSWP+ V++ +G+PF+HP F  Y+SW RWDS RLAA+P  PPK+D E+RHRPGR +CF HRAHHSPFR+FIP  IP DL
Sbjct:  156 HDPYVVVATTDDASHMGEFGLLPSDFRRELLQTTSWPIPVSEPLGQPFDHPDFSLYSSWIRWDSHRLAAIPHNPPKRDEETRHRPGRHSCFLHRAHHSPFRYFIPPTIPGDL 267

[Close]

BLAST of Ggra5379.t1 vs. uniprot
Match: A0A2V3J6V9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V9_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 1.150e-40
Identity = 88/198 (44.44%), Postives = 112/198 (56.57%), Query Frame = 0

Query:   97 YTTSTLSSP-SGIPMSGRGSXXXXXXXXXXXXXXGINKSITR----SXXXXXXXXXXXXSAKAPLGATASTSNTAQAISSVLLPGTGS-YDPYIATLTPADRKNLEPFGLEPSAFRRDLLKITSWPLAVTDLIGRPFEHPGFGRYASWQRWDSQRLAAVPMQPPKKDRESRHRPGRQACFQHRAHHSPFRFFIPDCIP 288
            Y    L  P S I MSGRGS              GI KS+TR                 S+  P    A   N    ++   L GTG  +DPY+ T T  D  ++  FGL PS FRR+LL+ TSWP+ V++ +G+PF+HP F  Y+S +RWDS  LAA+P  PPK+D+E+RHR GRQ+CF H AHHSPFR+FIP  IP
Sbjct:   72 YRRGALPQPVSQITMSGRGSCGPRGSRIGPRS--GITKSVTRLRGRGCGTSQVLPLPNQSSNMPASVLAELVNL---VAHGFLAGTGVLHDPYVPTATTEDASHMGEFGLLPSDFRRELLQTTSWPIPVSEPLGQPFDHPDFSLYSSGKRWDSHTLAAIPHNPPKRDKETRHRSGRQSCFLHEAHHSPFRYFIPPTIP 264

[Close]

BLAST of Ggra5379.t1 vs. uniprot
Match: A0A2V3IMH4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMH4_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 4.820e-34
Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 0

Query:  176 GTGS-YDPYIATLTPADRKNLEPFGLEPSAFRRDLLKITSWPLAVTDLIGRPFEHPGFGRYASWQRWDSQRLAAVPMQPPKKDRESRHRPGRQACFQHRAHHSPFRFFIPDCIPIDL 291
            GTG  +DPY+AT T  D   +    L PS FRR+LL+ TSWP+ V++ + +PF+HP F  Y+S  RW S RLAA+   PPK+D+E RHR GR +C  HRAHHSPFR+FIP  IP D+
Sbjct:   63 GTGVLHDPYVATATTEDASRMGASDLLPSDFRRELLQTTSWPIPVSEPLVQPFDHPDFSLYSSRNRWGSHRLAAILHNPPKRDKEKRHRRGRHSCSLHRAHHSPFRYFIPPTIPGDV 179

The following BLAST results are available for this feature:

BLAST of Ggra5379.t1 vs. uniprot

BLAST of Ggra5379.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3J5C6	6.400e-41	59.82	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3J6V9	1.150e-40	44.44	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IMH4	4.820e-34	53.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000099_pilon	contig	tig00000099_pilon:43119..43997 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5379.t1	Ggra5379.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000099_pilon 43119..43997 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5379.t1 ID=Ggra5379.t1|Name=Ggra5379.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=293bp
MADDEDPFGGEDIPVVDIVPDKRVEEVFVSSSTTFGLVGTPLSTDPITGL
NAALVLSLRSSAAPRVSHGVTTTDEGGENPMTIVVSAAPLGYKGARYTTS
TLSSPSGIPMSGRGSRGSRGSRGSSRGARGINKSITRSRSRGRGGRGRGL
SAKAPLGATASTSNTAQAISSVLLPGTGSYDPYIATLTPADRKNLEPFGL
EPSAFRRDLLKITSWPLAVTDLIGRPFEHPGFGRYASWQRWDSQRLAAVP
MQPPKKDRESRHRPGRQACFQHRAHHSPFRFFIPDCIPIDLN*