Ggra5361.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5361.t1
Unique NameGgra5361.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length185
Homology
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A2V3IVX8 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVX8_9FLOR)

HSP 1 Score: 276 bits (706), Expect = 2.760e-92
Identity = 140/175 (80.00%), Postives = 156/175 (89.14%), Query Frame = 0
Query:    9 DNDFNTTDEQQQSPSLSQNSIFQDNLNPLQRATVWPPVNPNQPPVWLRTINTATETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSPRARAMQMAFG 183
            DN  N+ DE   +P LSQN IF D  NPLQ+  VWPP+NPNQPP+W+RTIN ATETC+FKA +SAVAGGGLGVLFGLFFGGYSNAVDKAVET+GPASLKLRVGFKEAAR+MRSY+KNFA+FGASFS +ECTVEK+RARHDIWNSVIGGCAAGAFMSSAPSE++  RARA QMAFG
Sbjct:   13 DNFSNSADE---APPLSQNPIFNDR-NPLQQPMVWPPLNPNQPPLWIRTINNATETCIFKASMSAVAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSVSECTVEKLRARHDIWNSVIGGCAAGAFMSSAPSERIPHRARAAQMAFG 183          
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A5J4Z0J1 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0J1_PORPP)

HSP 1 Score: 147 bits (372), Expect = 7.970e-42
Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 0
Query:   58 INTATETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSPRARAMQMA 181
            +N   E+C FKA +S VAGGG+G+ FGL FGGY+ AVD+AVE+ G    + RVGFK A RAM SY+K+FA++GA FS++EC +E  RARHDIWNSV  GC  GA ++SAP + +  +AR  QMA
Sbjct:   42 LNAVGESCAFKALLSTVAGGGIGLFFGLLFGGYAQAVDEAVESKGTTVQRFRVGFKSAGRAMGSYAKSFAIWGAVFSSSECAIESYRARHDIWNSVAAGCVTGATLASAPKQSIGAKARIQQMA 165          
BLAST of Ggra5361.t1 vs. uniprot
Match: M1VHJ2 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHJ2_CYAM1)

HSP 1 Score: 134 bits (336), Expect = 2.100e-36
Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = 0
Query:   63 ETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSPRARAMQMAFG 183
            E+C FKA  +A+AGGGLGV  GLF GG+S  +D+AVE   P   +LR   K  A  +R+YSKNFAL+GA+++ AEC+VEK RARHD+WNS+I GCA GA ++S P   +S R R  QM+ G
Sbjct:   43 ESCAFKAVAAAIAGGGLGVALGLFIGGFSAELDRAVEAQSPWREQLRAYGKALAAQIRTYSKNFALWGATYTIAECSVEKYRARHDLWNSLIAGCATGAVLASQPRASMSARTRGQQMSVG 163          
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A7J7IQZ2 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQZ2_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 9.520e-35
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 0
Query:   56 RTINTATETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSPRARAMQMAFG 183
            R      E+C FKA  +A+AGGGLGV  GLF GG+S  +D+ VE   P   +LR   +  A  +R+YSKNFAL+GA+++  EC+VEK RARHD+WNS+I GC  GA ++S P  ++S R R  QM+ G
Sbjct:   36 RIAEALLESCAFKAAAAAIAGGGLGVALGLFVGGFSTELDRTVEAQAPWRQQLRAYGRALAAQIRTYSKNFALWGATYTITECSVEKYRARHDLWNSLIAGCMTGAVLASQPRTQMSLRTRGQQMSVG 163          
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A1X6NRT5 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRT5_PORUM)

HSP 1 Score: 124 bits (311), Expect = 2.640e-33
Identity = 64/109 (58.72%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   76 GGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSP-RARAMQMAFG 183
            GGGLG+  GL FGGY++ VD+AVE  GP   KLRVGF  A  +M  YS++FA  GA F+  +C VEK RARHD+WNS++GGCAAGA +SSAP  +  P RARA  MA G
Sbjct:    2 GGGLGLFAGLLFGGYASGVDRAVEMKGPMRAKLRVGFAAAGTSMAEYSRSFARLGAVFALCDCAVEKARARHDLWNSLLGGCAAGAALSSAPRTRGVPARARAGNMALG 110          
BLAST of Ggra5361.t1 vs. uniprot
Match: R7QDQ1 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDQ1_CHOCR)

HSP 1 Score: 94.7 bits (234), Expect = 2.850e-22
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 0
Query:  119 MRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSPRARAMQMAFG 183
            M SY+K+FA+FG  FS AECTVEK+RARHDIWNS+IGGC  GA MSS P + +  RARA QMA G
Sbjct:    1 MSSYAKSFAMFGLVFSGAECTVEKVRARHDIWNSIIGGCVTGAVMSSQPRQSIPHRARASQMAVG 65          
BLAST of Ggra5361.t1 vs. uniprot
Match: M2XRN2 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRN2_GALSU)

HSP 1 Score: 90.5 bits (223), Expect = 1.260e-19
Identity = 49/126 (38.89%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   58 INTATETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSSAPSEKLSPRARAMQMAFG 183
            I  A E+C+FK+ +S VA                   D AVET G A  KL  G + A  A    +K FAL+G  +S  EC +EK RA+HD+WNS++ GC  G  ++S P   +  +ARA QM+ G
Sbjct:   26 IEKAMESCLFKSMMSGVAXXXXXXXXXXXXXXXXXXXDTAVETQGTAKQKLLAGGRVAKNACVRQAKTFALWGTVYSGTECAIEKYRAKHDLWNSLVAGCITGGVLTSQPKIPMGAKARATQMSVG 151          
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A0G4IP81 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IP81_PLABS)

HSP 1 Score: 82.0 bits (201), Expect = 1.730e-16
Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 0
Query:   46 VNPNQPPVWLRTINTAT----ETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPAS-LKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSS 165
            V P+ P   +R  + AT    E C  K   S +AGG +G++FGL  G + +++  + E     S  K+R+  K+     +S+ KNFA+ G  +SA EC +EK RA+HD++N  + GC  GA +S+
Sbjct:    7 VPPSLPKERMRPADQATMNAMENCAVKGVFSGLAGGAMGLVFGLMMGSFDHSMSMSEEYQAADSRTKIRMTMKDMVAKSKSWGKNFAVVGLIYSATECFIEKQRAKHDLYNVAMAGCVTGAALSA 131          
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A453NA19 (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453NA19_AEGTS)

HSP 1 Score: 81.6 bits (200), Expect = 2.920e-16
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   63 ETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSS 165
              C  ++ +S V GGGLGVL GLFFG   N +   +  +  A  ++    K+  R   S++K FA+ G  FSAAEC VEK RA+HDI NS + GC  G  +++
Sbjct:   37 NNCAVRSVLSGVMGGGLGVLMGLFFGALENPI---MSEEMTARQQIVYQAKQMGRKSMSHAKTFAVMGLIFSAAECVVEKARAKHDITNSAVAGCVTGGALAA 136          
BLAST of Ggra5361.t1 vs. uniprot
Match: A0A453IAE9 (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IAE9_AEGTS)

HSP 1 Score: 81.3 bits (199), Expect = 3.750e-16
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   63 ETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVETDGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSS 165
              C  ++ +S V GGGLGVL GLFFG   N +   +  +  A  ++    K+  R   S++K FA+ G  FSAAEC VEK RA+HDI NS + GC  G  +++
Sbjct:   39 NNCAVRSVLSGVMGGGLGVLMGLFFGALENPI---MAEEMTARQQIVYQAKQMGRKSMSHAKTFAVMGLIFSAAECVVEKARAKHDITNSAVAGCVTGGALAA 138          
The following BLAST results are available for this feature:
BLAST of Ggra5361.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVX82.760e-9280.00Mitochondrial import inner membrane translocase su... [more]
A0A5J4Z0J17.970e-4256.45Mitochondrial import inner membrane translocase su... [more]
M1VHJ22.100e-3654.55Mitochondrial import inner membrane translocase su... [more]
A0A7J7IQZ29.520e-3549.22Mitochondrial import inner membrane translocase su... [more]
A0A1X6NRT52.640e-3358.72Mitochondrial import inner membrane translocase su... [more]
R7QDQ12.850e-2267.69Mitochondrial import inner membrane translocase su... [more]
M2XRN21.260e-1938.89Mitochondrial import inner membrane translocase su... [more]
A0A0G4IP811.730e-1636.00Mitochondrial import inner membrane translocase su... [more]
A0A453NA192.920e-1641.75Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A453IAE93.750e-1641.75Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 65..182
e-value: 2.0E-24
score: 86.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 60..166
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 60..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:279925..280566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5361.t1Ggra5361.t1Gracilaria gracilis GNS1m malemRNAtig00000172_pilon 279925..280566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5361.t1 ID=Ggra5361.t1|Name=Ggra5361.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=185bp
MSEPFSSPDNDFNTTDEQQQSPSLSQNSIFQDNLNPLQRATVWPPVNPNQ
PPVWLRTINTATETCVFKAGISAVAGGGLGVLFGLFFGGYSNAVDKAVET
DGPASLKLRVGFKEAARAMRSYSKNFALFGASFSAAECTVEKIRARHDIW
NSVIGGCAAGAFMSSAPSEKLSPRARAMQMAFGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22