Ggra5360.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5360.t1
Unique NameGgra5360.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length133
Homology
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A7R9UK22 (Acyl carrier protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UK22_DIALT)

HSP 1 Score: 112 bits (280), Expect = 2.190e-29
Identity = 64/126 (50.79%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    7 RSVVSAARIASRQMMRSPIQPSYACFKATNIHSFSRSFAAEAGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            R++ SAAR ++      P + + A   A       RSFA    F D+ +V+DR+L +V+ FEKV P KVT  SHFV+DLGLDSLDTVE+VMA EDEF +EI D+EAEKI TC DAI ++  + H K
Sbjct:   16 RALASAARRSAATRAFDPSRLAPAAMGA-------RSFAT---FLDRADVTDRVLGVVKSFEKVDPAKVTAKSHFVSDLGLDSLDTVEVVMAFEDEFTLEIEDKEAEKIQTCEDAINFICAHPHAK 131          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A1X6P9L8 (Acyl carrier protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9L8_PORUM)

HSP 1 Score: 109 bits (273), Expect = 5.820e-28
Identity = 53/88 (60.23%), Postives = 68/88 (77.27%), Query Frame = 0
Query:   45 AAEAGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            +A  G+ DK  V++R+L++V+KFEKV   KVT  SHF  DLGLDSLDTVELVM LEDEF IEI+DE AEKI++  DA+ ++AGN + K
Sbjct:   74 SAPVGYLDKASVTERVLDVVKKFEKVDAAKVTPDSHFTGDLGLDSLDTVELVMGLEDEFAIEIADESAEKIVSVADAVDFIAGNANAK 161          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A7S1TI15 (Acyl carrier protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI15_9RHOD)

HSP 1 Score: 110 bits (274), Expect = 1.040e-27
Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0
Query:   45 AAEAGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            AA AGF  + EV +R+L +VR FEKV P++VT  SHF NDLGLDSLDTVELVMA+E+EF IEI D +A+KI+TC DA+ Y++ N + K
Sbjct:  109 AASAGFLAQEEVQERVLMVVRNFEKVAPDQVTADSHFTNDLGLDSLDTVELVMAMEEEFAIEIPDADADKILTCKDAVGYISNNPNAK 196          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A7J7IM19 (Acyl carrier protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM19_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 5.470e-27
Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    8 SVVSAARIASRQMMRSPIQPSYACFKATNIHSFSRSFAAEAG-----FPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            ++++ AR  +R ++R   Q S+   +   +   SR ++AEAG     + D+ +V +R+L +VR FEKV   KVT  +HFV DL LDSLDTVELVMA EDEF IEI D  AEKI++  DA+ YVA N H K
Sbjct:    2 TLITVARSVAR-LLRLGKQNSFGFCRRDGVAG-SRDWSAEAGSGGSIYLDRNQVLERVLNVVRNFEKVDASKVTPDAHFVKDLALDSLDTVELVMAFEDEFAIEIPDAAAEKILSVADAVEYVANNAHAK 129          
BLAST of Ggra5360.t1 vs. uniprot
Match: M2Y536 (Acyl carrier protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y536_GALSU)

HSP 1 Score: 107 bits (266), Expect = 7.800e-27
Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
Query:   52 DKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            D  EV+DR+L +V+KFEKV P KVT +SHFVNDLGLDSLDTVELVMA EDEF IEI D +A+KI++C D I Y++ + + K
Sbjct:   87 DPKEVADRVLSVVKKFEKVDPSKVTPNSHFVNDLGLDSLDTVELVMAFEDEFAIEIPDSDADKILSCEDMIKYISSHHNAK 167          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A1Y1IJQ9 (Acyl carrier protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJQ9_KLENI)

HSP 1 Score: 106 bits (264), Expect = 7.880e-27
Identity = 63/142 (44.37%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    2 LSPSLRSVVSAARIASRQMMRSPIQPSY---------ACFKATNIHSFSRSFA--AEAGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            +S +LR  V+AAR +  Q +R  + P+          + F         R FA  A+  + DKG+V+DR+L +V+ F+KV+P KVT ++HF  DLGLDSLDTVE+VMA E+EF IEI D EA+KI++  DAI +VA +   K
Sbjct:    1 MSGALRPAVAAARASLLQHLRVGVTPALHTAGGLPGQSVFDGLCSILAPRYFADAAKGTYLDKGQVTDRVLSVVKNFQKVEPSKVTPTAHFTKDLGLDSLDTVEVVMAFEEEFGIEIPDSEADKILSTADAIEFVASHPQAK 142          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A176VPI4 (Acyl carrier protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VPI4_MARPO)

HSP 1 Score: 105 bits (262), Expect = 1.260e-26
Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 0
Query:   48 AGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            A + DK EV+DR+L LV+K EKV P KV  +SHF NDLGLDSLDTVE+VMA E+EF+IEI D EA+KI +C DAI Y+A     K
Sbjct:   50 ATYLDKTEVTDRVLALVKKMEKVDPAKVEPTSHFQNDLGLDSLDTVEIVMAFEEEFHIEIPDSEADKIFSCQDAIQYIASQPRAK 134          
BLAST of Ggra5360.t1 vs. uniprot
Match: M1VM39 (Acyl carrier protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VM39_CYAM1)

HSP 1 Score: 103 bits (258), Expect = 4.420e-26
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 0
Query:   41 SRSFAAEAG-----FPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            +RS+++EAG     F D+ +V +R+L +VR FEKV   KVT  +HFV DL LDSLDTVELVMA EDEF IEI D  AEKI++  DA+ YV  N H K
Sbjct:   33 TRSWSSEAGSGGSVFLDRKDVLERVLNVVRNFEKVDASKVTPDAHFVKDLALDSLDTVELVMAFEDEFAIEIPDAAAEKILSVADAVEYVTNNAHAK 129          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A7S2LP29 (Acyl carrier protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LP29_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.680e-26
Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 0
Query:   39 SFSRSFAAEAGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGNVHTK 132
            +FSR FA    F D GEV++RI+++V+ F+KV P KV  SS FV+DLGLDSLDTVE+VMA+EDEF IEI D EA+KI +  DA  Y+A +   K
Sbjct:   38 NFSRGFAGGTSFLDAGEVTERIVQVVKNFDKVDPAKVHASSKFVDDLGLDSLDTVEVVMAIEDEFAIEIPDVEADKIASITDATEYIAAHPMAK 131          
BLAST of Ggra5360.t1 vs. uniprot
Match: A0A388K529 (Acyl carrier protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K529_CHABU)

HSP 1 Score: 105 bits (263), Expect = 8.550e-26
Identity = 48/89 (53.93%), Postives = 69/89 (77.53%), Query Frame = 0
Query:   40 FSRSFAAEAGFPDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALEDEFNIEISDEEAEKIMTCGDAITYVAGN 128
            F    AA+  + DK EV+DR+L +VRKF+K + +K++  +HF++DLGLDSLDTVE+VMA E+EF  EI D+EA+K+++C DAI Y+A N
Sbjct:   53 FGGEHAAKGSYLDKEEVTDRVLSVVRKFDKAKKDKISPEAHFISDLGLDSLDTVEVVMAFEEEFGFEIPDKEADKLLSCRDAIEYIASN 141          
The following BLAST results are available for this feature:
BLAST of Ggra5360.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9UK222.190e-2950.79Acyl carrier protein n=2 Tax=Diacronema lutheri Ta... [more]
A0A1X6P9L85.820e-2860.23Acyl carrier protein n=1 Tax=Porphyra umbilicalis ... [more]
A0A7S1TI151.040e-2761.36Acyl carrier protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J7IM195.470e-2747.69Acyl carrier protein n=1 Tax=Cyanidiococcus yangmi... [more]
M2Y5367.800e-2764.20Acyl carrier protein n=2 Tax=Galdieria sulphuraria... [more]
A0A1Y1IJQ97.880e-2744.37Acyl carrier protein n=1 Tax=Klebsormidium nitens ... [more]
A0A176VPI41.260e-2662.35Acyl carrier protein n=2 Tax=Marchantia polymorpha... [more]
M1VM394.420e-2656.70Acyl carrier protein n=1 Tax=Cyanidioschyzon merol... [more]
A0A7S2LP294.680e-2657.45Acyl carrier protein n=1 Tax=Leptocylindrus danicu... [more]
A0A388K5298.550e-2653.93Acyl carrier protein n=1 Tax=Chara braunii TaxID=6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)TIGRFAMTIGR00517TIGR00517coord: 55..128
e-value: 2.0E-27
score: 92.9
IPR003231Acyl carrier protein (ACP)PANTHERPTHR20863ACYL CARRIER PROTEINcoord: 8..128
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 55..129
score: 18.551611
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 58..120
e-value: 1.8E-12
score: 47.4
IPR009081Phosphopantetheine binding ACP domainPROSITEPS50075CARRIERcoord: 54..129
score: 21.911573
IPR036736ACP-like superfamilyGENE3D1.10.1200.10coord: 50..132
e-value: 2.6E-29
score: 103.3
IPR036736ACP-like superfamilySUPERFAMILY47336ACP-likecoord: 53..129
NoneNo IPR availablePANTHERPTHR20863:SF64ACYL CARRIER PROTEIN, MITOCHONDRIALcoord: 8..128
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 84..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:278733..279236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5360.t1Ggra5360.t1Gracilaria gracilis GNS1m malemRNAtig00000172_pilon 278733..279236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5360.t1 ID=Ggra5360.t1|Name=Ggra5360.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MLSPSLRSVVSAARIASRQMMRSPIQPSYACFKATNIHSFSRSFAAEAGF
PDKGEVSDRILELVRKFEKVQPEKVTESSHFVNDLGLDSLDTVELVMALE
DEFNIEISDEEAEKIMTCGDAITYVAGNVHTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR009081PP-bd_ACP
IPR036736ACP-like_sf
IPR006162Ppantetheine_attach_site